RNA–Protein interactions for RNA: ENST00000507900.5

DDX41-207, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 1,564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-207ENST00000507900 TRABDQ9H4I3 376 aa16.89■□□□□ 0.29
DDX41-207ENST00000507900 CCDC134Q9H6E4 229 aa16.89■□□□□ 0.29
DDX41-207ENST00000507900 ENTPD7Q9NQZ7 604 aa16.89■□□□□ 0.29
DDX41-207ENST00000507900 SMYD2Q9NRG4 433 aa16.89■□□□□ 0.29
DDX41-207ENST00000507900 INTS9Q9NV88 658 aaKnown RBP16.89■□□□□ 0.29
DDX41-207ENST00000507900 ZFP37Q9Y6Q3 630 aaPredicted RBP16.89■□□□□ 0.29
DDX41-207ENST00000507900 MIA3Q5JRA6 1907 aa16.88■□□□□ 0.29
DDX41-207ENST00000507900 IQANK1A0A1B0GTG1 560 aa16.88■□□□□ 0.29
DDX41-207ENST00000507900 LINC01553A4QN01 128 aa16.88■□□□□ 0.29
DDX41-207ENST00000507900 FOXO6A8MYZ6 492 aa16.88■□□□□ 0.29
DDX41-207ENST00000507900 GREM1O60565 184 aa16.88■□□□□ 0.29
DDX41-207ENST00000507900 PRAMEF11O60813 436 aa16.88■□□□□ 0.29
DDX41-207ENST00000507900 USP12O75317 370 aa16.88■□□□□ 0.29
DDX41-207ENST00000507900 ADRA1AP35348 466 aa16.88■□□□□ 0.29
DDX41-207ENST00000507900 CDH17Q12864 832 aa16.88■□□□□ 0.29
DDX41-207ENST00000507900 MPP3Q13368 585 aa16.88■□□□□ 0.29
DDX41-207ENST00000507900 NAB1Q13506 487 aa16.88■□□□□ 0.29
DDX41-207ENST00000507900 OLIG2Q13516 323 aa16.88■□□□□ 0.29
DDX41-207ENST00000507900 SPANXN3Q5MJ09 141 aa16.88■□□□□ 0.29
DDX41-207ENST00000507900 MARC1Q5VT66 337 aa16.88■□□□□ 0.29
DDX41-207ENST00000507900 ARMC3Q5W041 872 aa16.88■□□□□ 0.29
DDX41-207ENST00000507900 CASC4Q6P4E1 433 aa16.88■□□□□ 0.29
DDX41-207ENST00000507900 TRMT10BQ6PF06 316 aaKnown RBP16.88■□□□□ 0.29
DDX41-207ENST00000507900 GAREM2Q75VX8 874 aa16.88■□□□□ 0.29
DDX41-207ENST00000507900 TMEM135Q86UB9 458 aa16.88■□□□□ 0.29
DDX41-207ENST00000507900 ADAMTS19Q8TE59 1207 aa16.88■□□□□ 0.29
DDX41-207ENST00000507900 NSMCE1Q8WV22 266 aa16.88■□□□□ 0.29
DDX41-207ENST00000507900 SLC22A12Q96S37 553 aa16.88■□□□□ 0.29
DDX41-207ENST00000507900 TRIM56Q9BRZ2 755 aaKnown RBP16.88■□□□□ 0.29
DDX41-207ENST00000507900 PDFQ9HBH1 243 aa16.88■□□□□ 0.29
DDX41-207ENST00000507900 ALG13Q9NP73 1137 aaKnown RBP16.88■□□□□ 0.29
DDX41-207ENST00000507900 TLR9Q9NR96 1032 aa16.88■□□□□ 0.29
DDX41-207ENST00000507900 IKBKGQ9Y6K9 419 aa16.88■□□□□ 0.29
DDX41-207ENST00000507900 A0A1B0GVM2 712 aa16.87■□□□□ 0.29
DDX41-207ENST00000507900 MAGEB16A2A368 324 aa16.87■□□□□ 0.29
DDX41-207ENST00000507900 TCAF2A6NFQ2 919 aa16.87■□□□□ 0.29
DDX41-207ENST00000507900 CXorf49A8MYA2 514 aaPredicted RBP16.87■□□□□ 0.29
DDX41-207ENST00000507900 GFRA2O00451 464 aa16.87■□□□□ 0.29
DDX41-207ENST00000507900 POLBP06746 335 aa16.87■□□□□ 0.29
DDX41-207ENST00000507900 SYN1P17600 705 aa16.87■□□□□ 0.29
DDX41-207ENST00000507900 GABRR2P28476 465 aa16.87■□□□□ 0.29
DDX41-207ENST00000507900 CRADDP78560 199 aa16.87■□□□□ 0.29
DDX41-207ENST00000507900 SLC7A9P82251 487 aa16.87■□□□□ 0.29
DDX41-207ENST00000507900 SMAD3P84022 425 aaKnown RBP16.87■□□□□ 0.29
DDX41-207ENST00000507900 GNA12Q03113 381 aa16.87■□□□□ 0.29
DDX41-207ENST00000507900 DMTNQ08495 405 aa16.87■□□□□ 0.29
DDX41-207ENST00000507900 NIPAL4Q0D2K0 466 aa16.87■□□□□ 0.29
DDX41-207ENST00000507900 SLC10A7Q0GE19 358 aa16.87■□□□□ 0.29
DDX41-207ENST00000507900 Q6ZNB5 142 aa16.87■□□□□ 0.29
DDX41-207ENST00000507900 MARK2Q7KZI7 788 aaKnown RBP16.87■□□□□ 0.29
DDX41-207ENST00000507900 SETD3Q86TU7 594 aaPredicted RBP16.87■□□□□ 0.29
DDX41-207ENST00000507900 FAM217AQ8IXS0 508 aa16.87■□□□□ 0.29
DDX41-207ENST00000507900 CFAP52Q8N1V2 620 aa16.87■□□□□ 0.29
DDX41-207ENST00000507900 ELMOD1Q8N336 334 aa16.87■□□□□ 0.29
DDX41-207ENST00000507900 DNAAF3Q8N9W5 541 aa16.87■□□□□ 0.29
DDX41-207ENST00000507900 SPATA22Q8NHS9 363 aa16.87■□□□□ 0.29
DDX41-207ENST00000507900 POF1BQ8WVV4 589 aa16.87■□□□□ 0.29
DDX41-207ENST00000507900 MRPS31Q92665 395 aaKnown RBP16.87■□□□□ 0.29
DDX41-207ENST00000507900 WBP2Q969T9 261 aa16.87■□□□□ 0.29
DDX41-207ENST00000507900 TADA1Q96BN2 335 aa16.87■□□□□ 0.29
DDX41-207ENST00000507900 IMP4Q96G21 291 aaKnown RBP16.87■□□□□ 0.29
DDX41-207ENST00000507900 SMC6Q96SB8 1091 aa16.87■□□□□ 0.29
DDX41-207ENST00000507900 TBL1YQ9BQ87 522 aa16.87■□□□□ 0.29
DDX41-207ENST00000507900 PIH1D1Q9NWS0 290 aaKnown RBP16.87■□□□□ 0.29
DDX41-207ENST00000507900 SAMD15Q9P1V8 674 aa16.87■□□□□ 0.29
DDX41-207ENST00000507900 SMG5Q9UPR3 1016 aaKnown RBP16.87■□□□□ 0.29
DDX41-207ENST00000507900 TBC1D30Q9Y2I9 924 aa16.87■□□□□ 0.29
DDX41-207ENST00000507900 FAM237BA0A1B0GVD1 139 aa16.86■□□□□ 0.29
DDX41-207ENST00000507900 ILVBLA1L0T0 632 aa16.86■□□□□ 0.29
DDX41-207ENST00000507900 HIDE1A8MVS5 230 aa16.86■□□□□ 0.29
DDX41-207ENST00000507900 PIAS1O75925 651 aa16.86■□□□□ 0.29
DDX41-207ENST00000507900 NEBLO76041 1014 aa16.86■□□□□ 0.29
DDX41-207ENST00000507900 USP1O94782 785 aa16.86■□□□□ 0.29
DDX41-207ENST00000507900 MT-CYBP00156 380 aaPredicted RBP16.86■□□□□ 0.29
DDX41-207ENST00000507900 RB1P06400 928 aa16.86■□□□□ 0.29
DDX41-207ENST00000507900 IRF1P10914 325 aa16.86■□□□□ 0.29
DDX41-207ENST00000507900 HDCP19113 662 aa16.86■□□□□ 0.29
DDX41-207ENST00000507900 DNAJB1P25685 340 aa16.86■□□□□ 0.29
DDX41-207ENST00000507900 HOXD9P28356 352 aaPredicted RBP16.86■□□□□ 0.29
DDX41-207ENST00000507900 CDC25CP30307 473 aa16.86■□□□□ 0.29
DDX41-207ENST00000507900 ACVRL1P37023 503 aa16.86■□□□□ 0.29
DDX41-207ENST00000507900 CLCN4P51793 760 aa16.86■□□□□ 0.29
DDX41-207ENST00000507900 RPS24P62847 133 aaKnown RBP16.86■□□□□ 0.29
DDX41-207ENST00000507900 MPP2Q14168 576 aa16.86■□□□□ 0.29
DDX41-207ENST00000507900 TMCO4Q5TGY1 634 aa16.86■□□□□ 0.29
DDX41-207ENST00000507900 TXNDC8Q6A555 127 aa16.86■□□□□ 0.29
DDX41-207ENST00000507900 KDELC1Q6UW63 502 aa16.86■□□□□ 0.29
DDX41-207ENST00000507900 ZNF771Q7L3S4 317 aaPredicted RBP16.86■□□□□ 0.29
DDX41-207ENST00000507900 PPM1NQ8N819 430 aa16.86■□□□□ 0.29
DDX41-207ENST00000507900 ALKBH8Q96BT7 664 aaKnown RBP16.86■□□□□ 0.29
DDX41-207ENST00000507900 MRRFQ96E11 262 aaKnown RBP16.86■□□□□ 0.29
DDX41-207ENST00000507900 TRPC7Q9HCX4 862 aa16.86■□□□□ 0.29
DDX41-207ENST00000507900 VPS45Q9NRW7 570 aa16.86■□□□□ 0.29
DDX41-207ENST00000507900 UBP1Q9NZI7 540 aa16.86■□□□□ 0.29
DDX41-207ENST00000507900 GBF1Q92538 1859 aa16.86■□□□□ 0.29
DDX41-207ENST00000507900 MYLKQ15746 1914 aa16.86■□□□□ 0.29
DDX41-207ENST00000507900 FAM47DPA6NHR8 397 aa16.85■□□□□ 0.29
DDX41-207ENST00000507900 TYROBPO43914 113 aa16.85■□□□□ 0.29
DDX41-207ENST00000507900 EPHA5P54756 1037 aa16.85■□□□□ 0.29
DDX41-207ENST00000507900 PLPP4Q5VZY2 271 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms