RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 FNDC7Q5VTL7 733 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 TTI2Q6NXR4 508 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 AADACL2Q6P093 401 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 GSTA5Q7RTV2 222 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 SLC46A3Q7Z3Q1 461 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 TICAM1Q8IUC6 712 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 GALNT13Q8IUC8 556 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 BRSK2Q8IWQ3 736 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 LAS2Q8IYD9 372 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 POMGNT2Q8NAT1 580 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 KCTD6Q8NC69 237 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 TMEM116Q8NCL8 245 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 MYCBPAPQ8TBZ2 947 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 PERPQ96FX8 193 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 NCAPGQ9BPX3 1015 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 LBHD1Q9BQE6 289 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 PDE7BQ9NP56 450 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 SUCLA2Q9P2R7 463 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 PEMTQ9UBM1 199 aa4.13□□□□□ -1.75
TRAPPC13-208ENST00000505553 C17orf113A0A1B0GUU1 675 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 FRMD3A2A2Y4 597 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 STRNO43815 780 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 CEP104O60308 925 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 TJP3O95049 919 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 NDUFA10O95299 355 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 PEX11BO96011 259 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 RHOP08100 348 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 SCG2P13521 617 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 FMO4P31512 558 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 TTKP33981 857 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 PBX3P40426 434 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 DIO1P49895 249 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 AGTR2P50052 363 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 CDH8P55286 799 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 GPC5P78333 572 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 PLIN5Q00G26 463 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 IL13RA2Q14627 380 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 RRP1BQ14684 758 aaKnown RBP4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 PTPRRQ15256 657 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 SF3B3Q15393 1217 aaKnown RBP4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 NTRK2Q16620 822 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 AP5B1Q2VPB7 878 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 GLE1Q53GS7 698 aaKnown RBP4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 TCP11X2Q5H9J9 407 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 UBAP2Q5T6F2 1119 aaKnown RBP4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 GARNL3Q5VVW2 1013 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 ATG9BQ674R7 924 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 HMBOX1Q6NT76 420 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 MTFR2Q6P444 385 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 VWA1Q6PCB0 445 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 KYAT3Q6YP21 454 aaKnown RBP4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 Q6ZWC4 215 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 CHST9Q7L1S5 443 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 ZNF627Q7L945 461 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 GALNTL5Q7Z4T8 443 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 WDR53Q7Z5U6 358 aaPredicted RBP4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 ADGRA1Q86SQ6 560 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 TADA2BQ86TJ2 420 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 SFTPA1Q8IWL2 248 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 ARHGAP12Q8IWW6 846 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 VPS52Q8N1B4 723 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 CPXM2Q8N436 756 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 LNX2Q8N448 690 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 PLD5Q8N7P1 536 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 CPEB3Q8NE35 698 aaKnown RBP4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 ABHD11Q8NFV4 315 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 CADM4Q8NFZ8 388 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 HSPH1Q92598 858 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 AKAP1Q92667 903 aaKnown RBP eCLIP4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 ZNF653Q96CK0 615 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 PGAM5Q96HS1 289 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 SNX18Q96RF0 628 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 HDHD5Q9BXW7 423 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 EDEM3Q9BZQ6 932 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 ERVMER34-1Q9H9K5 563 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 ARHGEF3Q9NR81 526 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 GIMAP4Q9NUV9 329 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 CEP72Q9P209 647 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 MTMR6Q9Y217 621 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 FAM169AQ9Y6X4 670 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 ADGRA2Q96PE1 1338 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 BICDL2A1A5D9 508 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 TMEM247A6NEH6 219 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 LRRC53A6NM62 1247 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 UBE2CO00762 179 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 DSCR3O14972 297 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 PRAMEF2O60811 474 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 KAT7O95251 611 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 GALTP07902 379 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 ALDOCP09972 364 aaKnown RBP4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 IRF1P10914 325 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 ZFXP17010 805 aaPredicted RBP4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 TBXAS1P24557 533 aaPredicted RBP4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 MCM3P25205 808 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 CTGFP29279 349 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 OAS2P29728 719 aaKnown RBP4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 MRPL12P52815 198 aaKnown RBP4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 SLC37A1P57057 533 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 CFHR3Q02985 330 aa4.12□□□□□ -1.75
TRAPPC13-208ENST00000505553 NIPAL4Q0D2K0 466 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms