RNA–Protein interactions for RNA: ENST00000499038.2

UBE2B-202, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 3

Gene UBE2B, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-202ENST00000499038 CDK18Q07002 472 aa4.45□□□□□ -1.7
UBE2B-202ENST00000499038 COASYQ13057 564 aa4.45□□□□□ -1.7
UBE2B-202ENST00000499038 KRTAP27-1Q3LI81 207 aa4.45□□□□□ -1.7
UBE2B-202ENST00000499038 GFI1BQ5VTD9 330 aa4.45□□□□□ -1.7
UBE2B-202ENST00000499038 C9orf57Q5W0N0 161 aa4.45□□□□□ -1.7
UBE2B-202ENST00000499038 NFRKBQ6P4R8 1299 aa4.45□□□□□ -1.7
UBE2B-202ENST00000499038 GGT6Q6P531 493 aa4.45□□□□□ -1.7
UBE2B-202ENST00000499038 H1FNTQ75WM6 255 aaPredicted RBP4.45□□□□□ -1.7
UBE2B-202ENST00000499038 RAB11FIP2Q7L804 512 aa4.45□□□□□ -1.7
UBE2B-202ENST00000499038 C16orf82Q7Z2V1 217 aa4.45□□□□□ -1.7
UBE2B-202ENST00000499038 RNF144BQ7Z419 303 aa4.45□□□□□ -1.7
UBE2B-202ENST00000499038 MIGA1Q8NAN2 632 aa4.45□□□□□ -1.7
UBE2B-202ENST00000499038 CPT1BQ92523 772 aa4.45□□□□□ -1.7
UBE2B-202ENST00000499038 NR4A3Q92570 626 aa4.45□□□□□ -1.7
UBE2B-202ENST00000499038 GFM1Q96RP9 751 aaKnown RBP4.45□□□□□ -1.7
UBE2B-202ENST00000499038 PIGSQ96S52 555 aa4.45□□□□□ -1.7
UBE2B-202ENST00000499038 ELAC1Q9H777 363 aaKnown RBP4.45□□□□□ -1.7
UBE2B-202ENST00000499038 IL36RNQ9UBH0 155 aa4.45□□□□□ -1.7
UBE2B-202ENST00000499038 BAG5Q9UL15 447 aa4.45□□□□□ -1.7
UBE2B-202ENST00000499038 LINC01565O15544 149 aa4.44□□□□□ -1.7
UBE2B-202ENST00000499038 LDB2O43679 373 aa4.44□□□□□ -1.7
UBE2B-202ENST00000499038 KCNJ13O60928 360 aa4.44□□□□□ -1.7
UBE2B-202ENST00000499038 ACTL6BO94805 426 aa4.44□□□□□ -1.7
UBE2B-202ENST00000499038 ITGA2BP08514 1039 aa4.44□□□□□ -1.7
UBE2B-202ENST00000499038 GNLYP22749 145 aa4.44□□□□□ -1.7
UBE2B-202ENST00000499038 PRKCHP24723 683 aa4.44□□□□□ -1.7
UBE2B-202ENST00000499038 RFC1P35251 1148 aaPredicted RBP4.44□□□□□ -1.7
UBE2B-202ENST00000499038 AMTP48728 403 aa4.44□□□□□ -1.7
UBE2B-202ENST00000499038 CLCNKBP51801 687 aa4.44□□□□□ -1.7
UBE2B-202ENST00000499038 ERVFC1-1P60608 527 aa4.44□□□□□ -1.7
UBE2B-202ENST00000499038 KIF5AQ12840 1032 aa4.44□□□□□ -1.7
UBE2B-202ENST00000499038 PTK2BQ14289 1009 aa4.44□□□□□ -1.7
UBE2B-202ENST00000499038 HNF4GQ14541 408 aa4.44□□□□□ -1.7
UBE2B-202ENST00000499038 ZNF284Q2VY69 593 aa4.44□□□□□ -1.7
UBE2B-202ENST00000499038 HSP90AB2PQ58FF8 381 aa4.44□□□□□ -1.7
UBE2B-202ENST00000499038 MTFR2Q6P444 385 aa4.44□□□□□ -1.7
UBE2B-202ENST00000499038 RINLQ6ZS11 566 aa4.44□□□□□ -1.7
UBE2B-202ENST00000499038 CLIP4Q8N3C7 705 aa4.44□□□□□ -1.7
UBE2B-202ENST00000499038 ZNF527Q8NB42 609 aa4.44□□□□□ -1.7
UBE2B-202ENST00000499038 SLC2A12Q8TD20 617 aa4.44□□□□□ -1.7
UBE2B-202ENST00000499038 FAM216AQ8WUB2 273 aa4.44□□□□□ -1.7
UBE2B-202ENST00000499038 FAR1Q8WVX9 515 aa4.44□□□□□ -1.7
UBE2B-202ENST00000499038 TMED6Q8WW62 240 aa4.44□□□□□ -1.7
UBE2B-202ENST00000499038 PPP1R10Q96QC0 940 aaKnown RBP4.44□□□□□ -1.7
UBE2B-202ENST00000499038 FRG2BQ96QU4 278 aa4.44□□□□□ -1.7
UBE2B-202ENST00000499038 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.44□□□□□ -1.7
UBE2B-202ENST00000499038 RETREG1Q9H6L5 497 aa4.44□□□□□ -1.7
UBE2B-202ENST00000499038 OBP2BQ9NPH6 170 aa4.44□□□□□ -1.7
UBE2B-202ENST00000499038 A0A1B0GUV1 79 aa4.43□□□□□ -1.7
UBE2B-202ENST00000499038 C17orf102A2RUQ5 167 aa4.43□□□□□ -1.7
UBE2B-202ENST00000499038 NPIPB13A6NJU9 1138 aa4.43□□□□□ -1.7
UBE2B-202ENST00000499038 NPIPB5A8MRT5 1133 aa4.43□□□□□ -1.7
UBE2B-202ENST00000499038 LGALS16A8MUM7 142 aa4.43□□□□□ -1.7
UBE2B-202ENST00000499038 NPIPB4C9JG80 1138 aa4.43□□□□□ -1.7
UBE2B-202ENST00000499038 EYA2O00167 538 aa4.43□□□□□ -1.7
UBE2B-202ENST00000499038 SYN3O14994 580 aa4.43□□□□□ -1.7
UBE2B-202ENST00000499038 CCNT1O60563 726 aaKnown RBP4.43□□□□□ -1.7
UBE2B-202ENST00000499038 PPP1R3DO95685 299 aa4.43□□□□□ -1.7
UBE2B-202ENST00000499038 FCGR2AP12318 317 aa4.43□□□□□ -1.7
UBE2B-202ENST00000499038 NAGAP17050 411 aa4.43□□□□□ -1.7
UBE2B-202ENST00000499038 ITGB8P26012 769 aa4.43□□□□□ -1.7
UBE2B-202ENST00000499038 CDK7P50613 346 aa4.43□□□□□ -1.7
UBE2B-202ENST00000499038 TMEM268Q5VZI3 342 aa4.43□□□□□ -1.7
UBE2B-202ENST00000499038 KLHL17Q6TDP4 642 aa4.43□□□□□ -1.7
UBE2B-202ENST00000499038 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.43□□□□□ -1.72e-6■■■■□ 19.7
UBE2B-202ENST00000499038 MON1BQ7L1V2 547 aa4.43□□□□□ -1.7
UBE2B-202ENST00000499038 ARMC9Q7Z3E5 817 aa4.43□□□□□ -1.7
UBE2B-202ENST00000499038 ZNF329Q86UD4 541 aa4.43□□□□□ -1.7
UBE2B-202ENST00000499038 OR1N1Q8NGS0 311 aa4.43□□□□□ -1.7
UBE2B-202ENST00000499038 ARRDC3Q96B67 414 aa4.43□□□□□ -1.7
UBE2B-202ENST00000499038 C3orf49Q96BT1 292 aa4.43□□□□□ -1.7
UBE2B-202ENST00000499038 KATNAL1Q9BW62 490 aa4.43□□□□□ -1.7
UBE2B-202ENST00000499038 C1QTNF4Q9BXJ3 329 aa4.43□□□□□ -1.7
UBE2B-202ENST00000499038 CADM1Q9BY67 442 aaKnown RBP4.43□□□□□ -1.7
UBE2B-202ENST00000499038 ZNF556Q9HAH1 456 aa4.43□□□□□ -1.7
UBE2B-202ENST00000499038 ARNT2Q9HBZ2 717 aa4.43□□□□□ -1.7
UBE2B-202ENST00000499038 NLRC4Q9NPP4 1024 aa4.43□□□□□ -1.7
UBE2B-202ENST00000499038 HERC5Q9UII4 1024 aaKnown RBP4.43□□□□□ -1.7
UBE2B-202ENST00000499038 C19orf53Q9UNZ5 99 aaPredicted RBP4.43□□□□□ -1.7
UBE2B-202ENST00000499038 HSPB6O14558 160 aa4.42□□□□□ -1.7
UBE2B-202ENST00000499038 RNMTO43148 476 aaKnown RBP4.42□□□□□ -1.7
UBE2B-202ENST00000499038 HNRNPRO43390 633 aaKnown RBP4.42□□□□□ -1.7
UBE2B-202ENST00000499038 GRID2O43424 1007 aa4.42□□□□□ -1.7
UBE2B-202ENST00000499038 PRC1O43663 620 aa4.42□□□□□ -1.7
UBE2B-202ENST00000499038 ITM2AO43736 263 aa4.42□□□□□ -1.7
UBE2B-202ENST00000499038 SERPINI2O75830 405 aa4.42□□□□□ -1.7
UBE2B-202ENST00000499038 MMP3P08254 477 aa4.42□□□□□ -1.7
UBE2B-202ENST00000499038 ENO3P13929 434 aaPredicted RBP4.42□□□□□ -1.7
UBE2B-202ENST00000499038 THPOP40225 353 aa4.42□□□□□ -1.7
UBE2B-202ENST00000499038 SLC39A14Q15043 492 aa4.42□□□□□ -1.7
UBE2B-202ENST00000499038 GALNTL6Q49A17 601 aa4.42□□□□□ -1.7
UBE2B-202ENST00000499038 SYTL3Q4VX76 610 aa4.42□□□□□ -1.7
UBE2B-202ENST00000499038 LCE1EQ5T753 118 aa4.42□□□□□ -1.7
UBE2B-202ENST00000499038 SYNE3Q6ZMZ3 975 aa4.42□□□□□ -1.7
UBE2B-202ENST00000499038 SERPINA11Q86U17 422 aa4.42□□□□□ -1.7
UBE2B-202ENST00000499038 SLC44A2Q8IWA5 706 aaPredicted RBP4.42□□□□□ -1.7
UBE2B-202ENST00000499038 CCDC117Q8IWD4 279 aaPredicted RBP4.42□□□□□ -1.7
UBE2B-202ENST00000499038 SCN4BQ8IWT1 228 aa4.42□□□□□ -1.7
UBE2B-202ENST00000499038 WFIKKN2Q8TEU8 576 aa4.42□□□□□ -1.7
UBE2B-202ENST00000499038 EID2BQ96D98 161 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms