RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 HOXD12P35452 270 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 RECQLP46063 649 aaPredicted RBP9.6□□□□□ -0.87
DDX41-209ENST00000508279 LIMK1P53667 647 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 ARID5BQ14865 1188 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 PLEKHA7Q6IQ23 1121 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 RETSATQ6NUM9 610 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 C22orf39Q6P5X5 142 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 NCEH1Q6PIU2 408 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 LAYNQ6UX15 382 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 USP30Q70CQ3 517 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 ADAT2Q7Z6V5 191 aaKnown RBP9.6□□□□□ -0.87
DDX41-209ENST00000508279 RYBPQ8N488 228 aaPredicted RBP9.6□□□□□ -0.87
DDX41-209ENST00000508279 MINDY1Q8N5J2 469 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 AADATQ8N5Z0 425 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 PIP4K2CQ8TBX8 421 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 GRIN3AQ8TCU5 1115 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 NTAN1Q96AB6 310 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 TRIM11Q96F44 468 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 CCDC114Q96M63 670 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 EPAS1Q99814 870 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 TRIM7Q9C029 511 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 DHX35Q9H5Z1 703 aaKnown RBP9.6□□□□□ -0.87
DDX41-209ENST00000508279 SARDHQ9UL12 918 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 FZD10Q9ULW2 581 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 HPCAL4Q9UM19 191 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 AP4E1Q9UPM8 1137 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 FCF1Q9Y324 198 aaKnown RBP9.6□□□□□ -0.87
DDX41-209ENST00000508279 BZW2Q9Y6E2 419 aaKnown RBP9.6□□□□□ -0.87
DDX41-209ENST00000508279 SCINQ9Y6U3 715 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 PCDH15Q96QU1 1955 aa9.6□□□□□ -0.87
DDX41-209ENST00000508279 CNOT1A5YKK6 2376 aaKnown RBP9.59□□□□□ -0.87
DDX41-209ENST00000508279 SHROOM3Q8TF72 1996 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 CACNA1EQ15878 2313 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 KNL1Q8NG31 2342 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 TBC1D3DA0A087WVF3 549 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 TBC1D3IA0A087WXS9 549 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 TBC1D3EA0A087X179 549 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 TBC1D3KA0A087X1G2 549 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 TBC1D3FA6NER0 549 aaPredicted RBP9.59□□□□□ -0.87
DDX41-209ENST00000508279 LRRC72A6NJI9 287 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 TBC1D3LB9A6J9 549 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 KPNA3O00505 521 aaPredicted RBP9.59□□□□□ -0.87
DDX41-209ENST00000508279 ARHGAP33O14559 1287 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 DAPK3O43293 454 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 PRPSAP2O60256 369 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 OPHN1O60890 802 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 RAMP2O60895 175 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 TPM1P09493 284 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 TBC1D3HP0C7X1 549 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 GOT1P17174 413 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 L1CAMP32004 1257 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 CHRNA3P32297 505 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 SSR1P43307 286 aaKnown RBP9.59□□□□□ -0.87
DDX41-209ENST00000508279 MAPKAPK2P49137 400 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 CSNK1EP49674 416 aaKnown RBP9.59□□□□□ -0.87
DDX41-209ENST00000508279 GALCP54803 685 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 TPI1P60174 286 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 ARF5P84085 180 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 NRG1Q02297 640 aaPredicted RBP9.59□□□□□ -0.87
DDX41-209ENST00000508279 GRIK2Q13002 908 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 POLD3Q15054 466 aaPredicted RBP9.59□□□□□ -0.87
DDX41-209ENST00000508279 PPP6R3Q5H9R7 873 aaPredicted RBP9.59□□□□□ -0.87
DDX41-209ENST00000508279 CCDC122Q5T0U0 273 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 ARTNQ5T4W7 220 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 MANEALQ5VSG8 457 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 FAM46CQ5VWP2 391 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 PEAR1Q5VY43 1037 aaPredicted RBP9.59□□□□□ -0.87
DDX41-209ENST00000508279 HGSNATQ68CP4 663 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 KIAA0895LQ68EN5 471 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 TBC1D3GQ6DHY5 549 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 TBC1D3CQ6IPX1 549 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 PSAPL1Q6NUJ1 521 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 ZNF783Q6ZMS7 281 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 NLRP14Q86W24 1093 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 TBC1D3Q8IZP1 549 aaPredicted RBP9.59□□□□□ -0.87
DDX41-209ENST00000508279 NETO2Q8NC67 525 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 CHST14Q8NCH0 376 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 DNASE2BQ8WZ79 361 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 SYN2Q92777 582 aaPredicted RBP9.59□□□□□ -0.87
DDX41-209ENST00000508279 ARHGEF2Q92974 986 aaKnown RBP9.59□□□□□ -0.87
DDX41-209ENST00000508279 BIRC7Q96CA5 298 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 IQCDQ96DY2 449 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 BTBD6Q96KE9 485 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 TM6SF2Q9BZW4 377 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 THAP2Q9H0W7 228 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 DEF6Q9H4E7 631 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 CATSPERBQ9H7T0 1116 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 CAPN10Q9HC96 672 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 MRPL47Q9HD33 250 aaKnown RBP9.59□□□□□ -0.87
DDX41-209ENST00000508279 DYRK4Q9NR20 520 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 TMEM248Q9NWD8 314 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 ZNF212Q9UDV6 495 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 HS3ST2Q9Y278 367 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.59□□□□□ -0.87
DDX41-209ENST00000508279 SLCO1B1Q9Y6L6 691 aa9.59□□□□□ -0.87
DDX41-209ENST00000508279 A0A087X0T9 212 aa9.58□□□□□ -0.88
DDX41-209ENST00000508279 A0A1B0GVT2 93 aa9.58□□□□□ -0.88
DDX41-209ENST00000508279 TMEM191CA6NGB0 347 aa9.58□□□□□ -0.88
DDX41-209ENST00000508279 EEF2KO00418 725 aaKnown RBP9.58□□□□□ -0.88
DDX41-209ENST00000508279 MCF2LO15068 1137 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms