RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 PIMREGQ9BSJ6 248 aa3.56□□□□□ -1.84
PSPC1-205ENST00000497722 ABHD16BQ9H3Z7 469 aa3.56□□□□□ -1.84
PSPC1-205ENST00000497722 AGO2Q9UKV8 859 aaKnown RBP3.56□□□□□ -1.84
PSPC1-205ENST00000497722 LAMP3Q9UQV4 416 aa3.56□□□□□ -1.84
PSPC1-205ENST00000497722 RCE1Q9Y256 329 aa3.56□□□□□ -1.84
PSPC1-205ENST00000497722 DNAJC16Q9Y2G8 782 aa3.56□□□□□ -1.84
PSPC1-205ENST00000497722 PKP3Q9Y446 797 aa3.56□□□□□ -1.84
PSPC1-205ENST00000497722 A0A1W2PPC1 479 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 NPIPB13A6NJU9 1138 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 NPIPB5A8MRT5 1133 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 NPIPB4C9JG80 1138 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 METTL18O95568 372 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 IL1AP01583 271 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 WNT1P04628 370 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 POLBP06746 335 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 CYP21A2P08686 494 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 HOXB2P14652 356 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 BYSLQ13895 437 aaKnown RBP3.55□□□□□ -1.84
PSPC1-205ENST00000497722 NAA25Q14CX7 972 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 NFIL3Q16649 462 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 AP5B1Q2VPB7 878 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 TMEM95Q3KNT9 176 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 ODF3L2Q3SX64 289 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 CBWD5Q5RIA9 395 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 MANEAQ5SRI9 462 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 C6orf10Q5SRN2 563 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 ATG16L1Q676U5 607 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 TRAPPC11Q7Z392 1133 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 MDGA2Q7Z553 956 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 GALNT7Q86SF2 657 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 LRRTM4Q86VH4 590 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 CERS3Q8IU89 383 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 BRSK2Q8IWQ3 736 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 SCN4BQ8IWT1 228 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 DDIASQ8IXT1 998 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 EXD3Q8N9H8 876 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 DNAAF1Q8NEP3 725 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 FAM110DQ8TAY7 271 aaPredicted RBP3.55□□□□□ -1.84
PSPC1-205ENST00000497722 ATP2A3Q93084 1043 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 SH3KBP1Q96B97 665 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 CTDSP1Q9GZU7 261 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 RASSF1Q9NS23 344 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 DECR2Q9NUI1 292 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 COG5Q9UP83 839 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 DTX4Q9Y2E6 619 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 RAP2CQ9Y3L5 183 aa3.55□□□□□ -1.84
PSPC1-205ENST00000497722 KIR2DS5A0A0G2JLQ3 304 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 CCDC189A1A4V9 331 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 PRR23D1E9PI22 279 aaPredicted RBP3.54□□□□□ -1.84
PSPC1-205ENST00000497722 KIR2DS3K7RE56 304 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 SPTLC2O15270 562 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 KIF1CO43896 1103 aaKnown RBP3.54□□□□□ -1.84
PSPC1-205ENST00000497722 GUCY1B2O75343 617 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 NDUFB8O95169 186 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 LCKP06239 509 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 PRR23D2P0DMB1 279 aaPredicted RBP3.54□□□□□ -1.84
PSPC1-205ENST00000497722 FCGR2AP12318 317 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 TYK2P29597 1187 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 TMPRSS3P57727 454 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 TBL3Q12788 808 aaKnown RBP3.54□□□□□ -1.84
PSPC1-205ENST00000497722 SEMA3AQ14563 771 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 IL13RA2Q14627 380 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 PGM5Q15124 567 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 KIAA1161Q6NSJ0 714 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 AADACL2Q6P093 401 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 DENND1BQ6P3S1 775 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 ZNF549Q6P9A3 640 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 AAGABQ6PD74 315 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 SLC22A25Q6T423 547 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 CYP26C1Q6V0L0 522 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 ADGRG6Q86SQ4 1221 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 PALB2Q86YC2 1186 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 TMEM199Q8N511 208 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 TMEM217Q8N7C4 229 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 RBMXL3Q8N7X1 1067 aaKnown RBP3.54□□□□□ -1.84
PSPC1-205ENST00000497722 SLC25A28Q96A46 364 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 CLMNQ96JQ2 1002 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 MAELQ96JY0 434 aaKnown RBP3.54□□□□□ -1.84
PSPC1-205ENST00000497722 NLRP4Q96MN2 994 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 NAP1L4Q99733 375 aaKnown RBP3.54□□□□□ -1.84
PSPC1-205ENST00000497722 NPLQ9BXD5 320 aaPredicted RBP3.54□□□□□ -1.84
PSPC1-205ENST00000497722 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.54□□□□□ -1.84
PSPC1-205ENST00000497722 ARHGAP39Q9C0H5 1083 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 TWSG1Q9GZX9 223 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 STN1Q9H668 368 aaKnown RBP3.54□□□□□ -1.84
PSPC1-205ENST00000497722 ACTR5Q9H9F9 607 aaPredicted RBP3.54□□□□□ -1.84
PSPC1-205ENST00000497722 CDH22Q9UJ99 828 aa3.54□□□□□ -1.84
PSPC1-205ENST00000497722 TMEM272A0A1B0GTI8 110 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 CCDC196A0A1B0GTZ2 297 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 VWA3AA6NCI4 1184 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 FOXO6A8MYZ6 492 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 KCNJ18B7U540 433 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 PYGLP06737 847 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 CDC25AP30304 524 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 RFC1P35251 1148 aaPredicted RBP3.53□□□□□ -1.84
PSPC1-205ENST00000497722 SLC16A2P36021 539 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 PAFAH1B1P43034 410 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 POLD2P49005 469 aa3.53□□□□□ -1.84
PSPC1-205ENST00000497722 ALDH7A1P49419 539 aaKnown RBP3.53□□□□□ -1.84
PSPC1-205ENST00000497722 TDGQ13569 410 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms