RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 SLC36A4Q6YBV0 504 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 BBS12Q6ZW61 710 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 WDR5BQ86VZ2 330 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 FAM72BQ86X60 149 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 CFAP52Q8N1V2 620 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 ATPAF2Q8N5M1 289 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 NAT16Q8N8M0 369 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 OR2T3Q8NH03 318 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 RPLP0P6Q8NHW5 317 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 OR8D1Q8WZ84 308 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 HSPH1Q92598 858 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 RAB7BQ96AH8 199 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 PPP1R16AQ96I34 528 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 LOXL4Q96JB6 756 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 PBKQ96KB5 322 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 SPACA7Q96KW9 195 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 PSKH2Q96QS6 385 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 SRPK1Q96SB4 655 aaKnown RBP8.64□□□□□ -1.03
PDGFC-205ENST00000506880 LRFN3Q9BTN0 628 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 FOXQ1Q9C009 403 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 CIPCQ9C0C6 399 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 C11orf16Q9NQ32 467 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 ZSCAN32Q9NX65 697 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 KCTD5Q9NXV2 234 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 MPP6Q9NZW5 540 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 SEPT3Q9UH03 358 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 VPS51Q9UID3 782 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 INTS6Q9UL03 887 aaKnown RBP8.64□□□□□ -1.03
PDGFC-205ENST00000506880 DNPEPQ9ULA0 475 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 FZD4Q9ULV1 537 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 GUCA1BQ9UMX6 200 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 STON1Q9Y6Q2 735 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 CACNA1EQ15878 2313 aa8.64□□□□□ -1.03
PDGFC-205ENST00000506880 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.63□□□□□ -1.03
PDGFC-205ENST00000506880 MACROD2A1Z1Q3 448 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 PALMO75781 387 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 POP4O95707 220 aaKnown RBP8.63□□□□□ -1.03
PDGFC-205ENST00000506880 KRT1P04264 644 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 KRT10P13645 584 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 C5AR1P21730 350 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 TAS2R40P59535 323 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 AP1S1P61966 158 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 KDSRQ06136 332 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 PPIDQ08752 370 aaKnown RBP8.63□□□□□ -1.03
PDGFC-205ENST00000506880 MTAPQ13126 283 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 TUBB2AQ13885 445 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 RPS6KA1Q15418 735 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 SMTNL2Q2TAL5 461 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 FSCBQ5H9T9 825 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 KCNT1Q5JUK3 1230 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 SEL1L2Q5TEA6 688 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 TMEM215Q68D42 235 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 ZNF776Q68DI1 518 aaPredicted RBP8.63□□□□□ -1.03
PDGFC-205ENST00000506880 NEK5Q6P3R8 708 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 DRICH1Q6PGQ1 229 aaPredicted RBP8.63□□□□□ -1.03
PDGFC-205ENST00000506880 SPOCD1Q6ZMY3 1216 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 RABEPKQ7Z6M1 372 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 TFAP2DQ7Z6R9 452 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 LONP2Q86WA8 852 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 DNAAF5Q86Y56 855 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 TEX26Q8N6G2 289 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 TMEM105Q8N8V8 129 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 ZBTB44Q8NCP5 570 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 TSTD1Q8NFU3 115 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 PCDH19Q8TAB3 1148 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 FAM174AQ8TBP5 190 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 WFDC5Q8TCV5 224 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 FRS2Q8WU20 508 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 MAML1Q92585 1016 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 P3H4Q92791 437 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 EZH1Q92800 747 aaPredicted RBP8.63□□□□□ -1.03
PDGFC-205ENST00000506880 FAM131CQ96AQ9 280 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 LRRC45Q96CN5 670 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 MYO19Q96H55 970 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 BTBD6Q96KE9 485 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 MRGPRX3Q96LB0 322 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 GDAP1L1Q96MZ0 367 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 ZNF641Q96N77 438 aaPredicted RBP8.63□□□□□ -1.03
PDGFC-205ENST00000506880 OLFM3Q96PB7 478 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 PSMB7Q99436 277 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 C19orf43Q9BQ61 176 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 DESI2Q9BSY9 194 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 TUBB2BQ9BVA1 445 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 OSBPL8Q9BZF1 889 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 KLC2Q9H0B6 622 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 RSPH9Q9H1X1 276 aaPredicted RBP8.63□□□□□ -1.03
PDGFC-205ENST00000506880 SP110Q9HB58 689 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 PDFQ9HBH1 243 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 FBRSL1Q9HCM7 1045 aaKnown RBP8.63□□□□□ -1.03
PDGFC-205ENST00000506880 CD248Q9HCU0 757 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 ZDHHC4Q9NPG8 344 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 SPATA6Q9NWH7 488 aaPredicted RBP8.63□□□□□ -1.03
PDGFC-205ENST00000506880 DKK3Q9UBP4 350 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 UBA2Q9UBT2 640 aaPredicted RBP8.63□□□□□ -1.03
PDGFC-205ENST00000506880 FEZ2Q9UHY8 353 aaPredicted RBP8.63□□□□□ -1.03
PDGFC-205ENST00000506880 IPO11Q9UI26 975 aaKnown RBP8.63□□□□□ -1.03
PDGFC-205ENST00000506880 SALL4Q9UJQ4 1053 aa8.63□□□□□ -1.03
PDGFC-205ENST00000506880 PIEZO1Q92508 2521 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 ANKRD36A6QL64 1941 aa8.62□□□□□ -1.03
PDGFC-205ENST00000506880 hCG_1818297A0A087WSY0 165 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms