RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 CLCN6P51797 869 aa18.63■□□□□ 0.57
PDLIM7-216ENST00000506537 ZNF135P52742 658 aaPredicted RBP18.63■□□□□ 0.57
PDLIM7-216ENST00000506537 YBEYP58557 167 aaPredicted RBP18.63■□□□□ 0.57
PDLIM7-216ENST00000506537 ELAVL3Q14576 367 aaKnown RBP18.63■□□□□ 0.57
PDLIM7-216ENST00000506537 ELF2Q15723 593 aa18.63■□□□□ 0.57
PDLIM7-216ENST00000506537 CST6Q15828 149 aa18.63■□□□□ 0.57
PDLIM7-216ENST00000506537 AFMIDQ63HM1 303 aa18.63■□□□□ 0.57
PDLIM7-216ENST00000506537 RETSATQ6NUM9 610 aa18.63■□□□□ 0.57
PDLIM7-216ENST00000506537 LEKR1Q6ZMV7 388 aa18.63■□□□□ 0.57
PDLIM7-216ENST00000506537 MMAAQ8IVH4 418 aaKnown RBP18.63■□□□□ 0.57
PDLIM7-216ENST00000506537 ARHGAP12Q8IWW6 846 aa18.63■□□□□ 0.57
PDLIM7-216ENST00000506537 TMEFF1Q8IYR6 380 aa18.63■□□□□ 0.57
PDLIM7-216ENST00000506537 NETO2Q8NC67 525 aa18.63■□□□□ 0.57
PDLIM7-216ENST00000506537 FAM71BQ8TC56 605 aa18.63■□□□□ 0.57
PDLIM7-216ENST00000506537 CELF6Q96J87 481 aaKnown RBP18.63■□□□□ 0.57
PDLIM7-216ENST00000506537 CSPG4P5Q96PW8 444 aa18.63■□□□□ 0.57
PDLIM7-216ENST00000506537 BAG1Q99933 345 aaPredicted RBP18.63■□□□□ 0.57
PDLIM7-216ENST00000506537 ETNK2Q9NVF9 386 aa18.63■□□□□ 0.57
PDLIM7-216ENST00000506537 KLHL11Q9NVR0 708 aa18.63■□□□□ 0.57
PDLIM7-216ENST00000506537 LCMT1Q9UIC8 334 aa18.63■□□□□ 0.57
PDLIM7-216ENST00000506537 GMEB2Q9UKD1 530 aa18.63■□□□□ 0.57
PDLIM7-216ENST00000506537 LAMA1P25391 3075 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 H3BRJ5 948 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 MID1O15344 667 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 DAPK3O43293 454 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 KDELR3O43731 214 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 RHOBTB1O94844 696 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 RETP07949 1114 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 ACADMP11310 421 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 CD6P30203 668 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 ARHGAP25P42331 645 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 PTGER3P43115 390 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 PSMD8P48556 350 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 METAP1P53582 386 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 CDH6P55285 790 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 RPL6Q02878 288 aaKnown RBP18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 ZBTB16Q05516 673 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 SERINC3Q13530 473 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 SPA17Q15506 151 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 HADHQ16836 314 aaKnown RBP18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 PARP15Q460N3 678 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 TP53INP2Q8IXH6 220 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 DEFB119Q8N690 84 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 ACRBPQ8NEB7 543 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 OR2A12Q8NGT7 310 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 TOE1Q96GM8 510 aaKnown RBP18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 LOXL4Q96JB6 756 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 TNKS2Q9H2K2 1166 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 PABPC3Q9H361 631 aaKnown RBP18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 PARD6AQ9NPB6 346 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 WSB2Q9NYS7 404 aaPredicted RBP18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 SERGEFQ9UGK8 458 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 SARDHQ9UL12 918 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 FCF1Q9Y324 198 aaKnown RBP18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 CEP192Q8TEP8 1941 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 NUMA1Q14980 2115 aa18.62■□□□□ 0.57
PDLIM7-216ENST00000506537 DMXL1Q9Y485 3027 aa18.61■□□□□ 0.57
PDLIM7-216ENST00000506537 NUP205Q92621 2012 aa18.61■□□□□ 0.57
PDLIM7-216ENST00000506537 CXorf51AA0A1B0GTR3 108 aa18.61■□□□□ 0.57
PDLIM7-216ENST00000506537 MAP3K13O43283 966 aa18.61■□□□□ 0.57
PDLIM7-216ENST00000506537 BNIP3LO60238 219 aa18.61■□□□□ 0.57
PDLIM7-216ENST00000506537 DNTTP04053 509 aa18.61■□□□□ 0.57
PDLIM7-216ENST00000506537 TGM1P22735 817 aa18.61■□□□□ 0.57
PDLIM7-216ENST00000506537 AMPD1P23109 780 aa18.61■□□□□ 0.57
PDLIM7-216ENST00000506537 IL4RP24394 825 aa18.61■□□□□ 0.57
PDLIM7-216ENST00000506537 ARL4AP40617 200 aa18.61■□□□□ 0.57
PDLIM7-216ENST00000506537 NDST2P52849 883 aa18.61■□□□□ 0.57
PDLIM7-216ENST00000506537 HADHBP55084 474 aaKnown RBP18.61■□□□□ 0.57
PDLIM7-216ENST00000506537 SLC20A2Q08357 652 aa18.61■□□□□ 0.57
PDLIM7-216ENST00000506537 MMRN1Q13201 1228 aa18.61■□□□□ 0.57
PDLIM7-216ENST00000506537 SLC36A4Q6YBV0 504 aa18.61■□□□□ 0.57
PDLIM7-216ENST00000506537 ARMCX6Q7L4S7 300 aa18.61■□□□□ 0.57
PDLIM7-216ENST00000506537 LPCAT2Q7L5N7 544 aa18.61■□□□□ 0.57
PDLIM7-216ENST00000506537 FAM124AQ86V42 546 aa18.61■□□□□ 0.57
PDLIM7-216ENST00000506537 SLC41A1Q8IVJ1 513 aa18.61■□□□□ 0.57
PDLIM7-216ENST00000506537 AADATQ8N5Z0 425 aa18.61■□□□□ 0.57
PDLIM7-216ENST00000506537 CHST14Q8NCH0 376 aa18.61■□□□□ 0.57
PDLIM7-216ENST00000506537 HINFPQ9BQA5 517 aa18.61■□□□□ 0.57
PDLIM7-216ENST00000506537 CEP44Q9C0F1 390 aa18.61■□□□□ 0.57
PDLIM7-216ENST00000506537 SLC39A8Q9C0K1 460 aa18.61■□□□□ 0.57
PDLIM7-216ENST00000506537 PDFQ9HBH1 243 aa18.61■□□□□ 0.57
PDLIM7-216ENST00000506537 SALL4Q9UJQ4 1053 aa18.61■□□□□ 0.57
PDLIM7-216ENST00000506537 RNF103O00237 685 aa18.6■□□□□ 0.57
PDLIM7-216ENST00000506537 MCF2LO15068 1137 aa18.6■□□□□ 0.57
PDLIM7-216ENST00000506537 RNASEH1O60930 286 aaKnown RBP18.6■□□□□ 0.57
PDLIM7-216ENST00000506537 CTSLP07711 333 aa18.6■□□□□ 0.57
PDLIM7-216ENST00000506537 DHPSP49366 369 aaPredicted RBP18.6■□□□□ 0.57
PDLIM7-216ENST00000506537 DPYSL3Q14195 570 aa18.6■□□□□ 0.57
PDLIM7-216ENST00000506537 KRT81Q14533 505 aa18.6■□□□□ 0.57
PDLIM7-216ENST00000506537 TTC31Q49AM3 519 aaPredicted RBP18.6■□□□□ 0.57
PDLIM7-216ENST00000506537 ZNF354CQ86Y25 554 aa18.6■□□□□ 0.57
PDLIM7-216ENST00000506537 OR8D1Q8WZ84 308 aa18.6■□□□□ 0.57
PDLIM7-216ENST00000506537 GPR174Q9BXC1 333 aa18.6■□□□□ 0.57
PDLIM7-216ENST00000506537 ARRDC1-AS1Q9H2J1 176 aa18.6■□□□□ 0.57
PDLIM7-216ENST00000506537 GOLPH3Q9H4A6 298 aa18.6■□□□□ 0.57
PDLIM7-216ENST00000506537 DONSONQ9NYP3 566 aa18.6■□□□□ 0.57
PDLIM7-216ENST00000506537 HPCAL4Q9UM19 191 aa18.6■□□□□ 0.57
PDLIM7-216ENST00000506537 HYOU1Q9Y4L1 999 aa18.6■□□□□ 0.57
PDLIM7-216ENST00000506537 A0A0A6YYK5 440 aaPredicted RBP18.59■□□□□ 0.57
PDLIM7-216ENST00000506537 A0A1W2PP55 124 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms