RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 RAB3IPQ96QF0 476 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 MYOCQ99972 504 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 SYT3Q9BQG1 590 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 NAA11Q9BSU3 229 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 SGPP1Q9BX95 441 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 KRT23Q9C075 422 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 PCED1AQ9H1Q7 454 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 SLC25A32Q9H2D1 315 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 ARHGEF3Q9NR81 526 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 GIMAP4Q9NUV9 329 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 FBXO34Q9NWN3 711 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 DDX43Q9NXZ2 648 aaKnown RBP4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 GPRC5DQ9NZD1 345 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 NINJ2Q9NZG7 142 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 KCND2Q9NZV8 630 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 ACTR3BQ9P1U1 418 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 ZNF624Q9P2J8 865 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 HOOK1Q9UJC3 728 aaKnown RBP4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 HPCAL4Q9UM19 191 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 PAPPAQ13219 1627 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 PARD3Q8TEW0 1356 aa4.52□□□□□ -1.69
HMGB1P21-201ENST00000502313 SBF2Q86WG5 1849 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 CGNL1Q0VF96 1302 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 MYOCOSA0A1B0GUC4 107 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 A0A1W2PRV1 198 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 SH2D7A6NKC9 451 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 ZNF263O14978 683 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 CCNT2O60583 730 aaKnown RBP4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 TOX4O94842 621 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 GNAI2P04899 355 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 JUNP05412 331 aaKnown RBP4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 URODP06132 367 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 PDHA1P08559 390 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 FDPSP14324 419 aaKnown RBP4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 YY1P25490 414 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 RPL13P26373 211 aaKnown RBP4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 AVPR2P30518 371 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 LMAN1P49257 510 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 MRPL12P52815 198 aaKnown RBP4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 STARD6P59095 220 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 BPIFB4P59827 614 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 UFM1P61960 85 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 RPL7AP62424 266 aaKnown RBP4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 RCN2Q14257 317 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 MORF4L2Q15014 288 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 PLA1AQ53H76 456 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 ZRANB3Q5FWF4 1079 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 NHSL2Q5HYW2 709 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 ARTNQ5T4W7 220 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 ABLIM2Q6H8Q1 611 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 NCEH1Q6PIU2 408 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 FAM111BQ6SJ93 734 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 CBLL1Q75N03 491 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 DEFB132Q7Z7B7 95 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 RALYLQ86SE5 291 aaKnown RBP4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 CLEC14AQ86T13 490 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 FAM124AQ86V42 546 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 IGDCC3Q8IVU1 814 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 CCDC105Q8IYK2 499 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 LILRA3Q8N6C8 439 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 FSIP1Q8NA03 581 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 CTCFLQ8NI51 663 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 SETD6Q8TBK2 473 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 PRPF31Q8WWY3 499 aaKnown RBP4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 ARHGEF2Q92974 986 aaKnown RBP4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 NKD2Q969F2 451 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 FAM162AQ96A26 154 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 SYAP1Q96A49 352 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 CNDP1Q96KN2 507 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 TTPALQ9BTX7 342 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 PACSIN1Q9BY11 444 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 C11orf54Q9H0W9 315 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 OR10A2Q9H208 303 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 UNKLQ9H9P5 680 aaKnown RBP4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 PAPOLBQ9NRJ5 636 aaKnown RBP4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 CHCHD3Q9NX63 227 aaKnown RBP4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 PPP1R14DQ9NXH3 145 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 EHD2Q9NZN4 543 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 MARCH4Q9P2E8 410 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 CTNNA3Q9UI47 895 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 EXOC7Q9UPT5 735 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 GDAQ9Y2T3 454 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 NEU2Q9Y3R4 380 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 ANGPTL3Q9Y5C1 460 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 PCDHGA5Q9Y5G8 931 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 PCDHGA1Q9Y5H4 931 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 FLT4P35916 1363 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 KIF20BQ96Q89 1820 aa4.51□□□□□ -1.69
HMGB1P21-201ENST00000502313 IGSF1Q8N6C5 1336 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 PKD1L3Q7Z443 1732 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 TCRBV7S2A1N4TA0A589 114 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 ZNF503-AS2A6NEH8 195 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 ZNF785A8K8V0 405 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 M0QYG6 137 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 PSMD14O00487 310 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 WDR46O15213 610 aaKnown RBP4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 BCAT2O15382 392 aaPredicted RBP4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 RIPK2O43353 540 aa4.5□□□□□ -1.69
HMGB1P21-201ENST00000502313 RRP9O43818 475 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms