RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 FAM72DQ6L9T8 149 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 KIAA1324Q6UXG2 1013 aaKnown RBP7.44□□□□□ -1.22
GYPB-206ENST00000506516 SLC36A4Q6YBV0 504 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 NLRP14Q86W24 1093 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 FAM72BQ86X60 149 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 ZNF354CQ86Y25 554 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 PYROXD2Q8N2H3 581 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 ARFGAP1Q8N6T3 406 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 NIPA2Q8N8Q9 360 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 RTL3Q8N8U3 475 aaKnown RBP7.44□□□□□ -1.22
GYPB-206ENST00000506516 ATP11CQ8NB49 1132 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 OR2T3Q8NH03 318 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 SNIP1Q8TAD8 396 aaKnown RBP7.44□□□□□ -1.22
GYPB-206ENST00000506516 SLC35G2Q8TBE7 412 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 ERLEC1Q96DZ1 483 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 ALG14Q96F25 216 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 BTBD6Q96KE9 485 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 MRGPRX3Q96LB0 322 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 MRGPRX1Q96LB2 322 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 MAGEB5Q9BZ81 275 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 MAGEH1Q9H213 219 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 ITM2CQ9NQX7 267 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 TMEM248Q9NWD8 314 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 DNAI1Q9UI46 699 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 SLCO3A1Q9UIG8 710 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 SCML1Q9UN30 329 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 OR51B4Q9Y5P0 310 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 EPN1Q9Y6I3 576 aaPredicted RBP7.44□□□□□ -1.22
GYPB-206ENST00000506516 WASF2Q9Y6W5 498 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 DMDP11532 3685 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 F5P12259 2224 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 MYO15AQ9UKN7 3530 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 A0A0D9SEW6 157 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 EDDM13A0A1B0GTR0 161 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 TTC24A2A3L6 582 aaPredicted RBP7.43□□□□□ -1.22
GYPB-206ENST00000506516 PRR23AA6NEV1 266 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 WASH4PA8MWX3 477 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 TTC34A8MYJ7 566 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 H3BRJ5 948 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 CBX4O00257 560 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 KDELR3O43731 214 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 GDF9O60383 454 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 NDUFS2O75306 463 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 PROSCO94903 275 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 LCA5LO95447 670 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 DNTTP04053 509 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 ARL4AP40617 200 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 P2RY2P41231 377 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 NOP2P46087 812 aaKnown RBP7.43□□□□□ -1.22
GYPB-206ENST00000506516 MRE11P49959 708 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 NDST2P52849 883 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 COPAP53621 1224 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 GEMIN4P57678 1058 aaKnown RBP7.43□□□□□ -1.22
GYPB-206ENST00000506516 GSDMDP57764 484 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 ZBTB16Q05516 673 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 SEMA3BQ13214 749 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 SRSF5Q13243 272 aaKnown RBP7.43□□□□□ -1.22
GYPB-206ENST00000506516 ELOAQ14241 798 aaKnown RBP7.43□□□□□ -1.22
GYPB-206ENST00000506516 KRT81Q14533 505 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 MESDQ14696 234 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 DLG2Q15700 870 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 ODF2Q5BJF6 829 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 PPP6R3Q5H9R7 873 aaPredicted RBP7.43□□□□□ -1.22
GYPB-206ENST00000506516 KCNT1Q5JUK3 1230 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 SPDYCQ5MJ68 293 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 C9orf64Q5T6V5 341 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 LAIR1Q6GTX8 287 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 LPCAT2Q7L5N7 544 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 DSG4Q86SJ6 1040 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 ALYREFQ86V81 257 aaKnown RBP7.43□□□□□ -1.22
GYPB-206ENST00000506516 MAP7D3Q8IWC1 876 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 CYP4X1Q8N118 509 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 TXLNBQ8N3L3 684 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 SH2D3CQ8N5H7 860 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 LZTR1Q8N653 840 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 ZNF366Q8N895 744 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 DCAF4L2Q8NA75 395 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 SUMF1Q8NBK3 374 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 SPC24Q8NBT2 197 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 OR7D4Q8NG98 312 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 OR52K2Q8NGK3 314 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 TEKT4Q8WW24 435 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 RFFLQ8WZ73 363 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 HSPH1Q92598 858 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 RUBCNQ92622 972 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 ARHGEF2Q92974 986 aaKnown RBP7.43□□□□□ -1.22
GYPB-206ENST00000506516 MYO19Q96H55 970 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 LOXL4Q96JB6 756 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 ZC3H10Q96K80 434 aaKnown RBP7.43□□□□□ -1.22
GYPB-206ENST00000506516 CCDC114Q96M63 670 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 BAG1Q99933 345 aaPredicted RBP7.43□□□□□ -1.22
GYPB-206ENST00000506516 HINFPQ9BQA5 517 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 SNRNP25Q9BV90 132 aaKnown RBP7.43□□□□□ -1.22
GYPB-206ENST00000506516 PACSIN1Q9BY11 444 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 ACE2Q9BYF1 805 aaPredicted RBP7.43□□□□□ -1.22
GYPB-206ENST00000506516 MKRN2Q9H000 416 aaKnown RBP7.43□□□□□ -1.22
GYPB-206ENST00000506516 CD248Q9HCU0 757 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 PRSS16Q9NQE7 514 aa7.43□□□□□ -1.22
GYPB-206ENST00000506516 DNAAF2Q9NVR5 837 aaKnown RBP7.43□□□□□ -1.22
GYPB-206ENST00000506516 GPATCH2LQ9NWQ4 482 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms