RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 TK1P04183 234 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 FGF2P09038 288 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 CYP4B1P13584 511 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 ACP5P13686 325 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 TNFRSF1BP20333 461 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 SCP2P22307 547 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 TBXAS1P24557 533 aaPredicted RBP3.14□□□□□ -1.91
RIF1-212ENST00000498041 SLC16A2P36021 539 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 PNPLA4P41247 253 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 HALP42357 657 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 CYP2J2P51589 502 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 RPS6KA3P51812 740 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 ACTR2P61160 394 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 THOC5Q13769 683 aaKnown RBP3.14□□□□□ -1.91
RIF1-212ENST00000498041 TAF5Q15542 800 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 PRTGQ2VWP7 1150 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 GXYLT1Q4G148 440 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 ENTPD8Q5MY95 495 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 ANKRD45Q5TZF3 282 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 HMBOX1Q6NT76 420 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 AAGABQ6PD74 315 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 KDELC2Q7Z4H8 507 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 GALNT7Q86SF2 657 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 SCN4BQ8IWT1 228 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 FTSJ3Q8IY81 847 aaKnown RBP3.14□□□□□ -1.91
RIF1-212ENST00000498041 FAM185AQ8N0U4 392 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 TMEM217Q8N7C4 229 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 NSMCE1Q8WV22 266 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 TRIM63Q969Q1 353 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 ZBTB9Q96C00 473 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 ISCA1Q9BUE6 129 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.14□□□□□ -1.91
RIF1-212ENST00000498041 FRMD8Q9BZ67 464 aaPredicted RBP3.14□□□□□ -1.91
RIF1-212ENST00000498041 ZNF304Q9HCX3 659 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 Q9N2J8 555 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 RNF146Q9NTX7 359 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 THAP1Q9NVV9 213 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 DERAQ9Y315 318 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 SQORQ9Y6N5 450 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 HECW1Q76N89 1606 aa3.14□□□□□ -1.91
RIF1-212ENST00000498041 FMN1Q68DA7 1419 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 FAM90A10PA6NDY2 464 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 GAGE12JA6NER3 117 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 B4DGG1 531 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 B9A039 149 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 SYN3O14994 580 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 IFNA2P01563 188 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 CRYABP02511 175 aaKnown RBP3.13□□□□□ -1.91
RIF1-212ENST00000498041 CSF1P09603 554 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 LYL1P12980 280 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 TNNT1P13805 278 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 KLRC2P26717 231 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 TYK2P29597 1187 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 AVPR2P30518 371 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 POLD2P49005 469 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 POLGP54098 1239 aaPredicted RBP3.13□□□□□ -1.91
RIF1-212ENST00000498041 PTGR1Q14914 329 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 C5orf22Q49AR2 442 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 CCDC184Q52MB2 194 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 RUNDC3AQ59EK9 446 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 ZNF484Q5JVG2 852 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 ASPHD1Q5U4P2 390 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 FAM171A1Q5VUB5 890 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 AADACL2Q6P093 401 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 RNF144BQ7Z419 303 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 TECPR1Q7Z6L1 1165 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 CCDC25Q86WR0 208 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 TMEM199Q8N511 208 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 TMEM57Q8N5G2 664 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 SLC25A41Q8N5S1 370 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 C2CD4CQ8TF44 421 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 LPAR1Q92633 364 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 ZNF419Q96HQ0 510 aaPredicted RBP3.13□□□□□ -1.91
RIF1-212ENST00000498041 CADM1Q9BY67 442 aaKnown RBP3.13□□□□□ -1.91
RIF1-212ENST00000498041 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.13□□□□□ -1.91
RIF1-212ENST00000498041 FAM234AQ9H0X4 552 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 HIPK3Q9H422 1215 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 RMI1Q9H9A7 625 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 ACTR5Q9H9F9 607 aaPredicted RBP3.13□□□□□ -1.91
RIF1-212ENST00000498041 PPCSQ9HAB8 311 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 ITM2CQ9NQX7 267 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 CFDP1Q9UEE9 299 aaPredicted RBP3.13□□□□□ -1.91
RIF1-212ENST00000498041 FEM1BQ9UK73 627 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 SLC4A4Q9Y6R1 1079 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 CAMSAP2Q08AD1 1489 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 KDM5BQ9UGL1 1544 aa3.13□□□□□ -1.91
RIF1-212ENST00000498041 CKAP5Q14008 2032 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 DAPK1P53355 1430 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 TROQ12816 1431 aaPredicted RBP3.12□□□□□ -1.91
RIF1-212ENST00000498041 MBD5Q9P267 1494 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 TRBV5-7A0A0A0MS05 114 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 CD8B2A6NJW9 211 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 SAC3D1A6NKF1 404 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 MDM4O15151 490 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 PIP5K1CO60331 668 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 OAZ2O95190 189 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 METTL18O95568 372 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 TOMM40O96008 361 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 KLKB1P03952 638 aa3.12□□□□□ -1.91
RIF1-212ENST00000498041 FCGR2AP12318 317 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms