RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 SMAD6O43541 496 aaKnown RBP25.64■■□□□ 1.69
LSM6-202ENST00000502781 CCDC175P0C221 793 aa25.64■■□□□ 1.69
LSM6-202ENST00000502781 VAV1P15498 845 aa25.64■■□□□ 1.69
LSM6-202ENST00000502781 NAP1L1P55209 391 aaKnown RBP25.64■■□□□ 1.69
LSM6-202ENST00000502781 IFI16Q16666 785 aaKnown RBP25.64■■□□□ 1.69
LSM6-202ENST00000502781 TMPRSS6Q8IU80 811 aa25.64■■□□□ 1.69
LSM6-202ENST00000502781 RNF10Q8N5U6 811 aaKnown RBP25.64■■□□□ 1.69
LSM6-202ENST00000502781 KIAA1524Q8TCG1 905 aa25.64■■□□□ 1.69
LSM6-202ENST00000502781 TPSD1Q9BZJ3 242 aa25.64■■□□□ 1.69
LSM6-202ENST00000502781 TSGA10Q9BZW7 698 aa25.64■■□□□ 1.69
LSM6-202ENST00000502781 SLC6A17Q9H1V8 727 aa25.64■■□□□ 1.69
LSM6-202ENST00000502781 RSPH9Q9H1X1 276 aaPredicted RBP25.64■■□□□ 1.69
LSM6-202ENST00000502781 BCCIPQ9P287 314 aaKnown RBP eCLIP25.64■■□□□ 1.69
LSM6-202ENST00000502781 ACTL7AQ9Y615 435 aa25.64■■□□□ 1.69
LSM6-202ENST00000502781 R4GN57 208 aa25.64■■□□□ 1.69
LSM6-202ENST00000502781 NUP205Q92621 2012 aa25.63■■□□□ 1.69
LSM6-202ENST00000502781 ARHGAP42A6NI28 874 aa25.63■■□□□ 1.69
LSM6-202ENST00000502781 ZBTB24O43167 697 aaPredicted RBP25.63■■□□□ 1.69
LSM6-202ENST00000502781 HRO43593 1189 aa25.63■■□□□ 1.69
LSM6-202ENST00000502781 ZNF821O75541 412 aaPredicted RBP25.63■■□□□ 1.69
LSM6-202ENST00000502781 PAPOLAP51003 745 aaKnown RBP25.63■■□□□ 1.69
LSM6-202ENST00000502781 GEMIN4P57678 1058 aaKnown RBP25.63■■□□□ 1.69
LSM6-202ENST00000502781 TP53INP2Q8IXH6 220 aa25.63■■□□□ 1.69
LSM6-202ENST00000502781 PQLC3Q8N755 202 aa25.63■■□□□ 1.69
LSM6-202ENST00000502781 RNF157Q96PX1 679 aa25.63■■□□□ 1.69
LSM6-202ENST00000502781 FAM129BQ96TA1 746 aa25.63■■□□□ 1.69
LSM6-202ENST00000502781 CEP44Q9C0F1 390 aa25.63■■□□□ 1.69
LSM6-202ENST00000502781 PRDM16Q9HAZ2 1276 aa25.63■■□□□ 1.69
LSM6-202ENST00000502781 PDFQ9HBH1 243 aa25.63■■□□□ 1.69
LSM6-202ENST00000502781 KRT86O43790 486 aa25.62■■□□□ 1.69
LSM6-202ENST00000502781 KRT1P04264 644 aa25.62■■□□□ 1.69
LSM6-202ENST00000502781 SERPINB6P35237 376 aa25.62■■□□□ 1.69
LSM6-202ENST00000502781 NHLH1Q02575 133 aa25.62■■□□□ 1.69
LSM6-202ENST00000502781 PAFAH1B3Q15102 231 aaKnown RBP25.62■■□□□ 1.69
LSM6-202ENST00000502781 TAZQ16635 292 aa25.62■■□□□ 1.69
LSM6-202ENST00000502781 ACCSLQ4AC99 568 aa25.62■■□□□ 1.69
LSM6-202ENST00000502781 ZFYVE27Q5T4F4 411 aa25.62■■□□□ 1.69
LSM6-202ENST00000502781 NCBP2-AS2Q69YL0 99 aa25.62■■□□□ 1.69
LSM6-202ENST00000502781 C22orf39Q6P5X5 142 aa25.62■■□□□ 1.69
LSM6-202ENST00000502781 KATNAL2Q8IYT4 538 aa25.62■■□□□ 1.69
LSM6-202ENST00000502781 ISG20Q96AZ6 181 aaKnown RBP25.62■■□□□ 1.69
LSM6-202ENST00000502781 FAM86C1Q9NVL1 165 aa25.62■■□□□ 1.69
LSM6-202ENST00000502781 PRAMEF11O60813 436 aa25.61■■□□□ 1.69
LSM6-202ENST00000502781 TNNT1P13805 278 aa25.61■■□□□ 1.69
LSM6-202ENST00000502781 CTNNA1P35221 906 aaKnown RBP25.61■■□□□ 1.69
LSM6-202ENST00000502781 P2RY2P41231 377 aa25.61■■□□□ 1.69
LSM6-202ENST00000502781 MARCKSL1P49006 195 aa25.61■■□□□ 1.69
LSM6-202ENST00000502781 ELAVL3Q14576 367 aaKnown RBP25.61■■□□□ 1.69
LSM6-202ENST00000502781 INO80DQ53TQ3 878 aaPredicted RBP25.61■■□□□ 1.69
LSM6-202ENST00000502781 Q6ZVU0 165 aa25.61■■□□□ 1.69
LSM6-202ENST00000502781 PGBD3Q8N328 593 aa25.61■■□□□ 1.69
LSM6-202ENST00000502781 GAB3Q8WWW8 586 aa25.61■■□□□ 1.69
LSM6-202ENST00000502781 CASKIN2Q8WXE0 1202 aa25.61■■□□□ 1.69
LSM6-202ENST00000502781 KRT35Q92764 455 aa25.61■■□□□ 1.69
LSM6-202ENST00000502781 SIPA1Q96FS4 1042 aa25.61■■□□□ 1.69
LSM6-202ENST00000502781 KCNF1Q9H3M0 494 aa25.61■■□□□ 1.69
LSM6-202ENST00000502781 PCDHA3Q9Y5H8 950 aa25.61■■□□□ 1.69
LSM6-202ENST00000502781 PALMO75781 387 aa25.6■■□□□ 1.69
LSM6-202ENST00000502781 CTNNA2P26232 953 aa25.6■■□□□ 1.69
LSM6-202ENST00000502781 RPS14P62263 151 aaKnown RBP25.6■■□□□ 1.69
LSM6-202ENST00000502781 ZBTB16Q05516 673 aa25.6■■□□□ 1.69
LSM6-202ENST00000502781 MAP7D1Q3KQU3 841 aa25.6■■□□□ 1.69
LSM6-202ENST00000502781 USP39Q53GS9 565 aaKnown RBP25.6■■□□□ 1.69
LSM6-202ENST00000502781 MFSD7Q6UXD7 560 aa25.6■■□□□ 1.69
LSM6-202ENST00000502781 NT5DC3Q86UY8 548 aa25.6■■□□□ 1.69
LSM6-202ENST00000502781 PLPP6Q8IY26 295 aa25.6■■□□□ 1.69
LSM6-202ENST00000502781 STK40Q8N2I9 435 aa25.6■■□□□ 1.69
LSM6-202ENST00000502781 PCDH20Q8N6Y1 951 aaKnown RBP25.6■■□□□ 1.69
LSM6-202ENST00000502781 NETO2Q8NC67 525 aa25.6■■□□□ 1.69
LSM6-202ENST00000502781 OR2A12Q8NGT7 310 aa25.6■■□□□ 1.69
LSM6-202ENST00000502781 RNF25Q96BH1 459 aaPredicted RBP25.6■■□□□ 1.69
LSM6-202ENST00000502781 EPC1Q9H2F5 836 aa25.6■■□□□ 1.69
LSM6-202ENST00000502781 USP36Q9P275 1121 aaKnown RBP25.6■■□□□ 1.69
LSM6-202ENST00000502781 FCF1Q9Y324 198 aaKnown RBP25.6■■□□□ 1.69
LSM6-202ENST00000502781 CAPN6Q9Y6Q1 641 aa25.6■■□□□ 1.69
LSM6-202ENST00000502781 PROB1E7EW31 1015 aa25.59■■□□□ 1.69
LSM6-202ENST00000502781 J3KR12 359 aa25.59■■□□□ 1.69
LSM6-202ENST00000502781 MCF2LO15068 1137 aa25.59■■□□□ 1.69
LSM6-202ENST00000502781 ALOX15BO15296 676 aa25.59■■□□□ 1.69
LSM6-202ENST00000502781 ZNF217O75362 1048 aa25.59■■□□□ 1.69
LSM6-202ENST00000502781 SRSF5Q13243 272 aaKnown RBP25.59■■□□□ 1.69
LSM6-202ENST00000502781 ZNF776Q68DI1 518 aaPredicted RBP25.59■■□□□ 1.69
LSM6-202ENST00000502781 SLC9A4Q6AI14 798 aa25.59■■□□□ 1.69
LSM6-202ENST00000502781 ARHGAP36Q6ZRI8 547 aa25.59■■□□□ 1.69
LSM6-202ENST00000502781 ZNF354CQ86Y25 554 aa25.59■■□□□ 1.69
LSM6-202ENST00000502781 SYCE1Q8N0S2 351 aa25.59■■□□□ 1.69
LSM6-202ENST00000502781 PRCCQ92733 491 aaPredicted RBP25.59■■□□□ 1.69
LSM6-202ENST00000502781 SEMA4AQ9H3S1 761 aa25.59■■□□□ 1.69
LSM6-202ENST00000502781 ITM2CQ9NQX7 267 aa25.59■■□□□ 1.69
LSM6-202ENST00000502781 IPO11Q9UI26 975 aaKnown RBP25.59■■□□□ 1.69
LSM6-202ENST00000502781 GUCA1BQ9UMX6 200 aa25.59■■□□□ 1.69
LSM6-202ENST00000502781 PPP2R2CQ9Y2T4 447 aa25.59■■□□□ 1.69
LSM6-202ENST00000502781 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.59■■□□□ 1.69
LSM6-202ENST00000502781 GPR179Q6PRD1 2367 aa25.59■■□□□ 1.69
LSM6-202ENST00000502781 EML5Q05BV3 1969 aa25.59■■□□□ 1.69
LSM6-202ENST00000502781 DFFAO00273 331 aa25.58■■□□□ 1.69
LSM6-202ENST00000502781 MFSD11O43934 449 aa25.58■■□□□ 1.69
LSM6-202ENST00000502781 RPP40O75818 363 aaKnown RBP25.58■■□□□ 1.69
LSM6-202ENST00000502781 IGLV3-19P01714 112 aa25.58■■□□□ 1.69
LSM6-202ENST00000502781 CDKN2BP42772 138 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms