RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 MYOCQ99972 504 aa13□□□□□ -0.33
LMNA-218ENST00000502357 OSBPL2Q9H1P3 480 aa13□□□□□ -0.33
LMNA-218ENST00000502357 USP29Q9HBJ7 922 aa13□□□□□ -0.33
LMNA-218ENST00000502357 PNMA8BQ9ULN7 279 aaPredicted RBP13□□□□□ -0.33
LMNA-218ENST00000502357 HS3ST2Q9Y278 367 aa13□□□□□ -0.33
LMNA-218ENST00000502357 TBC1D30Q9Y2I9 924 aa13□□□□□ -0.33
LMNA-218ENST00000502357 PCDHB4Q9Y5E5 795 aa13□□□□□ -0.33
LMNA-218ENST00000502357 COL12A1Q99715 3063 aa12.99□□□□□ -0.33
LMNA-218ENST00000502357 UBR5O95071 2799 aaPredicted RBP12.99□□□□□ -0.33
LMNA-218ENST00000502357 EME2A4GXA9 379 aaPredicted RBP12.99□□□□□ -0.33
LMNA-218ENST00000502357 TRIM49BA6NDI0 452 aa12.99□□□□□ -0.33
LMNA-218ENST00000502357 POM121BA6NF01 834 aa12.99□□□□□ -0.33
LMNA-218ENST00000502357 TCAF2A6NFQ2 919 aa12.99□□□□□ -0.33
LMNA-218ENST00000502357 K7ERQ8 282 aa12.99□□□□□ -0.33
LMNA-218ENST00000502357 RAD51BO15315 384 aa12.99□□□□□ -0.33
LMNA-218ENST00000502357 CSF2P04141 144 aa12.99□□□□□ -0.33
LMNA-218ENST00000502357 CLN3Q13286 438 aa12.99□□□□□ -0.33
LMNA-218ENST00000502357 ARL13BQ3SXY8 428 aa12.99□□□□□ -0.33
LMNA-218ENST00000502357 TCERG1LQ5VWI1 586 aa12.99□□□□□ -0.33
LMNA-218ENST00000502357 SEL1L3Q68CR1 1132 aa12.99□□□□□ -0.33
LMNA-218ENST00000502357 C14orf80Q86SX3 495 aa12.99□□□□□ -0.33
LMNA-218ENST00000502357 CLEC14AQ86T13 490 aa12.99□□□□□ -0.33
LMNA-218ENST00000502357 WDTC1Q8N5D0 677 aa12.99□□□□□ -0.33
LMNA-218ENST00000502357 TMIEQ8NEW7 156 aa12.99□□□□□ -0.33
LMNA-218ENST00000502357 IFI44Q8TCB0 444 aa12.99□□□□□ -0.33
LMNA-218ENST00000502357 ATXN7L3BQ96GX2 97 aa12.99□□□□□ -0.33
LMNA-218ENST00000502357 SLC2A13Q96QE2 648 aa12.99□□□□□ -0.33
LMNA-218ENST00000502357 KLF6Q99612 283 aaPredicted RBP12.99□□□□□ -0.33
LMNA-218ENST00000502357 ANLNQ9NQW6 1124 aa12.99□□□□□ -0.33
LMNA-218ENST00000502357 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.99□□□□□ -0.33
LMNA-218ENST00000502357 CEP83Q9Y592 693 aa12.99□□□□□ -0.33
LMNA-218ENST00000502357 PCDHGA8Q9Y5G5 932 aa12.99□□□□□ -0.33
LMNA-218ENST00000502357 SPTY2D1-AS1A0A0U1RR47 76 aa12.98□□□□□ -0.33
LMNA-218ENST00000502357 E5RJQ4 531 aa12.98□□□□□ -0.33
LMNA-218ENST00000502357 C1QTNF3-AMACRE9PGA6 284 aa12.98□□□□□ -0.33
LMNA-218ENST00000502357 F5H5T6 163 aa12.98□□□□□ -0.33
LMNA-218ENST00000502357 SPINT1O43278 529 aa12.98□□□□□ -0.33
LMNA-218ENST00000502357 SMAD6O43541 496 aaKnown RBP12.98□□□□□ -0.33
LMNA-218ENST00000502357 ZNF202O95125 648 aa12.98□□□□□ -0.33
LMNA-218ENST00000502357 NME1P15531 152 aaKnown RBP12.98□□□□□ -0.33
LMNA-218ENST00000502357 HNRNPA2B1P22626 353 aaKnown RBP12.98□□□□□ -0.33
LMNA-218ENST00000502357 CHRNA3P32297 505 aa12.98□□□□□ -0.33
LMNA-218ENST00000502357 NNMTP40261 264 aa12.98□□□□□ -0.33
LMNA-218ENST00000502357 YWHAZP63104 245 aaKnown RBP12.98□□□□□ -0.33
LMNA-218ENST00000502357 FKBP3Q00688 224 aaKnown RBP12.98□□□□□ -0.33
LMNA-218ENST00000502357 KCNC4Q03721 635 aa12.98□□□□□ -0.33
LMNA-218ENST00000502357 AUHQ13825 339 aaKnown RBP12.98□□□□□ -0.33
LMNA-218ENST00000502357 C3orf38Q5JPI3 329 aa12.98□□□□□ -0.33
LMNA-218ENST00000502357 PERM1Q5SV97 790 aa12.98□□□□□ -0.33
LMNA-218ENST00000502357 OTUD1Q5VV17 481 aaPredicted RBP12.98□□□□□ -0.33
LMNA-218ENST00000502357 GUSBP11Q6P575 273 aa12.98□□□□□ -0.33
LMNA-218ENST00000502357 Q6ZSR6 202 aa12.98□□□□□ -0.33
LMNA-218ENST00000502357 DSG4Q86SJ6 1040 aa12.98□□□□□ -0.33
LMNA-218ENST00000502357 CCDC117Q8IWD4 279 aaPredicted RBP12.98□□□□□ -0.33
LMNA-218ENST00000502357 CHST14Q8NCH0 376 aa12.98□□□□□ -0.33
LMNA-218ENST00000502357 ZNF548Q8NEK5 533 aaPredicted RBP12.98□□□□□ -0.33
LMNA-218ENST00000502357 SPATA20Q8TB22 786 aa12.98□□□□□ -0.33
LMNA-218ENST00000502357 FAM149B1Q96BN6 582 aa12.98□□□□□ -0.33
LMNA-218ENST00000502357 CALN1Q9BXU9 219 aa12.98□□□□□ -0.33
LMNA-218ENST00000502357 POPDC2Q9HBU9 364 aa12.98□□□□□ -0.33
LMNA-218ENST00000502357 METTL14Q9HCE5 456 aaKnown RBP12.98□□□□□ -0.33
LMNA-218ENST00000502357 THSD1Q9NS62 852 aa12.98□□□□□ -0.33
LMNA-218ENST00000502357 GTF3C3Q9Y5Q9 886 aa12.98□□□□□ -0.33
LMNA-218ENST00000502357 HS3ST4Q9Y661 456 aa12.98□□□□□ -0.33
LMNA-218ENST00000502357 HS3ST3A1Q9Y663 406 aa12.98□□□□□ -0.33
LMNA-218ENST00000502357 AHCTF1Q8WYP5 2266 aa12.98□□□□□ -0.33
LMNA-218ENST00000502357 SCN8AQ9UQD0 1980 aa12.98□□□□□ -0.33
LMNA-218ENST00000502357 A0A1W2PQ27 194 aa12.97□□□□□ -0.33
LMNA-218ENST00000502357 A0A1W2PQ64 194 aa12.97□□□□□ -0.33
LMNA-218ENST00000502357 TERTO14746 1132 aaKnown RBP12.97□□□□□ -0.33
LMNA-218ENST00000502357 NOBOXO60393 691 aa12.97□□□□□ -0.33
LMNA-218ENST00000502357 SNAP91O60641 907 aa12.97□□□□□ -0.33
LMNA-218ENST00000502357 APOEP02649 317 aa12.97□□□□□ -0.33
LMNA-218ENST00000502357 ITGB6P18564 788 aa12.97□□□□□ -0.33
LMNA-218ENST00000502357 ACADSBP45954 432 aa12.97□□□□□ -0.33
LMNA-218ENST00000502357 GCNT1Q02742 428 aa12.97□□□□□ -0.33
LMNA-218ENST00000502357 DRAP1Q14919 205 aaPredicted RBP12.97□□□□□ -0.33
LMNA-218ENST00000502357 MEA1Q16626 185 aa12.97□□□□□ -0.33
LMNA-218ENST00000502357 TTC39BQ5VTQ0 682 aaPredicted RBP12.97□□□□□ -0.33
LMNA-218ENST00000502357 OR6B2Q6IFH4 312 aa12.97□□□□□ -0.33
LMNA-218ENST00000502357 RRAGAQ7L523 313 aa12.97□□□□□ -0.33
LMNA-218ENST00000502357 ATP6V0D2Q8N8Y2 350 aa12.97□□□□□ -0.33
LMNA-218ENST00000502357 MAPK15Q8TD08 544 aa12.97□□□□□ -0.33
LMNA-218ENST00000502357 HDAC8Q9BY41 377 aa12.97□□□□□ -0.33
LMNA-218ENST00000502357 ACP6Q9NPH0 428 aa12.97□□□□□ -0.33
LMNA-218ENST00000502357 ZNF212Q9UDV6 495 aa12.97□□□□□ -0.33
LMNA-218ENST00000502357 CSNK1G3Q9Y6M4 447 aa12.97□□□□□ -0.33
LMNA-218ENST00000502357 WASF2Q9Y6W5 498 aa12.97□□□□□ -0.33
LMNA-218ENST00000502357 DOCK4Q8N1I0 1966 aa12.97□□□□□ -0.33
LMNA-218ENST00000502357 SART1O43290 800 aaKnown RBP12.96□□□□□ -0.33
LMNA-218ENST00000502357 SLC28A2O43868 658 aa12.96□□□□□ -0.33
LMNA-218ENST00000502357 CNTN5O94779 1100 aa12.96□□□□□ -0.33
LMNA-218ENST00000502357 AKT2P31751 481 aa12.96□□□□□ -0.33
LMNA-218ENST00000502357 GGCXP38435 758 aa12.96□□□□□ -0.33
LMNA-218ENST00000502357 EIF2B5Q13144 721 aaKnown RBP12.96□□□□□ -0.33
LMNA-218ENST00000502357 PNOCQ13519 176 aa12.96□□□□□ -0.33
LMNA-218ENST00000502357 CDKN3Q16667 212 aa12.96□□□□□ -0.33
LMNA-218ENST00000502357 ACCSLQ4AC99 568 aa12.96□□□□□ -0.33
LMNA-218ENST00000502357 ALFQ53S48 1182 aa12.96□□□□□ -0.33
LMNA-218ENST00000502357 ZCCHC8Q6NZY4 707 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms