RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 CEP104O60308 925 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 PRAMEF11O60813 436 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 ASLP04424 464 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 SRCP12931 536 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 NTSR1P30989 418 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 SERPINB6P35237 376 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 ETFBP38117 255 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 CETN2P41208 172 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 CLCN5P51795 746 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 GALNT2Q10471 571 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 MTAPQ13126 283 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 TFDP2Q14188 446 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 ACCSLQ4AC99 568 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 SEL1L2Q5TEA6 688 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 CCDC181Q5TID7 509 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 KIAA1211LQ6NV74 962 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 SERPINA13PQ6UXR4 307 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 TMEM92Q6UXU6 159 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 BBS12Q6ZW61 710 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 BMP8AQ7Z5Y6 402 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 FBXL6Q8N531 539 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 ATP11CQ8NB49 1132 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 CHRDQ9H2X0 955 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 C10orf88Q9H8K7 445 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 DONSONQ9NYP3 566 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 SMARCAL1Q9NZC9 954 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 HPCAL4Q9UM19 191 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 SHROOM3Q8TF72 1996 aa13.54□□□□□ -0.24
PDLIM7-212ENST00000504380 ZNF185O15231 689 aa13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 BNIP3LO60238 219 aa13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 MAFKO60675 156 aa13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 EPHX1P07099 455 aa13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 SRPRAP08240 638 aaKnown RBP13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 ZFXP17010 805 aaPredicted RBP13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 PTPN7P35236 360 aa13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 DEKP35659 375 aaKnown RBP13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 RPS9P46781 194 aaKnown RBP13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 ST8SIA6P61647 398 aa13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 SATB1Q01826 763 aa13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 SULT2A1Q06520 285 aa13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 CYTH1Q15438 398 aa13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 DLG2Q15700 870 aa13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 SYNPOQ8N3V7 929 aa13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 SH2D3CQ8N5H7 860 aa13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 ATPAF2Q8N5M1 289 aa13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 CCNYQ8ND76 341 aa13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 COG1Q8WTW3 980 aa13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 ACDQ96AP0 544 aa13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 MS4A14Q96JA4 679 aa13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 PHOX2BQ99453 314 aa13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 LGMNQ99538 433 aa13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 TNKS2Q9H2K2 1166 aa13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 TMEM245Q9H330 911 aa13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 SP110Q9HB58 689 aa13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 PDFQ9HBH1 243 aa13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 SPATA6Q9NWH7 488 aaPredicted RBP13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 MMP17Q9ULZ9 603 aa13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 R3HDM2Q9Y2K5 976 aaKnown RBP13.53□□□□□ -0.24
PDLIM7-212ENST00000504380 CHURC1-FNTBB4DL54 471 aa13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 TJP3O95049 919 aa13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 HOXB2P14652 356 aa13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 TGM2P21980 687 aa13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 MSNP26038 577 aaKnown RBP13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 AVPR2P30518 371 aa13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 GARSP41250 739 aaKnown RBP13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 SERPINH1P50454 418 aaKnown RBP13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 OTUD4Q01804 1114 aaKnown RBP13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 IL10RBQ08334 325 aa13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 EOGTQ5NDL2 527 aa13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 SDE2Q6IQ49 451 aa13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 RETSATQ6NUM9 610 aa13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 SYT10Q6XYQ8 523 aa13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 Q6ZVU0 165 aa13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 ZC3H18Q86VM9 953 aaKnown RBP13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 SLC13A5Q86YT5 568 aaPredicted RBP13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 ACTL9Q8TC94 416 aa13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 FRS2Q8WU20 508 aa13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 P3H4Q92791 437 aa13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 C16orf45Q96MC5 204 aaPredicted RBP13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 HHIPQ96QV1 700 aa13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 OSBPL9Q96SU4 736 aa13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 NAPGQ99747 312 aaPredicted RBP13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 TM6SF2Q9BZW4 377 aa13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 SLC6A17Q9H1V8 727 aa13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 CARD9Q9H257 536 aa13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 UBA2Q9UBT2 640 aaPredicted RBP13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 HS3ST2Q9Y278 367 aa13.52□□□□□ -0.25
PDLIM7-212ENST00000504380 ZNF318Q5VUA4 2279 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 A0A1W2PQF6 199 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 TTC24A2A3L6 582 aaPredicted RBP13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 ATP9BO43861 1147 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 SIN3BO75182 1162 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 ZNF821O75541 412 aaPredicted RBP13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 TMCC1O94876 653 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 PEX11BO96011 259 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 NNMTP40261 264 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 PXNP49023 591 aaPredicted RBP13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 SLC10A7Q0GE19 358 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 AP1B1Q10567 949 aa13.51□□□□□ -0.25
PDLIM7-212ENST00000504380 KLF1Q13351 362 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms