RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 C15orf39Q6ZRI6 1047 aa14.32□□□□□ -0.12
TCOF1-207ENST00000504761 BTN2A3PQ96KV6 586 aa14.32□□□□□ -0.12
TCOF1-207ENST00000504761 PCDHB9Q9Y5E1 797 aa14.32□□□□□ -0.12
TCOF1-207ENST00000504761 FAM95CA0A1B0GW59 222 aa14.32□□□□□ -0.12
TCOF1-207ENST00000504761 CHUKO15111 745 aa14.32□□□□□ -0.12
TCOF1-207ENST00000504761 CORO1AP31146 461 aaKnown RBP14.32□□□□□ -0.12
TCOF1-207ENST00000504761 PPM1AP35813 382 aa14.32□□□□□ -0.12
TCOF1-207ENST00000504761 GPR15P49685 360 aa14.32□□□□□ -0.12
TCOF1-207ENST00000504761 SERINC5Q86VE9 423 aa14.32□□□□□ -0.12
TCOF1-207ENST00000504761 TNS4Q8IZW8 715 aa14.32□□□□□ -0.12
TCOF1-207ENST00000504761 UCMAQ8WVF2 138 aa14.32□□□□□ -0.12
TCOF1-207ENST00000504761 NCKIPSDQ9NZQ3 722 aa14.32□□□□□ -0.12
TCOF1-207ENST00000504761 KNL1Q8NG31 2342 aa14.32□□□□□ -0.12
TCOF1-207ENST00000504761 TRAV19A0A0A6YYK7 116 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 AGPSO00116 658 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 CCL22O00626 93 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 SOCS7O14512 581 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 KLHL2O95198 593 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 RNASEH2BQ5TBB1 312 aaKnown RBP14.31□□□□□ -0.12
TCOF1-207ENST00000504761 GBP5Q96PP8 586 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 Q9H521 79 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 CHRAC1Q9NRG0 131 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 STOML1Q9UBI4 398 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 ZMYND8Q9ULU4 1186 aaPredicted RBP14.31□□□□□ -0.12
TCOF1-207ENST00000504761 CHKBQ9Y259 395 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 CTPS1P17812 591 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 L1CAMP32004 1257 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 APLP1P51693 650 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 NAGLUP54802 743 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 TTLL9Q3SXZ7 439 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 SPDYCQ5MJ68 293 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 OLFML1Q6UWY5 402 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 ZNF567Q8N184 647 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 TDRD5Q8NAT2 981 aaKnown RBP14.31□□□□□ -0.12
TCOF1-207ENST00000504761 CMASQ8NFW8 434 aaPredicted RBP14.31□□□□□ -0.12
TCOF1-207ENST00000504761 EMID1Q96A84 441 aaPredicted RBP14.31□□□□□ -0.12
TCOF1-207ENST00000504761 OMDQ99983 421 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 ZDHHC6Q9H6R6 413 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 CAB39LQ9H9S4 337 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 NMRAL1Q9HBL8 299 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 CRTAC1Q9NQ79 661 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 MIOSQ9NXC5 875 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 DNAJB4Q9UDY4 337 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 TRIM13O60858 407 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 CCL5P13501 91 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 CREB1P16220 341 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 ZNF284Q2VY69 593 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 SLC41A1Q8IVJ1 513 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 WDTC1Q8N5D0 677 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 SMG8Q8ND04 991 aaKnown RBP14.31□□□□□ -0.12
TCOF1-207ENST00000504761 OR7D4Q8NG98 312 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 FAXDC2Q96IV6 333 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 MRPL1Q9BYD6 325 aaKnown RBP14.31□□□□□ -0.12
TCOF1-207ENST00000504761 GLOD4Q9HC38 313 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 SYN3O14994 580 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 PRPF4O43172 522 aaKnown RBP eCLIP14.31□□□□□ -0.12
TCOF1-207ENST00000504761 GLUD1P00367 558 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 SEL1L3Q68CR1 1132 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 RNF217Q8TC41 542 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 HDAC10Q969S8 669 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 CMTM5Q96DZ9 223 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 MFSD3Q96ES6 412 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 PAWRQ96IZ0 340 aaKnown RBP14.31□□□□□ -0.12
TCOF1-207ENST00000504761 SMOQ99835 787 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 AURKCQ9UQB9 309 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 PCDHA11Q9Y5I1 949 aa14.31□□□□□ -0.12
TCOF1-207ENST00000504761 CCL16O15467 120 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 DDHD2O94830 711 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 C1RP00736 705 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 FGBP02675 491 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 TFE3P19532 575 aaPredicted RBP14.3□□□□□ -0.12
TCOF1-207ENST00000504761 TYMPP19971 482 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 SCTRP47872 440 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 SLC1A6P48664 564 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 INCA1Q0VD86 236 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 RASA2Q15283 850 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 SDE2Q6IQ49 451 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 MECRQ9BV79 373 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 BBS2Q9BXC9 721 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 SYTL2Q9HCH5 934 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 CFAP97Q9P2B7 532 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 DPP7Q9UHL4 492 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 CYTH4Q9UIA0 394 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 A0A1B0GUL6 1792 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 NRAPQ86VF7 1730 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 PIRO00625 290 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 TMEM63AO94886 807 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 IGSF6O95976 241 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 CHRNA1P02708 482 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 RBP1P09455 135 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 PITX1P78337 314 aaPredicted RBP14.3□□□□□ -0.12
TCOF1-207ENST00000504761 BOP1Q14137 746 aaKnown RBP14.3□□□□□ -0.12
TCOF1-207ENST00000504761 GALNTL6Q49A17 601 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 MORN1Q5T089 497 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 ZDHHC24Q6UX98 284 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 OTOAQ7RTW8 1153 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 ARL14EPQ8N8R7 260 aaPredicted RBP14.3□□□□□ -0.12
TCOF1-207ENST00000504761 C12orf50Q8NA57 414 aaPredicted RBP14.3□□□□□ -0.12
TCOF1-207ENST00000504761 APBB2Q92870 758 aa14.3□□□□□ -0.12
TCOF1-207ENST00000504761 TMEM209Q96SK2 561 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms