RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 RACK1P63244 317 aaKnown RBP9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 SCAPQ12770 1279 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 IQCB1Q15051 598 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 TEAD4Q15561 434 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 CDO1Q16878 200 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 KIF19Q2TAC6 998 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 HLA-BQ31612 363 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 ACCSLQ4AC99 568 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 KCNT1Q5JUK3 1230 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 AGBL4Q5VU57 503 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 FAM46CQ5VWP2 391 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 WDR59Q6PJI9 974 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 DSG4Q86SJ6 1040 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 NLRP14Q86W24 1093 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 NAXDQ8IW45 347 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 OR7D4Q8NG98 312 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 OR2A12Q8NGT7 310 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 BAHD1Q8TBE0 780 aaPredicted RBP9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 PIP4K2CQ8TBX8 421 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 NTAN1Q96AB6 310 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 TTYH3Q9C0H2 523 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 GAREM1Q9H706 876 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 OR12D3Q9UGF7 316 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 ANKRD6Q9Y2G4 727 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 PCDHGB2Q9Y5G2 931 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 TMEM131Q92545 1883 aa9.29□□□□□ -0.92
PDLIM5-209ENST00000506632 IGF2RP11717 2491 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 A0A1B0GTH6 734 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 SPAARA0A1B0GVQ0 90 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 A0A1W2PR77 199 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 FAM47DPA6NHR8 397 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 C1QTNF3-AMACRE9PGA6 284 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 FAM72CH0Y354 149 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 PLK4O00444 970 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 VILLO15195 856 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 PLRG1O43660 514 aaKnown RBP9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 RTN2O75298 545 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 ZNF821O75541 412 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 LRIG2O94898 1065 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 CD160O95971 181 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 TOP3BO95985 862 aaKnown RBP9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 WNT1P04628 370 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 CCDC172P0C7W6 258 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 RHOQP17081 205 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 GPD1P21695 349 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 RRM1P23921 792 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 ZNF143P52747 638 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 TAS2R38P59533 333 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 PPP2CBP62714 309 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 PPP2CAP67775 309 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 SIM1P81133 766 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 ARF5P84085 180 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 GNA12Q03113 381 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 SLC20A2Q08357 652 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 CNTN1Q12860 1018 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 ZNF423Q2M1K9 1284 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 ARL13BQ3SXY8 428 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 FAM72AQ5TYM5 149 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 E4F1Q66K89 784 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 ACAD10Q6JQN1 1059 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 FAM72DQ6L9T8 149 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 C22orf39Q6P5X5 142 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 LRSAM1Q6UWE0 723 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 LAYNQ6UX15 382 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 LINGO4Q6UY18 593 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 GLRX5Q86SX6 157 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 TRIM69Q86WT6 500 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 FAM72BQ86X60 149 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 MCOLN2Q8IZK6 566 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 CCDC185Q8N715 623 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 ATP11CQ8NB49 1132 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 TMIEQ8NEW7 156 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 OR14C36Q8NHC7 312 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 FAM172AQ8WUF8 416 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 SLC6A18Q96N87 628 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 NAP1L5Q96NT1 182 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 CAMK1GQ96NX5 476 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 SELENOOQ9BVL4 669 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 TMEM121BQ9BXQ6 578 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 ACE2Q9BYF1 805 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 MAGEB5Q9BZ81 275 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 TM7SF3Q9NS93 570 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 NDFIP2Q9NV92 336 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 TMEM248Q9NWD8 314 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 TAS2R14Q9NYV8 317 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 ARHGAP20Q9P2F6 1191 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 PCOLCE2Q9UKZ9 415 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 SNX11Q9Y5W9 270 aa9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 TP53BP1Q12888 1972 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-209ENST00000506632 LRRC53A6NM62 1247 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 H0Y8X5 98 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 RNF103O00237 685 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 CBX4O00257 560 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 WNT9AO14904 365 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 FLRT2O43155 660 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 CCP110O43303 1012 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 PCDHGA12O60330 932 aa9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 PLEKP08567 350 aaPredicted RBP9.27□□□□□ -0.93
PDLIM5-209ENST00000506632 CHRNA3P32297 505 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms