RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 MAGEA4P43358 317 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 YBEYP58557 167 aaPredicted RBP7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 GPX6P59796 221 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 ARF5P84085 180 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 DLX2Q07687 328 aaPredicted RBP7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 IL10RBQ08334 325 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 PDIA2Q13087 525 aaKnown RBP7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 SPARCL1Q14515 664 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 SLC29A2Q14542 456 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 SLMAPQ14BN4 828 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 HIF1AQ16665 826 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 KYNUQ16719 465 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 PARP6Q2NL67 630 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 SPDYCQ5MJ68 293 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 RARS2Q5T160 578 aaKnown RBP7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 TTC39BQ5VTQ0 682 aaPredicted RBP7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 FYB2Q5VWT5 728 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 ANKRD54Q6NXT1 300 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 C4orf22Q6V702 233 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 PID1Q7Z2X4 250 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 GPR149Q86SP6 731 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 SETD3Q86TU7 594 aaPredicted RBP7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 LRRC49Q8IUZ0 686 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 ARID3BQ8IVW6 561 aaPredicted RBP7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 MPP5Q8N3R9 675 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 EFHBQ8N7U6 833 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 PDCD7Q8N8D1 485 aaKnown RBP7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 TDRD5Q8NAT2 981 aaKnown RBP7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 HJURPQ8NCD3 748 aaPredicted RBP7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 MCUQ8NE86 351 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 TTC16Q8NEE8 873 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 SPATA22Q8NHS9 363 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 UBLCP1Q8WVY7 318 aaPredicted RBP7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 EXOC4Q96A65 974 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 TADA1Q96BN2 335 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 ASIC4Q96FT7 647 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 C9orf72Q96LT7 481 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 NSMCE3Q96MG7 304 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 VAT1Q99536 393 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 SH3GL2Q99962 352 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 TRIM56Q9BRZ2 755 aaKnown RBP7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 ACE2Q9BYF1 805 aaPredicted RBP7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 PHACTR1Q9C0D0 580 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 MAGEH1Q9H213 219 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 LINC00597Q9H2U6 94 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 ZNF576Q9H609 170 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 NSUN3Q9H649 340 aaKnown RBP7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 IGFLR1Q9H665 355 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 RETREG1Q9H6L5 497 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 SAYSD1Q9NPB0 183 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 TDP1Q9NUW8 608 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 DZANK1Q9NVP4 752 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 CLEC1BQ9P126 229 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 DPP7Q9UHL4 492 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 RSPH14Q9UHP6 348 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 TRHDEQ9UKU6 1024 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 PLAAQ9Y263 795 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 SH3BP1Q9Y3L3 701 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 TEX264Q9Y6I9 313 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 C5orf42Q9H799 3197 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 BRWD1Q9NSI6 2320 aa7.04□□□□□ -1.28
TOPBP1-203ENST00000503464 SCN8AQ9UQD0 1980 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 ILVBLA1L0T0 632 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 TTC24A2A3L6 582 aaPredicted RBP7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 GOLGA6BA6NDN3 693 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 SMAPO00193 183 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 KDELR3O43731 214 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 SNAP91O60641 907 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 USP12O75317 370 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 ZNF189O75820 626 aaPredicted RBP7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 STK10O94804 968 aaKnown RBP7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 SUN1O94901 812 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 ACSL3O95573 720 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 AP2A1O95782 977 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 TTC4O95801 387 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 MT-CYBP00156 380 aaPredicted RBP7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 PENKP01210 267 aaPredicted RBP7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 RHOCP08134 193 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 GCAP28676 217 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 WEE1P30291 646 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 ADRA1AP35348 466 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 ACTN2P35609 894 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 LTBRP36941 435 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 AVPR1AP37288 418 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 CSKP41240 450 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 VIPR2P41587 438 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 ELK3P41970 407 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 RGRP47804 291 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 IFNAR2P48551 515 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 ARL4CP56559 192 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 MAXP61244 160 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 FAM193AP78312 1265 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 DSC2Q02487 901 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 NIPAL4Q0D2K0 466 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 ADAM15Q13444 863 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 HNRNPDQ14103 355 aaKnown RBP7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 ADGRE1Q14246 886 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 COL19A1Q14993 1142 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 CTC1Q2NKJ3 1217 aa7.03□□□□□ -1.28
TOPBP1-203ENST00000503464 ARHGAP15Q53QZ3 475 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms