RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 H2AFVQ71UI9 128 aa16.35■□□□□ 0.21
CTDSP1-214ENST00000497677 STK40Q8N2I9 435 aa16.35■□□□□ 0.21
CTDSP1-214ENST00000497677 SH2D3CQ8N5H7 860 aa16.35■□□□□ 0.21
CTDSP1-214ENST00000497677 DCAF4L2Q8NA75 395 aa16.35■□□□□ 0.21
CTDSP1-214ENST00000497677 CADM4Q8NFZ8 388 aa16.35■□□□□ 0.21
CTDSP1-214ENST00000497677 TRIM58Q8NG06 486 aa16.35■□□□□ 0.21
CTDSP1-214ENST00000497677 OR7D4Q8NG98 312 aa16.35■□□□□ 0.21
CTDSP1-214ENST00000497677 FNIP1Q8TF40 1166 aa16.35■□□□□ 0.21
CTDSP1-214ENST00000497677 UBE2Q2Q8WVN8 375 aa16.35■□□□□ 0.21
CTDSP1-214ENST00000497677 HSPA12BQ96MM6 686 aa16.35■□□□□ 0.21
CTDSP1-214ENST00000497677 C2orf49Q9BVC5 232 aaPredicted RBP16.35■□□□□ 0.21
CTDSP1-214ENST00000497677 TMEM248Q9NWD8 314 aa16.35■□□□□ 0.21
CTDSP1-214ENST00000497677 EVLQ9UI08 416 aaPredicted RBP16.35■□□□□ 0.21
CTDSP1-214ENST00000497677 SPTBN4Q9H254 2564 aa16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 A0A0A6YYK5 440 aaPredicted RBP16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 METTL12A8MUP2 240 aa16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 K7ERQ8 282 aa16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 MYBL1P10243 752 aa16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 SRCP12931 536 aa16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 PSMA2P25787 234 aa16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 ACSL1P33121 698 aa16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 HOXD12P35452 270 aa16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 GNA12Q03113 381 aa16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 ELAVL3Q14576 367 aaKnown RBP16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 PUM1Q14671 1186 aaKnown RBP eCLIP16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 CST6Q15828 149 aa16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 RWDD4Q6NW29 188 aaKnown RBP16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 CYP4V2Q6ZWL3 525 aaPredicted RBP16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 FAM124AQ86V42 546 aa16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 MMAAQ8IVH4 418 aaKnown RBP16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 C12orf50Q8NA57 414 aaPredicted RBP16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 NETO1Q8TDF5 533 aa16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 DNASE2BQ8WZ79 361 aa16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 FOXJ1Q92949 421 aa16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 ZNF653Q96CK0 615 aa16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 TBC1D31Q96DN5 1066 aa16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 ALS2CR12Q96Q35 445 aa16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 ACE2Q9BYF1 805 aaPredicted RBP16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 PABPC3Q9H361 631 aaKnown RBP16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 SERGEFQ9UGK8 458 aa16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 DNAI1Q9UI46 699 aa16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 SLC25A13Q9UJS0 675 aa16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 GUCA1BQ9UMX6 200 aa16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 SCML1Q9UN30 329 aa16.34■□□□□ 0.21
CTDSP1-214ENST00000497677 LNP1A1A4G5 178 aa16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 C10orf142B7Z368 130 aa16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 SLC30A4O14863 429 aa16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 KHNYNO15037 678 aaKnown RBP16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 MID1O15344 667 aa16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 SMAD6O43541 496 aaKnown RBP16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 CD160O95971 181 aa16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 DNTTP04053 509 aa16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 MAOBP27338 520 aa16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 SLC8A1P32418 973 aa16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 DPP6P42658 865 aa16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 MAPKAPK2P49137 400 aa16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 LIMK1P53667 647 aa16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 TERF1P54274 439 aa16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 AIF1P55008 147 aa16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 AASDHQ4L235 1098 aaPredicted RBP16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 ZNF569Q5MCW4 686 aa16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 SLC23A3Q6PIS1 610 aa16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 LINGO4Q6UY18 593 aa16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 USP30Q70CQ3 517 aa16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 ZNF592Q92610 1267 aa16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 ARHGEF2Q92974 986 aaKnown RBP16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 TRIM11Q96F44 468 aa16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 PEBP4Q96S96 227 aa16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 NEUROG2Q9H2A3 272 aa16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 NOL6Q9H6R4 1146 aaKnown RBP16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 ATXN2Q99700 1313 aaKnown RBP16.33■□□□□ 0.2
CTDSP1-214ENST00000497677 CTAGE9A4FU28 777 aa16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 WASH4PA8MWX3 477 aa16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 CDX4O14627 284 aaPredicted RBP16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 TM4SF5O14894 197 aa16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 MCF2LO15068 1137 aa16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 RNASEH1O60930 286 aaKnown RBP16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 ZNF821O75541 412 aaPredicted RBP16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 TMEM253P0C7T8 217 aa16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 SDHBP21912 280 aa16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 ACVRL1P37023 503 aa16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 METAP1P53582 386 aa16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 ARF5P84085 180 aa16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 CA9Q16790 459 aa16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 TTC31Q49AM3 519 aaPredicted RBP16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 ACCSLQ4AC99 568 aa16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 TRIM61Q5EBN2 209 aa16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 EFHC2Q5JST6 749 aa16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 Q6ZVU0 165 aa16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 AADATQ8N5Z0 425 aa16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 ATP11CQ8NB49 1132 aa16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 C1orf216Q8TAB5 229 aa16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 FAM131CQ96AQ9 280 aa16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 SPON2Q9BUD6 331 aa16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 LACRTQ9GZZ8 138 aa16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 BTBD1Q9H0C5 482 aa16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 THAP2Q9H0W7 228 aa16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 PCED1AQ9H1Q7 454 aa16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 C6orf106Q9H6K1 298 aaPredicted RBP16.32■□□□□ 0.2
CTDSP1-214ENST00000497677 CAPN10Q9HC96 672 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms