RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 PLEKHA4Q9H4M7 779 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 TAF1DQ9H5J8 278 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 LZTFL1Q9NQ48 299 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 PLCB1Q9NQ66 1216 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 DUSP22Q9NRW4 184 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 EXOC1Q9NV70 894 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 HAUS2Q9NVX0 235 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 TMOD4Q9NZQ9 345 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 ABT1Q9ULW3 272 aaKnown RBP4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 SLC12A4Q9UP95 1085 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 LRCH1Q9Y2L9 728 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 SH3GLB1Q9Y371 365 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 LRRC42Q9Y546 428 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 FAM237AA0A1B0GTK4 181 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 BTBD19C9JJ37 291 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 F8VZ95 297 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 AGPSO00116 658 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 SPTLC2O15270 562 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 PPIP5K2O43314 1243 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 TPD52L2O43399 206 aaKnown RBP4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 CYTH3O43739 400 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 PPP6R2O75170 966 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 ATP6V1G1O75348 118 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 DNAJB5O75953 348 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 DDNO94850 711 aaPredicted RBP4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 ZFYP08048 801 aaPredicted RBP4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 PDHBP11177 359 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 ZNF24P17028 368 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 CALB2P22676 271 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 LOXL3P58215 753 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 LILRA4P59901 499 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 CYP4F2P78329 520 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 PHEXP78562 749 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 PDE1BQ01064 536 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 AMPD3Q01432 767 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 SULT2A1Q06520 285 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 PDCLQ13371 301 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 CUL1Q13616 776 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 NECTIN1Q15223 517 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 LONRF3Q496Y0 759 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 ANKRD20A2Q5SQ80 823 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 ARHGAP40Q5TG30 622 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 ANKRD20A1Q5TYW2 823 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 ANKRD20A3Q5VUR7 823 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 TOGARAM2Q6ZUX3 1019 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 USP45Q70EL2 814 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 UNC13DQ70J99 1090 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 HOOK3Q86VS8 718 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 SLC35F6Q8N357 371 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 NME8Q8N427 588 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 LRRC71Q8N4P6 559 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 ZBTB8BQ8NAP8 495 aaPredicted RBP4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 IFT81Q8WYA0 676 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 CCT6BQ92526 530 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 KIFAP3Q92845 792 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 SLF1Q9BQI6 1058 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 NUP58Q9BVL2 599 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 TIPINQ9BVW5 301 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 RAB17Q9H0T7 212 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 PNPOQ9NVS9 261 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 THEGQ9P2T0 379 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 SSX2IPQ9Y2D8 614 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 ZNF510Q9Y2H8 683 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 TBC1D30Q9Y2I9 924 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 C2CD2Q9Y426 696 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 CACNA1FO60840 1977 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 CASP8AP2Q9UKL3 1982 aa4.81□□□□□ -1.64
PDLIM5-211ENST00000508531 PALLDQ8WX93 1383 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 PASKQ96RG2 1323 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 MAGEA13PA6NCF6 341 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 TMEM110-MUSTN1A8MSY1 372 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 ALG1L2C9J202 215 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 DIAPH2O60879 1101 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 ZBED4O75132 1171 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 TACC1O75410 805 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 MOSPD3O75425 235 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 KRT38O76015 456 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 MAP4K4O95819 1239 aaPredicted RBP4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 ONECUT2O95948 504 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 CLTAP09496 248 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 LINGO3P0C6S8 592 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 FAM200BP0CF97 657 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 HDCP19113 662 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 S100A1P23297 94 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 SYKP43405 635 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 RECQLP46063 649 aaPredicted RBP4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 GNAQP50148 359 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 ITGB3BPQ13352 177 aaPredicted RBP4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 MTX1Q13505 466 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 SNX1Q13596 522 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 KARSQ15046 597 aaKnown RBP4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 CLPPQ16740 277 aaPredicted RBP4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 HSP90AA5PQ58FG0 334 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 WDR78Q5VTH9 848 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 C8orf74Q6P047 294 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 CATIPQ7Z7H3 387 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 PHLDB2Q86SQ0 1253 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 TMEM110Q86TL2 294 aa4.8□□□□□ -1.64
PDLIM5-211ENST00000508531 FAM228AQ86W67 206 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms