RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 KLC2Q9H0B6 622 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 RSPH9Q9H1X1 276 aaPredicted RBP17.12■□□□□ 0.33
PRKCB-210ENST00000498739 LRRC19Q9H756 370 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 RCOR3Q9P2K3 495 aaPredicted RBP17.12■□□□□ 0.33
PRKCB-210ENST00000498739 RAB23Q9ULC3 237 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 SMG5Q9UPR3 1016 aaKnown RBP17.12■□□□□ 0.33
PRKCB-210ENST00000498739 MFHAS1Q9Y4C4 1052 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 ALG6Q9Y672 507 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 DUSP10Q9Y6W6 482 aa17.12■□□□□ 0.33
PRKCB-210ENST00000498739 ARHGAP42A6NI28 874 aa17.11■□□□□ 0.33
PRKCB-210ENST00000498739 BTNL10A8MVZ5 291 aa17.11■□□□□ 0.33
PRKCB-210ENST00000498739 DFFAO00273 331 aa17.11■□□□□ 0.33
PRKCB-210ENST00000498739 ARHGAP6O43182 974 aa17.11■□□□□ 0.33
PRKCB-210ENST00000498739 LMNAP02545 664 aaKnown RBP17.11■□□□□ 0.33
PRKCB-210ENST00000498739 DNTTP04053 509 aa17.11■□□□□ 0.33
PRKCB-210ENST00000498739 BCKDHBP21953 392 aa17.11■□□□□ 0.33
PRKCB-210ENST00000498739 PLA2G5P39877 138 aa17.11■□□□□ 0.33
PRKCB-210ENST00000498739 PAPOLAP51003 745 aaKnown RBP17.11■□□□□ 0.33
PRKCB-210ENST00000498739 GEMIN4P57678 1058 aaKnown RBP17.11■□□□□ 0.33
PRKCB-210ENST00000498739 RPS14P62263 151 aaKnown RBP17.11■□□□□ 0.33
PRKCB-210ENST00000498739 KIF5AQ12840 1032 aa17.11■□□□□ 0.33
PRKCB-210ENST00000498739 SERINC3Q13530 473 aa17.11■□□□□ 0.33
PRKCB-210ENST00000498739 ELAVL3Q14576 367 aaKnown RBP17.11■□□□□ 0.33
PRKCB-210ENST00000498739 MAP7D1Q3KQU3 841 aa17.11■□□□□ 0.33
PRKCB-210ENST00000498739 C11orf63Q6NUN7 778 aa17.11■□□□□ 0.33
PRKCB-210ENST00000498739 DAAM2Q86T65 1068 aa17.11■□□□□ 0.33
PRKCB-210ENST00000498739 LZTR1Q8N653 840 aa17.11■□□□□ 0.33
PRKCB-210ENST00000498739 TPCN2Q8NHX9 752 aa17.11■□□□□ 0.33
PRKCB-210ENST00000498739 OR8D1Q8WZ84 308 aa17.11■□□□□ 0.33
PRKCB-210ENST00000498739 ANP32BQ92688 251 aaKnown RBP17.11■□□□□ 0.33
PRKCB-210ENST00000498739 ZNF670Q9BS34 389 aa17.11■□□□□ 0.33
PRKCB-210ENST00000498739 TNKS2Q9H2K2 1166 aa17.11■□□□□ 0.33
PRKCB-210ENST00000498739 ETNK2Q9NVF9 386 aa17.11■□□□□ 0.33
PRKCB-210ENST00000498739 FCF1Q9Y324 198 aaKnown RBP17.11■□□□□ 0.33
PRKCB-210ENST00000498739 CKAP5Q14008 2032 aa17.11■□□□□ 0.33
PRKCB-210ENST00000498739 MUC6Q6W4X9 2439 aa17.1■□□□□ 0.33
PRKCB-210ENST00000498739 MYO18AQ92614 2054 aaKnown RBP17.1■□□□□ 0.33
PRKCB-210ENST00000498739 IGHV1OR15-9A0A0B4J2B8 117 aa17.1■□□□□ 0.33
PRKCB-210ENST00000498739 A0A0U1RQJ8 604 aa17.1■□□□□ 0.33
PRKCB-210ENST00000498739 CXorf51AA0A1B0GTR3 108 aa17.1■□□□□ 0.33
PRKCB-210ENST00000498739 LRRD1A4D1F6 860 aa17.1■□□□□ 0.33
PRKCB-210ENST00000498739 ZSCAN5CA6NGD5 496 aaPredicted RBP17.1■□□□□ 0.33
PRKCB-210ENST00000498739 MAP3K13O43283 966 aa17.1■□□□□ 0.33
PRKCB-210ENST00000498739 NRDCO43847 1150 aa17.1■□□□□ 0.33
PRKCB-210ENST00000498739 CD160O95971 181 aa17.1■□□□□ 0.33
PRKCB-210ENST00000498739 KRT1P04264 644 aa17.1■□□□□ 0.33
PRKCB-210ENST00000498739 KDELR1P24390 212 aa17.1■□□□□ 0.33
PRKCB-210ENST00000498739 IL4RP24394 825 aa17.1■□□□□ 0.33
PRKCB-210ENST00000498739 PSMD8P48556 350 aa17.1■□□□□ 0.33
PRKCB-210ENST00000498739 ODF2Q5BJF6 829 aa17.1■□□□□ 0.33
PRKCB-210ENST00000498739 ANKRD20A8PQ5CZ79 823 aa17.1■□□□□ 0.33
PRKCB-210ENST00000498739 LRRC38Q5VT99 294 aa17.1■□□□□ 0.33
PRKCB-210ENST00000498739 METTL3Q86U44 580 aaKnown RBP17.1■□□□□ 0.33
PRKCB-210ENST00000498739 KBTBD6Q86V97 674 aa17.1■□□□□ 0.33
PRKCB-210ENST00000498739 C11orf74Q86VG3 221 aa17.1■□□□□ 0.33
PRKCB-210ENST00000498739 MMAAQ8IVH4 418 aaKnown RBP17.1■□□□□ 0.33
PRKCB-210ENST00000498739 ARHGAP12Q8IWW6 846 aa17.1■□□□□ 0.33
PRKCB-210ENST00000498739 SUMF1Q8NBK3 374 aa17.1■□□□□ 0.33
PRKCB-210ENST00000498739 RAPGEF5Q92565 580 aa17.1■□□□□ 0.33
PRKCB-210ENST00000498739 CALR3Q96L12 384 aaKnown RBP17.1■□□□□ 0.33
PRKCB-210ENST00000498739 CCDC114Q96M63 670 aa17.1■□□□□ 0.33
PRKCB-210ENST00000498739 FAM129BQ96TA1 746 aa17.1■□□□□ 0.33
PRKCB-210ENST00000498739 CEP44Q9C0F1 390 aa17.1■□□□□ 0.33
PRKCB-210ENST00000498739 ITM2CQ9NQX7 267 aa17.1■□□□□ 0.33
PRKCB-210ENST00000498739 USP36Q9P275 1121 aaKnown RBP17.1■□□□□ 0.33
PRKCB-210ENST00000498739 FANCMQ8IYD8 2048 aa17.09■□□□□ 0.33
PRKCB-210ENST00000498739 MACROD2A1Z1Q3 448 aa17.09■□□□□ 0.33
PRKCB-210ENST00000498739 IL1BP01584 269 aa17.09■□□□□ 0.33
PRKCB-210ENST00000498739 SERPINB6P35237 376 aa17.09■□□□□ 0.33
PRKCB-210ENST00000498739 RECQLP46063 649 aaPredicted RBP17.09■□□□□ 0.33
PRKCB-210ENST00000498739 DNA2P51530 1060 aa17.09■□□□□ 0.33
PRKCB-210ENST00000498739 TPMTP51580 245 aa17.09■□□□□ 0.33
PRKCB-210ENST00000498739 ZBTB16Q05516 673 aa17.09■□□□□ 0.33
PRKCB-210ENST00000498739 ELF2Q15723 593 aa17.09■□□□□ 0.33
PRKCB-210ENST00000498739 CST6Q15828 149 aa17.09■□□□□ 0.33
PRKCB-210ENST00000498739 PLK5Q496M5 336 aa17.09■□□□□ 0.33
PRKCB-210ENST00000498739 TTC31Q49AM3 519 aaPredicted RBP17.09■□□□□ 0.33
PRKCB-210ENST00000498739 AFMIDQ63HM1 303 aa17.09■□□□□ 0.33
PRKCB-210ENST00000498739 ASCL5Q7RTU5 278 aa17.09■□□□□ 0.33
PRKCB-210ENST00000498739 TP53INP2Q8IXH6 220 aa17.09■□□□□ 0.33
PRKCB-210ENST00000498739 PCDH19Q8TAB3 1148 aa17.09■□□□□ 0.33
PRKCB-210ENST00000498739 DUSP15Q9H1R2 295 aaPredicted RBP17.09■□□□□ 0.33
PRKCB-210ENST00000498739 SP110Q9HB58 689 aa17.09■□□□□ 0.33
PRKCB-210ENST00000498739 DDX56Q9NY93 547 aaKnown RBP17.09■□□□□ 0.33
PRKCB-210ENST00000498739 TRIM10Q9UDY6 481 aa17.09■□□□□ 0.33
PRKCB-210ENST00000498739 MBD1Q9UIS9 605 aaPredicted RBP17.09■□□□□ 0.33
PRKCB-210ENST00000498739 FARP1Q9Y4F1 1045 aaPredicted RBP17.09■□□□□ 0.33
PRKCB-210ENST00000498739 ADGRG1Q9Y653 693 aa17.09■□□□□ 0.33
PRKCB-210ENST00000498739 EML5Q05BV3 1969 aa17.08■□□□□ 0.33
PRKCB-210ENST00000498739 PRR23AA6NEV1 266 aa17.08■□□□□ 0.32
PRKCB-210ENST00000498739 J3KR12 359 aa17.08■□□□□ 0.32
PRKCB-210ENST00000498739 MCF2LO15068 1137 aa17.08■□□□□ 0.32
PRKCB-210ENST00000498739 ALOX15BO15296 676 aa17.08■□□□□ 0.32
PRKCB-210ENST00000498739 MID1O15344 667 aa17.08■□□□□ 0.32
PRKCB-210ENST00000498739 PSTPIP1O43586 416 aa17.08■□□□□ 0.32
PRKCB-210ENST00000498739 RHOBTB1O94844 696 aa17.08■□□□□ 0.32
PRKCB-210ENST00000498739 CCZ1BP86790 482 aa17.08■□□□□ 0.32
PRKCB-210ENST00000498739 CCZ1P86791 482 aaPredicted RBP17.08■□□□□ 0.32
PRKCB-210ENST00000498739 IFI16Q16666 785 aaKnown RBP17.08■□□□□ 0.32
PRKCB-210ENST00000498739 NCBP2-AS2Q69YL0 99 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms