RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 CHRNA3P32297 505 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 STK19P49842 368 aaPredicted RBP6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 DUSP3P51452 185 aaPredicted RBP6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 TAS2R38P59533 333 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 BPIFB4P59827 614 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 PPP2CBP62714 309 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 PPP2CAP67775 309 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 INSM1Q01101 510 aaPredicted RBP6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 IL9RQ01113 521 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 SLC6A3Q01959 620 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 NRG1Q02297 640 aaPredicted RBP6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 PTK2Q05397 1052 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 C19orf57Q0VDD7 668 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 KCNMA1Q12791 1236 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 BNIP3Q12983 259 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 DNAJC3Q13217 504 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 ZNF177Q13360 481 aaPredicted RBP6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 DLG2Q15700 870 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 TBC1D25Q3MII6 688 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 TMEM259Q4ZIN3 620 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 HS1BP3Q53T59 392 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 KIAA1161Q6NSJ0 714 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 DENND1BQ6P3S1 775 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 GBP6Q6ZN66 633 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 HORMAD1Q86X24 394 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 DEFB106AQ8N104 65 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 SLC25A45Q8N413 288 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 ZNF248Q8NDW4 579 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 OR2A12Q8NGT7 310 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 TPCN2Q8NHX9 752 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 WDR48Q8TAF3 677 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 ADAM32Q8TC27 787 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 NELFBQ8WX92 580 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 RNF34Q969K3 372 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 RAB7BQ96AH8 199 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 ISG20Q96AZ6 181 aaKnown RBP6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 PPP1R16AQ96I34 528 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 HIC2Q96JB3 615 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 LENG8Q96PV6 779 aaPredicted RBP6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 HAPLN3Q96S86 360 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 CPXM1Q96SM3 734 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 NPY6RQ99463 290 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 DPH1Q9BZG8 443 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 FAM204AQ9H8W3 233 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 GDPD2Q9HCC8 539 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 DDIT4Q9NX09 232 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 PPARGC1AQ9UBK2 798 aaKnown RBP6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 RWDD2AQ9UIY3 292 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 VPS28Q9UK41 221 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 HS3ST4Q9Y661 456 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 PTPRQQ9UMZ3 2332 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 TDRD6O60522 2096 aaKnown RBP6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 ILVBLA1L0T0 632 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 GOLGA8CPA6NN73 597 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 A6NNZ2 444 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 SCAMP1O15126 338 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 SIGLEC6O43699 453 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 PAGE1O75459 146 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 ZNF821O75541 412 aaPredicted RBP6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 TCEA3O75764 348 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 PIAS2O75928 621 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 ENDOD1O94919 500 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 MT-CO3P00414 261 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 CTSLP07711 333 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 THEGLP0DJG4 465 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 ALPPL2P10696 532 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 KRT5P13647 590 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 NME1P15531 152 aaKnown RBP6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 GLDCP23378 1020 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 DGKAP23743 735 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 ITGB7P26010 798 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 AKT2P31751 481 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 ETFBP38117 255 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 LSSP48449 732 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 GEMIN4P57678 1058 aaKnown RBP6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 HNRNPKP61978 463 aaKnown RBP eCLIP6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 RPS21P63220 83 aaKnown RBP6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 PITX1P78337 314 aaPredicted RBP6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 SKOR1P84550 965 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 TLE3Q04726 772 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 TAF5Q15542 800 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 EXOC3L4Q17RC7 722 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 ZNF284Q2VY69 593 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 SLC25A52Q3SY17 297 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 ARTNQ5T4W7 220 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 RETSATQ6NUM9 610 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 ZCCHC8Q6NZY4 707 aaKnown RBP6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 LRRC31Q6UY01 552 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 KYAT3Q6YP21 454 aaKnown RBP6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 ERN2Q76MJ5 926 aaKnown RBP6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 GPR155Q7Z3F1 870 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 ERICH1Q86X53 443 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 FAM71AQ8IYT1 594 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 SDR16C5Q8N3Y7 309 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 PCDH20Q8N6Y1 951 aaKnown RBP6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 DENND6BQ8NEG7 585 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 OR52K2Q8NGK3 314 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 DEPDC7Q96QD5 511 aa6.25□□□□□ -1.41
LSM3P4-201ENST00000502948 PSMB7Q99436 277 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms