RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 RWDD3Q9Y3V2 267 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 UBIAD1Q9Y5Z9 338 aa5.9□□□□□ -1.47
SOX2-OT-218ENST00000498731 NRXN2Q9P2S2 1712 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 A0A0G2JMP0 313 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 EXOC1LA0A1B0GW35 172 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 A8MV72 311 aaPredicted RBP5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 BTNL10A8MVZ5 291 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 TRIM77I1YAP6 450 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 TNFAIP8O95379 198 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 FAM58BPP0C7Q3 252 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 ZNF23P17027 643 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 BTF3P20290 206 aaKnown RBP5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 COMTP21964 271 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 STAT1P42224 750 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 DLG4P78352 724 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 MESDQ14696 234 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 OXA1LQ15070 435 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 MAPK11Q15759 364 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 USP41Q3LFD5 358 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 BORAQ6PGQ7 559 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 DPP9Q86TI2 863 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 VSIG10LQ86VR7 867 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 CBWD2Q8IUF1 395 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 TRIM59Q8IWR1 403 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 AHI1Q8N157 1196 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 TTC13Q8NBP0 860 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 CRYGNQ8WXF5 182 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 SLC7A3Q8WY07 619 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 SGCDQ92629 289 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 BORCS5Q969J3 196 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 ITPKCQ96DU7 683 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 THAP11Q96EK4 314 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 FAM111AQ96PZ2 611 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 CSF3RQ99062 836 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 WDR83Q9BRX9 315 aaKnown RBP5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 PI4K2AQ9BTU6 479 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 CFHR5Q9BXR6 569 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 RHOBTB2Q9BYZ6 727 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 POLR3FQ9H1D9 316 aaPredicted RBP5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 ZNF302Q9NR11 478 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 TOPORSQ9NS56 1045 aaPredicted RBP5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 FETUBQ9UGM5 382 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 DGKBQ9Y6T7 804 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 SZT2Q5T011 3432 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 ASTN1O14525 1302 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 LRRC37AA6NMS7 1700 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 STX16-NPEPL1H3BU86 382 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 INO80B-WBP1J3KQ70 363 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 PDHXO00330 501 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 AURKAO14965 403 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 TGFB1I1O43294 461 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 FAM155BO75949 473 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 RAC2P15153 192 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 SPNP16150 400 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 NAGAP17050 411 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 POLR2BP30876 1174 aaKnown RBP5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 GJC1P36383 396 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 POLR2IP36954 125 aaKnown RBP5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 HPCAL1P37235 193 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 OPRL1P41146 370 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 JAK3P52333 1124 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 ARPP19P56211 112 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 CHRNEQ04844 493 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 TRAF2Q12933 501 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 PDIA2Q13087 525 aaKnown RBP5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 SLC13A2Q13183 592 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 MLC1Q15049 377 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 PRKD1Q15139 912 aaPredicted RBP5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 TRIM16LQ309B1 348 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 EML3Q32P44 896 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 LRIT3Q3SXY7 679 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 Q5BKY6 102 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 C10orf76Q5T2E6 689 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 ATAD3BQ5T9A4 648 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 VWA5B1Q5TIE3 1220 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 ERO1BQ86YB8 467 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 ARID3BQ8IVW6 561 aaPredicted RBP5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 CARNMT1Q8N4J0 409 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 FIG4Q92562 907 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 CIB1Q99828 191 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 HEMGNQ9BXL5 484 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 NARFLQ9H6Q4 476 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 NOL6Q9H6R4 1146 aaKnown RBP5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 FANCFQ9NPI8 374 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 ZMAT5Q9UDW3 170 aaKnown RBP5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 IFT52Q9Y366 437 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 HCN4Q9Y3Q4 1203 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 NR2E3Q9Y5X4 410 aa5.89□□□□□ -1.47
SOX2-OT-218ENST00000498731 K7ERI5 159 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 NRP1O14786 923 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 PRPF4O43172 522 aaKnown RBP eCLIP5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 MSI1O43347 362 aaKnown RBP5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 USP12O75317 370 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 TNFRSF21O75509 655 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 CIB2O75838 187 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 CD4P01730 458 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 CBLP22681 906 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 HMOX2P30519 316 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 MS4A2Q01362 244 aa5.88□□□□□ -1.47
SOX2-OT-218ENST00000498731 DRAP1Q14919 205 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms