RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 CDRT15L2A8MXV6 281 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 RNF225M0QZC1 329 aaPredicted RBP9.36□□□□□ -0.91
CCDC171-209ENST00000498725 RNF103O00237 685 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 TERTO14746 1132 aaKnown RBP9.36□□□□□ -0.91
CCDC171-209ENST00000498725 MCF2LO15068 1137 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 EFSO43281 561 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 AQP9O43315 295 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 STX10O60499 249 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 ENDOD1O94919 500 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 CTSLP07711 333 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 EPB41P11171 864 aaKnown RBP9.36□□□□□ -0.91
CCDC171-209ENST00000498725 PFKFB1P16118 471 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 GGCXP38435 758 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 IRAK1P51617 712 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 PITX1P78337 314 aaPredicted RBP9.36□□□□□ -0.91
CCDC171-209ENST00000498725 SULT2A1Q06520 285 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 C1orf61Q13536 156 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 SLC12A1Q13621 1099 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 FZD2Q14332 565 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 TCEA2Q15560 299 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 ARL13BQ3SXY8 428 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 ZCCHC8Q6NZY4 707 aaKnown RBP9.36□□□□□ -0.91
CCDC171-209ENST00000498725 LCLAT1Q6UWP7 414 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 ATG14Q6ZNE5 492 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 SMYD4Q8IYR2 804 aaPredicted RBP9.36□□□□□ -0.91
CCDC171-209ENST00000498725 ATP6V0D2Q8N8Y2 350 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 OR52K2Q8NGK3 314 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 WDR36Q8NI36 951 aaKnown RBP9.36□□□□□ -0.91
CCDC171-209ENST00000498725 GRIN3AQ8TCU5 1115 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 SPOCK2Q92563 424 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 ERCC4Q92889 916 aaPredicted RBP9.36□□□□□ -0.91
CCDC171-209ENST00000498725 FAM131CQ96AQ9 280 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 SLC39A13Q96H72 371 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 BTN2A3PQ96KV6 586 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 ZSWIM1Q9BR11 485 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 DUSP23Q9BVJ7 150 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 EPB41L5Q9HCM4 733 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 VPS28Q9UK41 221 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 BOLA1Q9Y3E2 137 aa9.36□□□□□ -0.91
CCDC171-209ENST00000498725 CCDC187A0A096LP49 1063 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 TCAF2A6NFQ2 919 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 H3BM21 787 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 K7ERQ8 282 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 RAD51BO15315 384 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 ATP9BO43861 1147 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 FBXO21O94952 628 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 GJB6O95452 261 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 PAK4O96013 591 aaPredicted RBP9.35□□□□□ -0.91
CCDC171-209ENST00000498725 HGFP14210 728 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 JUNDP17535 347 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 RRM1P23921 792 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 SLC5A2P31639 672 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 CHRNA3P32297 505 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 SKOR1P84550 965 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 NR0B2Q15466 257 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 NFIL3Q16649 462 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 RABGAP1LQ5R372 815 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 CXorf57Q6NSI4 855 aaKnown RBP9.35□□□□□ -0.91
CCDC171-209ENST00000498725 VASH2Q86V25 355 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 RBFAQ8N0V3 343 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 SH2D3CQ8N5H7 860 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 UBR7Q8N806 425 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 ATP11CQ8NB49 1132 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 CHST14Q8NCH0 376 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 KAT5Q92993 513 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 FAXDC2Q96IV6 333 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 PPP1R13BQ96KQ4 1090 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 BMFQ96LC9 184 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 RPRD1AQ96P16 312 aaPredicted RBP9.35□□□□□ -0.91
CCDC171-209ENST00000498725 IL12RB2Q99665 862 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 FEM1AQ9BSK4 669 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 MUC3BQ9H195 1237 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 TNKS2Q9H2K2 1166 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 FAM204AQ9H8W3 233 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 USP29Q9HBJ7 922 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 KLF15Q9UIH9 416 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 KIAA1257Q9ULG3 409 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 VANGL2Q9ULK5 521 aa9.35□□□□□ -0.91
CCDC171-209ENST00000498725 CHD5Q8TDI0 1954 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 KCNU1A8MYU2 1149 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 CETN3O15182 167 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 ALOX15BO15296 676 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 SNAP91O60641 907 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 RHOBTB3O94955 611 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 TRUB2O95900 331 aaKnown RBP9.34□□□□□ -0.91
CCDC171-209ENST00000498725 MT-CO1P00395 513 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 SRCP12931 536 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 ADKP55263 362 aaKnown RBP9.34□□□□□ -0.91
CCDC171-209ENST00000498725 CYP4F2P78329 520 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 DNM1Q05193 864 aaKnown RBP9.34□□□□□ -0.91
CCDC171-209ENST00000498725 PDE1CQ14123 709 aaPredicted RBP9.34□□□□□ -0.91
CCDC171-209ENST00000498725 SPIDRQ14159 915 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 CNGA2Q16280 664 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 ARSIQ5FYB1 569 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 TPRG1LQ5T0D9 272 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 FBXL22Q6P050 247 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 IGF2-ASQ6U949 168 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 LINGO4Q6UY18 593 aa9.34□□□□□ -0.91
CCDC171-209ENST00000498725 ZNF574Q6ZN55 896 aaPredicted RBP9.34□□□□□ -0.91
CCDC171-209ENST00000498725 ABI3BPQ7Z7G0 1075 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms