RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 RAD54BQ9Y620 910 aa13.12□□□□□ -0.31
TCOF1-210ENST00000506767 MYO18AQ92614 2054 aaKnown RBP13.11□□□□□ -0.31
TCOF1-210ENST00000506767 A0A1W2PQF6 199 aa13.11□□□□□ -0.31
TCOF1-210ENST00000506767 J3KR12 359 aa13.11□□□□□ -0.31
TCOF1-210ENST00000506767 DFFAO00273 331 aa13.11□□□□□ -0.31
TCOF1-210ENST00000506767 MAFKO60675 156 aa13.11□□□□□ -0.31
TCOF1-210ENST00000506767 PRAMEF11O60813 436 aa13.11□□□□□ -0.31
TCOF1-210ENST00000506767 PAPSS2O95340 614 aaPredicted RBP13.11□□□□□ -0.31
TCOF1-210ENST00000506767 TGM2P21980 687 aa13.11□□□□□ -0.31
TCOF1-210ENST00000506767 PRKCHP24723 683 aa13.11□□□□□ -0.31
TCOF1-210ENST00000506767 MSNP26038 577 aaKnown RBP13.11□□□□□ -0.31
TCOF1-210ENST00000506767 CETN2P41208 172 aa13.11□□□□□ -0.31
TCOF1-210ENST00000506767 NR2C2P49116 596 aa13.11□□□□□ -0.31
TCOF1-210ENST00000506767 SERPINH1P50454 418 aaKnown RBP13.11□□□□□ -0.31
TCOF1-210ENST00000506767 CLCN6P51797 869 aa13.11□□□□□ -0.31
TCOF1-210ENST00000506767 GEMIN4P57678 1058 aaKnown RBP13.11□□□□□ -0.31
TCOF1-210ENST00000506767 ST8SIA6P61647 398 aa13.11□□□□□ -0.31
TCOF1-210ENST00000506767 IL10RBQ08334 325 aa13.11□□□□□ -0.31
TCOF1-210ENST00000506767 LLGL1Q15334 1064 aa13.11□□□□□ -0.31
TCOF1-210ENST00000506767 FNDC3BQ53EP0 1204 aaKnown RBP13.11□□□□□ -0.31
TCOF1-210ENST00000506767 EOGTQ5NDL2 527 aa13.11□□□□□ -0.31
TCOF1-210ENST00000506767 KAZNQ674X7 775 aa13.11□□□□□ -0.31
TCOF1-210ENST00000506767 NPNTQ6UXI9 565 aa13.11□□□□□ -0.31
TCOF1-210ENST00000506767 TMEM92Q6UXU6 159 aa13.11□□□□□ -0.31
TCOF1-210ENST00000506767 LINGO4Q6UY18 593 aa13.11□□□□□ -0.31
TCOF1-210ENST00000506767 C17orf53Q8N3J3 647 aaPredicted RBP13.11□□□□□ -0.31
TCOF1-210ENST00000506767 OLFM3Q96PB7 478 aa13.11□□□□□ -0.31
TCOF1-210ENST00000506767 HEMGNQ9BXL5 484 aa13.11□□□□□ -0.31
TCOF1-210ENST00000506767 POLR3BQ9NW08 1133 aaPredicted RBP13.11□□□□□ -0.31
TCOF1-210ENST00000506767 IPO11Q9UI26 975 aaKnown RBP13.11□□□□□ -0.31
TCOF1-210ENST00000506767 ZKSCAN5Q9Y2L8 839 aa13.11□□□□□ -0.31
TCOF1-210ENST00000506767 ACTL7AQ9Y615 435 aa13.11□□□□□ -0.31
TCOF1-210ENST00000506767 CKAP5Q14008 2032 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 MUC6Q6W4X9 2439 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 TTC34A8MYJ7 566 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 APOC4-APOC2K7ER74 178 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 K7ERQ8 282 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 KCNK3O14649 394 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 ENC1O14682 589 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 SMAD6O43541 496 aaKnown RBP13.1□□□□□ -0.31
TCOF1-210ENST00000506767 ZNF821O75541 412 aaPredicted RBP13.1□□□□□ -0.31
TCOF1-210ENST00000506767 PEX11BO96011 259 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 APOC2P02655 101 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 C7P10643 843 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 HLA-EP13747 358 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 MX2P20592 715 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 NNMTP40261 264 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 GARSP41250 739 aaKnown RBP13.1□□□□□ -0.31
TCOF1-210ENST00000506767 WASP42768 502 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 DNA2P51530 1060 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 DYNLT1P63172 113 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 KLF1Q13351 362 aaPredicted RBP13.1□□□□□ -0.31
TCOF1-210ENST00000506767 CRY1Q16526 586 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 HNRNPA1L2Q32P51 320 aaKnown RBP13.1□□□□□ -0.31
TCOF1-210ENST00000506767 INO80DQ53TQ3 878 aaPredicted RBP13.1□□□□□ -0.31
TCOF1-210ENST00000506767 SDE2Q6IQ49 451 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 SERPINA13PQ6UXR4 307 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 ZNF354CQ86Y25 554 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 DTWD2Q8NBA8 298 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 CASKIN2Q8WXE0 1202 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 PTPRN2Q92932 1015 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 FATE1Q969F0 183 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 HDAC11Q96DB2 347 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 TRIM44Q96DX7 344 aaPredicted RBP13.1□□□□□ -0.31
TCOF1-210ENST00000506767 TSGA13Q96PP4 275 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 CEP44Q9C0F1 390 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 SUN2Q9UH99 717 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 ARIH1Q9Y4X5 557 aaPredicted RBP13.1□□□□□ -0.31
TCOF1-210ENST00000506767 HEY1Q9Y5J3 304 aa13.1□□□□□ -0.31
TCOF1-210ENST00000506767 EDDM13A0A1B0GTR0 161 aa13.09□□□□□ -0.31
TCOF1-210ENST00000506767 TARSL2A2RTX5 802 aaKnown RBP13.09□□□□□ -0.31
TCOF1-210ENST00000506767 TJP3O95049 919 aa13.09□□□□□ -0.31
TCOF1-210ENST00000506767 MAP3K6O95382 1288 aa13.09□□□□□ -0.31
TCOF1-210ENST00000506767 ATP1A1P05023 1023 aaKnown RBP13.09□□□□□ -0.31
TCOF1-210ENST00000506767 EPHX1P07099 455 aa13.09□□□□□ -0.31
TCOF1-210ENST00000506767 HOXB2P14652 356 aa13.09□□□□□ -0.31
TCOF1-210ENST00000506767 PECAM1P16284 738 aaPredicted RBP13.09□□□□□ -0.31
TCOF1-210ENST00000506767 CCNCP24863 283 aa13.09□□□□□ -0.31
TCOF1-210ENST00000506767 CXCL12P48061 93 aa13.09□□□□□ -0.31
TCOF1-210ENST00000506767 CCR3P51677 355 aa13.09□□□□□ -0.31
TCOF1-210ENST00000506767 NUBP1P53384 320 aa13.09□□□□□ -0.31
TCOF1-210ENST00000506767 GNG11P61952 73 aa13.09□□□□□ -0.31
TCOF1-210ENST00000506767 SATB1Q01826 763 aa13.09□□□□□ -0.31
TCOF1-210ENST00000506767 ZNF33AQ06730 810 aa13.09□□□□□ -0.31
TCOF1-210ENST00000506767 PPIDQ08752 370 aaKnown RBP13.09□□□□□ -0.31
TCOF1-210ENST00000506767 CAMK2GQ13555 558 aaPredicted RBP13.09□□□□□ -0.31
TCOF1-210ENST00000506767 RFTN1Q14699 578 aaPredicted RBP13.09□□□□□ -0.31
TCOF1-210ENST00000506767 CYTH1Q15438 398 aa13.09□□□□□ -0.31
TCOF1-210ENST00000506767 DLG2Q15700 870 aa13.09□□□□□ -0.31
TCOF1-210ENST00000506767 C9orf64Q5T6V5 341 aa13.09□□□□□ -0.31
TCOF1-210ENST00000506767 SEL1L2Q5TEA6 688 aa13.09□□□□□ -0.31
TCOF1-210ENST00000506767 KIAA1211LQ6NV74 962 aa13.09□□□□□ -0.31
TCOF1-210ENST00000506767 LEKR1Q6ZMV7 388 aa13.09□□□□□ -0.31
TCOF1-210ENST00000506767 BZW1Q7L1Q6 419 aaKnown RBP13.09□□□□□ -0.31
TCOF1-210ENST00000506767 METTL3Q86U44 580 aaKnown RBP13.09□□□□□ -0.31
TCOF1-210ENST00000506767 ALYREFQ86V81 257 aaKnown RBP13.09□□□□□ -0.31
TCOF1-210ENST00000506767 MAML2Q8IZL2 1156 aaPredicted RBP13.09□□□□□ -0.31
TCOF1-210ENST00000506767 ATPAF2Q8N5M1 289 aa13.09□□□□□ -0.31
TCOF1-210ENST00000506767 ZNF366Q8N895 744 aa13.09□□□□□ -0.31
TCOF1-210ENST00000506767 ATP11CQ8NB49 1132 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms