RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 PPP1R2P3Q6NXS1 205 aa10.67□□□□□ -0.7
NR1I3-222ENST00000506018 Q6ZVU0 165 aa10.67□□□□□ -0.7
NR1I3-222ENST00000506018 STRADAQ7RTN6 431 aa10.67□□□□□ -0.7
NR1I3-222ENST00000506018 TFAP2DQ7Z6R9 452 aa10.67□□□□□ -0.7
NR1I3-222ENST00000506018 FAM131BQ86XD5 332 aa10.67□□□□□ -0.7
NR1I3-222ENST00000506018 OXR1Q8N573 874 aa10.67□□□□□ -0.7
NR1I3-222ENST00000506018 AADATQ8N5Z0 425 aa10.67□□□□□ -0.7
NR1I3-222ENST00000506018 PIP4K2CQ8TBX8 421 aa10.67□□□□□ -0.7
NR1I3-222ENST00000506018 FRS2Q8WU20 508 aa10.67□□□□□ -0.7
NR1I3-222ENST00000506018 ALG14Q96F25 216 aa10.67□□□□□ -0.7
NR1I3-222ENST00000506018 SERAC1Q96JX3 654 aa10.67□□□□□ -0.7
NR1I3-222ENST00000506018 CAMK1GQ96NX5 476 aa10.67□□□□□ -0.7
NR1I3-222ENST00000506018 C11orf70Q9BRQ4 267 aa10.67□□□□□ -0.7
NR1I3-222ENST00000506018 GDF3Q9NR23 364 aa10.67□□□□□ -0.7
NR1I3-222ENST00000506018 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.67□□□□□ -0.7
NR1I3-222ENST00000506018 ADAM22Q9P0K1 906 aa10.67□□□□□ -0.7
NR1I3-222ENST00000506018 PPARGC1AQ9UBK2 798 aaKnown RBP10.67□□□□□ -0.7
NR1I3-222ENST00000506018 SERGEFQ9UGK8 458 aa10.67□□□□□ -0.7
NR1I3-222ENST00000506018 PCOLCE2Q9UKZ9 415 aa10.67□□□□□ -0.7
NR1I3-222ENST00000506018 HPCAL4Q9UM19 191 aa10.67□□□□□ -0.7
NR1I3-222ENST00000506018 MSRB2Q9Y3D2 182 aa10.67□□□□□ -0.7
NR1I3-222ENST00000506018 OR51B4Q9Y5P0 310 aa10.67□□□□□ -0.7
NR1I3-222ENST00000506018 DOCK9Q9BZ29 2069 aa10.67□□□□□ -0.7
NR1I3-222ENST00000506018 CEP295Q9C0D2 2601 aa10.67□□□□□ -0.7
NR1I3-222ENST00000506018 CBX4O00257 560 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 PLRG1O43660 514 aaKnown RBP10.66□□□□□ -0.7
NR1I3-222ENST00000506018 PCDHGA12O60330 932 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 ENDOD1O94919 500 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 FTH1P19P0C7X4 201 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 SRCP12931 536 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 VAV1P15498 845 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 FERP16591 822 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 TFE3P19532 575 aaPredicted RBP10.66□□□□□ -0.7
NR1I3-222ENST00000506018 SPINK2P20155 84 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 CTSKP43235 329 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 ARRB1P49407 418 aaPredicted RBP10.66□□□□□ -0.7
NR1I3-222ENST00000506018 KLK7P49862 253 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 IRAK1P51617 712 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 GEMIN4P57678 1058 aaKnown RBP10.66□□□□□ -0.7
NR1I3-222ENST00000506018 NAPEPLDQ6IQ20 393 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 SARM1Q6SZW1 724 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 GLRX5Q86SX6 157 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 SLC20A1Q8WUM9 679 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 RXFP2Q8WXD0 754 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 SLC6A18Q96N87 628 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 ERGIC2Q96RQ1 377 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 SPON2Q9BUD6 331 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 TRIM5Q9C035 493 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 CEP44Q9C0F1 390 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 IL21RQ9HBE5 538 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 PREBQ9HCU5 417 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 ATP13A1Q9HD20 1204 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 SCUBE2Q9NQ36 999 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 MPP6Q9NZW5 540 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 VPS51Q9UID3 782 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 PPM1HQ9ULR3 514 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 DMTF1Q9Y222 760 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 SIK3Q9Y2K2 1263 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 CHD5Q8TDI0 1954 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 TRPM6Q9BX84 2022 aa10.66□□□□□ -0.7
NR1I3-222ENST00000506018 CXorf51AA0A1B0GTR3 108 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 FAM170AA1A519 330 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 LRRC10BA6NIK2 292 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 C1QTNF9BB2RNN3 333 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 KPNA3O00505 521 aaPredicted RBP10.65□□□□□ -0.7
NR1I3-222ENST00000506018 RNGTTO60942 597 aaKnown RBP10.65□□□□□ -0.7
NR1I3-222ENST00000506018 C1QTNF9P0C862 333 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 UNGP13051 313 aaPredicted RBP10.65□□□□□ -0.7
NR1I3-222ENST00000506018 CHRNA3P32297 505 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 DRD3P35462 400 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 PTPN9P43378 593 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 MAPKAPK2P49137 400 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 GSCP56915 257 aaPredicted RBP10.65□□□□□ -0.7
NR1I3-222ENST00000506018 UBASH3AP57075 661 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 FAM193AP78312 1265 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 FANCCQ00597 558 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 BNC1Q01954 994 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 NRG1Q02297 640 aaPredicted RBP10.65□□□□□ -0.7
NR1I3-222ENST00000506018 GNA12Q03113 381 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 CNTN1Q12860 1018 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 OVGP1Q12889 678 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 STAT4Q14765 748 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 RWDD4Q6NW29 188 aaKnown RBP10.65□□□□□ -0.7
NR1I3-222ENST00000506018 NEK5Q6P3R8 708 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 C22orf39Q6P5X5 142 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 DBX2Q6ZNG2 339 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 BNIPLQ7Z465 357 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 IQCHQ86VS3 1027 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 TRIM69Q86WT6 500 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 PHF13Q86YI8 300 aaPredicted RBP10.65□□□□□ -0.7
NR1I3-222ENST00000506018 ZNF683Q8IZ20 524 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 CHCHD4Q8N4Q1 142 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 EMC1Q8N766 993 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 C3orf20Q8ND61 904 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 TMIEQ8NEW7 156 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 OR52K2Q8NGK3 314 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 SLC30A5Q8TAD4 765 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 ADAMTS14Q8WXS8 1223 aa10.65□□□□□ -0.7
NR1I3-222ENST00000506018 ELF4Q99607 663 aaPredicted RBP10.65□□□□□ -0.7
NR1I3-222ENST00000506018 ANLNQ9NQW6 1124 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms