RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 ATP5C1P36542 298 aaKnown RBP21.73■■□□□ 1.07
UBE2D3-216ENST00000503742 KCNQ1P51787 676 aa21.73■■□□□ 1.07
UBE2D3-216ENST00000503742 GEMP55040 296 aa21.73■■□□□ 1.07
UBE2D3-216ENST00000503742 C5orf22Q49AR2 442 aa21.73■■□□□ 1.07
UBE2D3-216ENST00000503742 SPOUT1Q5T280 376 aaKnown RBP21.73■■□□□ 1.07
UBE2D3-216ENST00000503742 DENND5AQ6IQ26 1287 aa21.73■■□□□ 1.07
UBE2D3-216ENST00000503742 KLHDC10Q6PID8 442 aa21.73■■□□□ 1.07
UBE2D3-216ENST00000503742 TMCO2Q7Z6W1 182 aaPredicted RBP21.73■■□□□ 1.07
UBE2D3-216ENST00000503742 MYEOVQ96EZ4 313 aa21.73■■□□□ 1.07
UBE2D3-216ENST00000503742 KIFC1Q9BW19 673 aa21.73■■□□□ 1.07
UBE2D3-216ENST00000503742 KDM4CQ9H3R0 1056 aa21.73■■□□□ 1.07
UBE2D3-216ENST00000503742 IL1RAPL1Q9NZN1 696 aa21.73■■□□□ 1.07
UBE2D3-216ENST00000503742 ZFATQ9P243 1243 aa21.73■■□□□ 1.07
UBE2D3-216ENST00000503742 LRRC26Q2I0M4 334 aa21.72■■□□□ 1.07
UBE2D3-216ENST00000503742 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.72■■□□□ 1.07
UBE2D3-216ENST00000503742 ANKLE1Q8NAG6 615 aa21.72■■□□□ 1.07
UBE2D3-216ENST00000503742 MFSD3Q96ES6 412 aa21.72■■□□□ 1.07
UBE2D3-216ENST00000503742 TMEM169Q96HH4 297 aa21.72■■□□□ 1.07
UBE2D3-216ENST00000503742 MYRFLQ96LU7 910 aa21.72■■□□□ 1.07
UBE2D3-216ENST00000503742 RPRD1AQ96P16 312 aaPredicted RBP21.72■■□□□ 1.07
UBE2D3-216ENST00000503742 CPNE1Q99829 537 aa21.72■■□□□ 1.07
UBE2D3-216ENST00000503742 CHRAC1Q9NRG0 131 aa21.72■■□□□ 1.07
UBE2D3-216ENST00000503742 ARL2BPQ9Y2Y0 163 aa21.72■■□□□ 1.07
UBE2D3-216ENST00000503742 J3KR12 359 aa21.72■■□□□ 1.07
UBE2D3-216ENST00000503742 TACR2P21452 398 aa21.72■■□□□ 1.07
UBE2D3-216ENST00000503742 GJA8P48165 433 aa21.72■■□□□ 1.07
UBE2D3-216ENST00000503742 RENBPP51606 427 aa21.72■■□□□ 1.07
UBE2D3-216ENST00000503742 TNK2Q07912 1038 aa21.72■■□□□ 1.07
UBE2D3-216ENST00000503742 LACTB2Q53H82 288 aaPredicted RBP21.72■■□□□ 1.07
UBE2D3-216ENST00000503742 CCDC117Q8IWD4 279 aaPredicted RBP21.72■■□□□ 1.07
UBE2D3-216ENST00000503742 ZNF512Q96ME7 567 aaPredicted RBP21.72■■□□□ 1.07
UBE2D3-216ENST00000503742 SLC25A51Q9H1U9 297 aa21.72■■□□□ 1.07
UBE2D3-216ENST00000503742 GJB5O95377 273 aa21.71■■□□□ 1.07
UBE2D3-216ENST00000503742 TIMP1P01033 207 aa21.71■■□□□ 1.07
UBE2D3-216ENST00000503742 CRHR1P34998 444 aa21.71■■□□□ 1.07
UBE2D3-216ENST00000503742 GP5P40197 560 aa21.71■■□□□ 1.07
UBE2D3-216ENST00000503742 MAPKAPK2P49137 400 aa21.71■■□□□ 1.07
UBE2D3-216ENST00000503742 TEDDM1Q5T9Z0 273 aa21.71■■□□□ 1.07
UBE2D3-216ENST00000503742 CMTR2Q8IYT2 770 aaKnown RBP21.71■■□□□ 1.07
UBE2D3-216ENST00000503742 TEX26Q8N6G2 289 aa21.71■■□□□ 1.07
UBE2D3-216ENST00000503742 IPMKQ8NFU5 416 aa21.71■■□□□ 1.07
UBE2D3-216ENST00000503742 ACMSDQ8TDX5 336 aa21.71■■□□□ 1.07
UBE2D3-216ENST00000503742 ENTPD7Q9NQZ7 604 aa21.71■■□□□ 1.07
UBE2D3-216ENST00000503742 WDR91A4D1P6 747 aa21.7■■□□□ 1.07
UBE2D3-216ENST00000503742 ALDOAP04075 364 aaKnown RBP21.7■■□□□ 1.07
UBE2D3-216ENST00000503742 ITGA2BP08514 1039 aa21.7■■□□□ 1.07
UBE2D3-216ENST00000503742 MAGEA9P43362 315 aa21.7■■□□□ 1.07
UBE2D3-216ENST00000503742 WDR5P61964 334 aaKnown RBP21.7■■□□□ 1.07
UBE2D3-216ENST00000503742 SPRED3Q2MJR0 410 aa21.7■■□□□ 1.07
UBE2D3-216ENST00000503742 PARP15Q460N3 678 aa21.7■■□□□ 1.07
UBE2D3-216ENST00000503742 HECTD3Q5T447 861 aa21.7■■□□□ 1.07
UBE2D3-216ENST00000503742 GRTP1Q5TC63 336 aa21.7■■□□□ 1.07
UBE2D3-216ENST00000503742 FAM117BQ6P1L5 589 aa21.7■■□□□ 1.07
UBE2D3-216ENST00000503742 TRPM8Q7Z2W7 1104 aa21.7■■□□□ 1.07
UBE2D3-216ENST00000503742 CIR1Q86X95 450 aaPredicted RBP21.7■■□□□ 1.07
UBE2D3-216ENST00000503742 NDUFAF2Q8N183 169 aa21.7■■□□□ 1.07
UBE2D3-216ENST00000503742 PTPRN2Q92932 1015 aa21.7■■□□□ 1.07
UBE2D3-216ENST00000503742 PAWRQ96IZ0 340 aaKnown RBP21.7■■□□□ 1.07
UBE2D3-216ENST00000503742 MRGPRX2Q96LB1 330 aa21.7■■□□□ 1.07
UBE2D3-216ENST00000503742 PLCD4Q9BRC7 762 aa21.7■■□□□ 1.07
UBE2D3-216ENST00000503742 FICDQ9BVA6 458 aa21.7■■□□□ 1.07
UBE2D3-216ENST00000503742 IQCGQ9H095 443 aaKnown RBP21.7■■□□□ 1.07
UBE2D3-216ENST00000503742 C11orf49Q9H6J7 331 aa21.7■■□□□ 1.07
UBE2D3-216ENST00000503742 MANSC1Q9H8J5 431 aa21.7■■□□□ 1.07
UBE2D3-216ENST00000503742 PCMTD2Q9NV79 361 aa21.7■■□□□ 1.07
UBE2D3-216ENST00000503742 YIPF1Q9Y548 306 aa21.7■■□□□ 1.07
UBE2D3-216ENST00000503742 TRIM43BA6NCK2 446 aa21.7■■□□□ 1.06
UBE2D3-216ENST00000503742 ACSL4O60488 711 aa21.7■■□□□ 1.06
UBE2D3-216ENST00000503742 CSF2RAP15509 400 aa21.7■■□□□ 1.06
UBE2D3-216ENST00000503742 LAG3P18627 525 aa21.7■■□□□ 1.06
UBE2D3-216ENST00000503742 NMBRP28336 390 aa21.7■■□□□ 1.06
UBE2D3-216ENST00000503742 SERPINB4P48594 390 aa21.7■■□□□ 1.06
UBE2D3-216ENST00000503742 YBEYP58557 167 aaPredicted RBP21.7■■□□□ 1.06
UBE2D3-216ENST00000503742 MPP3Q13368 585 aa21.7■■□□□ 1.06
UBE2D3-216ENST00000503742 RAB33AQ14088 237 aa21.7■■□□□ 1.06
UBE2D3-216ENST00000503742 BTG3Q14201 252 aaPredicted RBP21.7■■□□□ 1.06
UBE2D3-216ENST00000503742 FAM133BQ5BKY9 247 aaKnown RBP21.7■■□□□ 1.06
UBE2D3-216ENST00000503742 PCID2Q5JVF3 399 aa21.7■■□□□ 1.06
UBE2D3-216ENST00000503742 RANBP10Q6VN20 620 aa21.7■■□□□ 1.06
UBE2D3-216ENST00000503742 DDX53Q86TM3 631 aaKnown RBP21.7■■□□□ 1.06
UBE2D3-216ENST00000503742 C10orf67Q8IYJ2 551 aa21.7■■□□□ 1.06
UBE2D3-216ENST00000503742 PSMG2Q969U7 264 aa21.7■■□□□ 1.06
UBE2D3-216ENST00000503742 TRIM43Q96BQ3 446 aaPredicted RBP21.7■■□□□ 1.06
UBE2D3-216ENST00000503742 ARMC5Q96C12 935 aa21.7■■□□□ 1.06
UBE2D3-216ENST00000503742 TRMT2BQ96GJ1 504 aaKnown RBP21.7■■□□□ 1.06
UBE2D3-216ENST00000503742 SLC13A1Q9BZW2 595 aa21.7■■□□□ 1.06
UBE2D3-216ENST00000503742 CYP4F11Q9HBI6 524 aa21.7■■□□□ 1.06
UBE2D3-216ENST00000503742 CHD5Q8TDI0 1954 aa21.69■■□□□ 1.06
UBE2D3-216ENST00000503742 COCHO43405 550 aa21.69■■□□□ 1.06
UBE2D3-216ENST00000503742 RAMP2O60895 175 aa21.69■■□□□ 1.06
UBE2D3-216ENST00000503742 NEBLO76041 1014 aa21.69■■□□□ 1.06
UBE2D3-216ENST00000503742 SLC6A4P31645 630 aa21.69■■□□□ 1.06
UBE2D3-216ENST00000503742 SLC10A7Q0GE19 358 aa21.69■■□□□ 1.06
UBE2D3-216ENST00000503742 SERINC3Q13530 473 aa21.69■■□□□ 1.06
UBE2D3-216ENST00000503742 POLD3Q15054 466 aaPredicted RBP21.69■■□□□ 1.06
UBE2D3-216ENST00000503742 MARC1Q5VT66 337 aa21.69■■□□□ 1.06
UBE2D3-216ENST00000503742 KDELC1Q6UW63 502 aa21.69■■□□□ 1.06
UBE2D3-216ENST00000503742 OTOAQ7RTW8 1153 aa21.69■■□□□ 1.06
UBE2D3-216ENST00000503742 CCDC63Q8NA47 563 aa21.69■■□□□ 1.06
UBE2D3-216ENST00000503742 IMP4Q96G21 291 aaKnown RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms