RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 EPHA3P29320 983 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 CASP3P42574 277 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 ITGA1P56199 1179 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 FOXL2P58012 376 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 SLC26A5P58743 744 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 CDK18Q07002 472 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 SEMA3BQ13214 749 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 IL11RAQ14626 422 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 GSTA3Q16772 222 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 GAGE13Q4V321 117 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 ADGRF1Q5T601 910 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 TAPT1Q6NXT6 567 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 TMEM108Q6UXF1 575 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 SERPINA13PQ6UXR4 307 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 SLC30A10Q6XR72 485 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 PRRT2Q7Z6L0 340 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-224ENST00000497488 DSG4Q86SJ6 1040 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 ALYREFQ86V81 257 aaKnown RBP6.33□□□□□ -1.4
BRCA1-224ENST00000497488 CMTM4Q8IZR5 234 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 HDDC3Q8N4P3 179 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 C11orf44Q8N8P7 122 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 MISP3Q96FF7 219 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 CCDC120Q96HB5 630 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 VPS39Q96JC1 886 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 TRIB1Q96RU8 372 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 REXO4Q9GZR2 422 aaKnown RBP6.33□□□□□ -1.4
BRCA1-224ENST00000497488 IKZF4Q9H2S9 585 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 GCM1Q9NP62 436 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 ANO10Q9NW15 660 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 COMMD8Q9NX08 183 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 RABL2AQ9UBK7 228 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-224ENST00000497488 CROTQ9UKG9 612 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 FAM184BQ9ULE4 1060 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 PCDHB2Q9Y5E7 798 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 EFCAB5A4FU69 1503 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 ATP10BO94823 1461 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 NUP153P49790 1475 aaKnown RBP6.33□□□□□ -1.4
BRCA1-224ENST00000497488 WDR7Q9Y4E6 1490 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 EIF3CLB5ME19 914 aaKnown RBP6.32□□□□□ -1.4
BRCA1-224ENST00000497488 SMPD2O60906 423 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 TADA2AO75478 443 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 SEC31AO94979 1220 aaKnown RBP6.32□□□□□ -1.4
BRCA1-224ENST00000497488 CYP2C8P10632 490 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 TYMPP19971 482 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 MC5RP33032 325 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 CHRNA4P43681 627 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 BMXP51813 675 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 ADAM8P78325 824 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 ARHGAP8P85298 464 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 TLE3Q04726 772 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 KIAA2012Q0VF49 1180 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 GRAPQ13588 217 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 BMT2Q1RMZ1 405 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 ALG11Q2TAA5 492 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 FAM171A1Q5VUB5 890 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 ZNF574Q6ZN55 896 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-224ENST00000497488 CD163Q86VB7 1156 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 SLC15A3Q8IY34 581 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 SYNE4Q8N205 404 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 METTL25Q8N6Q8 603 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 PI4KAP1Q8N8J0 262 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 ANKRD53Q8N9V6 530 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 SHCBP1Q8NEM2 672 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 INTS4Q96HW7 963 aaKnown RBP6.32□□□□□ -1.4
BRCA1-224ENST00000497488 PRAM1Q96QH2 718 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 PAFAH2Q99487 392 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 HEMGNQ9BXL5 484 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 KRT23Q9C075 422 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 SLC6A15Q9H2J7 730 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 ABCB8Q9NUT2 735 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 IL1RAPL1Q9NZN1 696 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 OGFRQ9NZT2 677 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 KLHL14Q9P2G3 628 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 PEMTQ9UBM1 199 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 IL19Q9UHD0 177 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 CPSF3Q9UKF6 684 aaKnown RBP6.32□□□□□ -1.4
BRCA1-224ENST00000497488 PIN4Q9Y237 131 aaKnown RBP6.32□□□□□ -1.4
BRCA1-224ENST00000497488 PCDHGA5Q9Y5G8 931 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 PCDHGA1Q9Y5H4 931 aa6.32□□□□□ -1.4
BRCA1-224ENST00000497488 PPRC1Q5VV67 1664 aaKnown RBP6.32□□□□□ -1.4
BRCA1-224ENST00000497488 GLI2P10070 1586 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 LOC100509620A0A075B734 347 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 RNF103-CHMP3A0A140T963 221 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 A0A1W2PRG0 241 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 RNF103O00237 685 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 TLR2O60603 784 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 TACC1O75410 805 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 SIX3O95343 332 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-224ENST00000497488 IPO7O95373 1038 aaKnown RBP6.31□□□□□ -1.4
BRCA1-224ENST00000497488 DDAH2O95865 285 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 FCER1AP12319 257 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 TRIM21P19474 475 aaKnown RBP6.31□□□□□ -1.4
BRCA1-224ENST00000497488 AGAP20933 346 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 PTPN3P26045 913 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 PPIFP30405 207 aaKnown RBP6.31□□□□□ -1.4
BRCA1-224ENST00000497488 MTNR1AP48039 350 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 CCR3P51677 355 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 ADCY7P51828 1080 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 CAPZA1P52907 286 aa6.31□□□□□ -1.4
BRCA1-224ENST00000497488 TIRAPP58753 221 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms