RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 ADAD1Q96M93 576 aaKnown RBP2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 SEC62Q99442 399 aaKnown RBP2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 CTDSP1Q9GZU7 261 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 STN1Q9H668 368 aaKnown RBP2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 ACAD9Q9H845 621 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 MLXIPLQ9NP71 852 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 SLC22A11Q9NSA0 550 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 ARL15Q9NXU5 204 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 ZNF69Q9UC07 566 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 SUFUQ9UMX1 484 aa2.67□□□□□ -1.98
HMGB1P35-201ENST00000503360 CCDC196A0A1B0GTZ2 297 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 SLC22A23A1A5C7 686 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 C4orf47A7E2U8 309 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 MCIDASD6RGH6 385 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 J3KRW8 73 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 DHX16O60231 1041 aaKnown RBP2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 CCNT1O60563 726 aaKnown RBP2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 TULP3O75386 442 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 SGPL1O95470 568 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 METTL18O95568 372 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 CRYABP02511 175 aaKnown RBP2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 HNRNPA1P09651 372 aaKnown RBP eCLIP2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 IFIT1P09914 478 aaKnown RBP2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 CYP4B1P13584 511 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 ARSAP15289 507 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 RPS6KB1P23443 525 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 HOXA7P31268 230 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 LIFRP42702 1097 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 MVDP53602 400 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 OAZ1P54368 228 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 ARHGAP8P85298 464 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 GHRHRQ02643 423 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 GOLGA8FQ08AF8 430 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 TDGQ13569 410 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 ZNF268Q14587 947 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 NFIL3Q16649 462 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 GXYLT1Q4G148 440 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 SH2D4BQ5SQS7 431 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 WDR78Q5VTH9 848 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 LIPMQ5VYY2 423 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 RETSATQ6NUM9 610 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 SLC30A9Q6PML9 568 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 RTL10Q7L3V2 364 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 PIM3Q86V86 326 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 BRSK2Q8IWQ3 736 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 PAQR4Q8N4S7 273 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 FAM110DQ8TAY7 271 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 C2CD4CQ8TF44 421 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 ZFPM2Q8WW38 1151 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 IP6K1Q92551 441 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 MAP4K1Q92918 833 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 RRP36Q96EU6 259 aaKnown RBP2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 RNFT2Q96EX2 444 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 FAM84BQ96KN1 310 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 MEIS3Q99687 375 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 SLC26A6Q9BXS9 759 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 SLCO5A1Q9H2Y9 848 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 FOXP1Q9H334 677 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 IL21RQ9HBE5 538 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 ERVK-5Q9HDB9 667 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 TXNRD2Q9NNW7 524 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 UBN1Q9NPG3 1134 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 SWAP70Q9UH65 585 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 IPO11Q9UI26 975 aaKnown RBP2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 CD207Q9UJ71 328 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 FBXO4Q9UKT5 387 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 HSF4Q9ULV5 492 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 SLC8A2Q9UPR5 921 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 TNFSF13BQ9Y275 285 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 DTX4Q9Y2E6 619 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 PKP3Q9Y446 797 aa2.66□□□□□ -1.98
HMGB1P35-201ENST00000503360 TCRBV7S3A2A0A539 114 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 CXorf65A6NEN9 183 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 SH2D7A6NKC9 451 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 EPB41L2O43491 1005 aaKnown RBP2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 USP12O75317 370 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 NFATC1O95644 943 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 CD63P08962 238 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 ATP1A3P13637 1013 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 TFEBP19484 476 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 PRKCHP24723 683 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 TYK2P29597 1187 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 PSMC2P35998 433 aaKnown RBP2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 ME1P48163 572 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 NR1H2P55055 460 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 ZBTB16Q05516 673 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 LMOD3Q0VAK6 560 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 GALNT2Q10471 571 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 TBL3Q12788 808 aaKnown RBP2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 DDX10Q13206 875 aaKnown RBP2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 STIM1Q13586 685 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 BYSLQ13895 437 aaKnown RBP2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 AP5B1Q2VPB7 878 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 EARS2Q5JPH6 523 aaKnown RBP2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 C10orf76Q5T2E6 689 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 SLC9C2Q5TAH2 1124 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 LRRC8DQ7L1W4 858 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 UBE2Q1Q7Z7E8 422 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 GALNT7Q86SF2 657 aa2.65□□□□□ -1.99
HMGB1P35-201ENST00000503360 KLBQ86Z14 1044 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms