RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 HOXB2P14652 356 aa4.44□□□□□ -1.7
SUB1-204ENST00000504016 TNFRSF8P28908 595 aa4.44□□□□□ -1.7
SUB1-204ENST00000504016 CYP2J2P51589 502 aa4.44□□□□□ -1.7
SUB1-204ENST00000504016 ARL4CP56559 192 aa4.44□□□□□ -1.7
SUB1-204ENST00000504016 RHAGQ02094 409 aa4.44□□□□□ -1.7
SUB1-204ENST00000504016 SLC12A1Q13621 1099 aa4.44□□□□□ -1.7
SUB1-204ENST00000504016 ODF3L2Q3SX64 289 aa4.44□□□□□ -1.7
SUB1-204ENST00000504016 GXYLT1Q4G148 440 aa4.44□□□□□ -1.7
SUB1-204ENST00000504016 PIK3CD-AS1Q5SR53 167 aa4.44□□□□□ -1.7
SUB1-204ENST00000504016 PDXDC1Q6P996 788 aa4.44□□□□□ -1.7
SUB1-204ENST00000504016 GPSM1Q86YR5 675 aa4.44□□□□□ -1.7
SUB1-204ENST00000504016 BRSK2Q8IWQ3 736 aa4.44□□□□□ -1.7
SUB1-204ENST00000504016 TMEM174Q8WUU8 243 aa4.44□□□□□ -1.7
SUB1-204ENST00000504016 ZSCAN31Q96LW9 406 aaPredicted RBP4.44□□□□□ -1.7
SUB1-204ENST00000504016 RBM38Q9H0Z9 239 aaKnown RBP4.44□□□□□ -1.7
SUB1-204ENST00000504016 Q9N2J8 555 aa4.44□□□□□ -1.7
SUB1-204ENST00000504016 TMEM248Q9NWD8 314 aa4.44□□□□□ -1.7
SUB1-204ENST00000504016 PLEKHB1Q9UF11 243 aaPredicted RBP4.44□□□□□ -1.7
SUB1-204ENST00000504016 CDH22Q9UJ99 828 aa4.44□□□□□ -1.7
SUB1-204ENST00000504016 DNAJC16Q9Y2G8 782 aa4.44□□□□□ -1.7
SUB1-204ENST00000504016 A0A0G2JK05 382 aa4.43□□□□□ -1.7
SUB1-204ENST00000504016 TARSL2A2RTX5 802 aaKnown RBP4.43□□□□□ -1.7
SUB1-204ENST00000504016 TK1P04183 234 aa4.43□□□□□ -1.7
SUB1-204ENST00000504016 PLA2G2AP14555 144 aa4.43□□□□□ -1.7
SUB1-204ENST00000504016 ARSAP15289 507 aa4.43□□□□□ -1.7
SUB1-204ENST00000504016 ARRB2P32121 409 aa4.43□□□□□ -1.7
SUB1-204ENST00000504016 PNPLA4P41247 253 aa4.43□□□□□ -1.7
SUB1-204ENST00000504016 KCNJ4P48050 445 aa4.43□□□□□ -1.7
SUB1-204ENST00000504016 ALG10Q5BKT4 473 aa4.43□□□□□ -1.7
SUB1-204ENST00000504016 ALG10BQ5I7T1 473 aa4.43□□□□□ -1.7
SUB1-204ENST00000504016 SH2D4BQ5SQS7 431 aa4.43□□□□□ -1.7
SUB1-204ENST00000504016 FAM171A1Q5VUB5 890 aa4.43□□□□□ -1.7
SUB1-204ENST00000504016 ISM2Q6H9L7 571 aa4.43□□□□□ -1.7
SUB1-204ENST00000504016 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.43□□□□□ -1.7
SUB1-204ENST00000504016 HERC6Q8IVU3 1022 aa4.43□□□□□ -1.7
SUB1-204ENST00000504016 ANKRD44Q8N8A2 993 aa4.43□□□□□ -1.7
SUB1-204ENST00000504016 NPAS1Q99742 590 aa4.43□□□□□ -1.7
SUB1-204ENST00000504016 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.43□□□□□ -1.7
SUB1-204ENST00000504016 SPAG4Q9NPE6 437 aa4.43□□□□□ -1.7
SUB1-204ENST00000504016 TXLNGQ9NUQ3 528 aa4.43□□□□□ -1.7
SUB1-204ENST00000504016 SELENONQ9NZV5 590 aa4.43□□□□□ -1.7
SUB1-204ENST00000504016 ZNF335Q9H4Z2 1342 aaPredicted RBP4.43□□□□□ -1.7
SUB1-204ENST00000504016 A0A0A0MQY5 61 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 H0YGN5 161 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 EIF3FO00303 357 aaPredicted RBP4.42□□□□□ -1.7
SUB1-204ENST00000504016 ATG13O75143 517 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 MT3P25713 68 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 CNTFP26441 200 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 STAT1P42224 750 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 PTPN9P43378 593 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 RPS6KA3P51812 740 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 OAZ1P54368 228 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 ARHGAP8P85298 464 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 PPFIA1Q13136 1202 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 TDGQ13569 410 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 ZRSR2Q15696 482 aaKnown RBP4.42□□□□□ -1.7
SUB1-204ENST00000504016 FBXO43Q4G163 708 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 TTC39AQ5SRH9 613 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 TTLL5Q6EMB2 1281 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 CAPRIN2Q6IMN6 1127 aaKnown RBP4.42□□□□□ -1.7
SUB1-204ENST00000504016 RINLQ6ZS11 566 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 FAM217AQ8IXS0 508 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 IQCF1Q8N6M8 205 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 LRRC57Q8N9N7 239 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 ZBTB8BQ8NAP8 495 aaPredicted RBP4.42□□□□□ -1.7
SUB1-204ENST00000504016 MYRIPQ8NFW9 859 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 SPPL3Q8TCT6 385 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 LPAR1Q92633 364 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 CENPIQ92674 756 aaPredicted RBP4.42□□□□□ -1.7
SUB1-204ENST00000504016 SF3B5Q9BWJ5 86 aaKnown RBP4.42□□□□□ -1.7
SUB1-204ENST00000504016 CADM1Q9BY67 442 aaKnown RBP4.42□□□□□ -1.7
SUB1-204ENST00000504016 TWSG1Q9GZX9 223 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 HIPK3Q9H422 1215 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 SLC22A11Q9NSA0 550 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 TMLHEQ9NVH6 421 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 LUZP4Q9P127 313 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 UPB1Q9UBR1 384 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 DGKBQ9Y6T7 804 aa4.42□□□□□ -1.7
SUB1-204ENST00000504016 PEX12O00623 359 aa4.41□□□□□ -1.7
SUB1-204ENST00000504016 TNFRSF13BO14836 293 aaPredicted RBP4.41□□□□□ -1.7
SUB1-204ENST00000504016 SPTLC2O15270 562 aa4.41□□□□□ -1.7
SUB1-204ENST00000504016 KLK10O43240 276 aa4.41□□□□□ -1.7
SUB1-204ENST00000504016 CKMT1AP12532 417 aa4.41□□□□□ -1.7
SUB1-204ENST00000504016 SLC16A2P36021 539 aa4.41□□□□□ -1.7
SUB1-204ENST00000504016 MLH1P40692 756 aa4.41□□□□□ -1.7
SUB1-204ENST00000504016 PAPOLAP51003 745 aaKnown RBP4.41□□□□□ -1.7
SUB1-204ENST00000504016 BIRC3Q13489 604 aa4.41□□□□□ -1.7
SUB1-204ENST00000504016 BYSLQ13895 437 aaKnown RBP4.41□□□□□ -1.7
SUB1-204ENST00000504016 IL13RA2Q14627 380 aa4.41□□□□□ -1.7
SUB1-204ENST00000504016 TAF12Q16514 161 aa4.41□□□□□ -1.7
SUB1-204ENST00000504016 ZNF628Q5EBL2 1059 aa4.41□□□□□ -1.7
SUB1-204ENST00000504016 ZNF324BQ6AW86 544 aaPredicted RBP4.41□□□□□ -1.7
SUB1-204ENST00000504016 USP43Q70EL4 1123 aa4.41□□□□□ -1.7
SUB1-204ENST00000504016 CTU1Q7Z7A3 348 aaKnown RBP4.41□□□□□ -1.7
SUB1-204ENST00000504016 ZNF354CQ86Y25 554 aa4.41□□□□□ -1.7
SUB1-204ENST00000504016 EXOC8Q8IYI6 725 aa4.41□□□□□ -1.7
SUB1-204ENST00000504016 SCAIQ8N9R8 606 aa4.41□□□□□ -1.7
SUB1-204ENST00000504016 MIB2Q96AX9 1013 aa4.41□□□□□ -1.7
SUB1-204ENST00000504016 SDCCAG3Q96C92 435 aa4.41□□□□□ -1.7
SUB1-204ENST00000504016 RNFT2Q96EX2 444 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms