RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 DHDHQ9UQ10 334 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 LAS1LQ9Y4W2 734 aaKnown RBP4.36□□□□□ -1.71
SMC4-225ENST00000497203 ZNF804BA4D1E1 1349 aa4.36□□□□□ -1.71
SMC4-225ENST00000497203 KCNU1A8MYU2 1149 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 BCAR3O75815 825 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 PLAUP00749 431 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 CD63P08962 238 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 HSPA1AP0DMV8 641 aaKnown RBP4.35□□□□□ -1.71
SMC4-225ENST00000497203 HSPA1BP0DMV9 641 aaKnown RBP4.35□□□□□ -1.71
SMC4-225ENST00000497203 TYK2P29597 1187 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 GGT5P36269 586 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 SKIV2L2P42285 1042 aaKnown RBP4.35□□□□□ -1.71
SMC4-225ENST00000497203 MTNR1AP48039 350 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 ZNF81P51508 661 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 CCR9P51686 369 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 CLNS1AP54105 237 aaKnown RBP4.35□□□□□ -1.71
SMC4-225ENST00000497203 KRTAP10-11P60412 298 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 HSF1Q00613 529 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 SEMA3AQ14563 771 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 ZNF268Q14587 947 aaPredicted RBP4.35□□□□□ -1.71
SMC4-225ENST00000497203 IL13RA2Q14627 380 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 TSTQ16762 297 aaKnown RBP4.35□□□□□ -1.71
SMC4-225ENST00000497203 PRICKLE4Q2TBC4 344 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 AP5B1Q2VPB7 878 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 SH2D4BQ5SQS7 431 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 VWA5B1Q5TIE3 1220 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 MORN5Q5VZ52 161 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 H1FNTQ75WM6 255 aaPredicted RBP4.35□□□□□ -1.71
SMC4-225ENST00000497203 RRM2BQ7LG56 351 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 RNF144BQ7Z419 303 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 C1QL2Q7Z5L3 287 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 TFAP2DQ7Z6R9 452 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 RAB40AQ8WXH6 277 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 ELP4Q96EB1 424 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 EYA3Q99504 573 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.35□□□□□ -1.71
SMC4-225ENST00000497203 C1QTNF7Q9BXJ2 289 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 PRSS22Q9GZN4 317 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.35□□□□□ -1.71
SMC4-225ENST00000497203 NRIP3Q9NQ35 241 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 TBC1D22BQ9NU19 505 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 KCND2Q9NZV8 630 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 ORC3Q9UBD5 711 aaPredicted RBP4.35□□□□□ -1.71
SMC4-225ENST00000497203 FBXO40Q9UH90 709 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 CNPY2Q9Y2B0 182 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 BTBD3Q9Y2F9 522 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 SCINQ9Y6U3 715 aa4.35□□□□□ -1.71
SMC4-225ENST00000497203 TDRD9Q8NDG6 1382 aaKnown RBP4.35□□□□□ -1.71
SMC4-225ENST00000497203 CYP2D7A0A087X1C5 515 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 OR6C68A6NDL8 312 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 PER2O15055 1255 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 TP73O15350 636 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 KIF1CO43896 1103 aaKnown RBP4.34□□□□□ -1.71
SMC4-225ENST00000497203 LCKP06239 509 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 ST6GAL1P15907 406 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 ATP5F1P24539 256 aaPredicted RBP4.34□□□□□ -1.71
SMC4-225ENST00000497203 PSMA4P25789 261 aaKnown RBP4.34□□□□□ -1.71
SMC4-225ENST00000497203 CHRNA5P30532 468 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 DCAF7P61962 342 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 RHAGQ02094 409 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 PTP4A2Q12974 167 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 TDGQ13569 410 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 PDE1CQ14123 709 aaPredicted RBP4.34□□□□□ -1.71
SMC4-225ENST00000497203 GALNT3Q14435 633 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 PLK5Q496M5 336 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 C5orf22Q49AR2 442 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 ARL13AQ5H913 290 aaPredicted RBP4.34□□□□□ -1.71
SMC4-225ENST00000497203 MEX3CQ5U5Q3 659 aaKnown RBP4.34□□□□□ -1.71
SMC4-225ENST00000497203 FAM171A1Q5VUB5 890 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 CCDC30Q5VVM6 783 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 TMEM268Q5VZI3 342 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 LRIG3Q6UXM1 1119 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 ATF7IPQ6VMQ6 1270 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 MON1AQ86VX9 555 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 CHD1LQ86WJ1 897 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 GHDCQ8N2G8 530 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 OSR1Q8TAX0 266 aaPredicted RBP4.34□□□□□ -1.71
SMC4-225ENST00000497203 MAP4K1Q92918 833 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 KIF1BPQ96EK5 621 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 SAAL1Q96ER3 474 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 TIGD1Q96MW7 591 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 TEFMQ96QE5 360 aaKnown RBP4.34□□□□□ -1.71
SMC4-225ENST00000497203 FRG2BQ96QU4 278 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 IFT27Q9BW83 186 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 TM2D2Q9BX73 214 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 EPHX3Q9H6B9 360 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 MPP6Q9NZW5 540 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 UPB1Q9UBR1 384 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 CAMK2AQ9UQM7 478 aa4.34□□□□□ -1.71
SMC4-225ENST00000497203 ZNF335Q9H4Z2 1342 aaPredicted RBP4.33□□□□□ -1.72
SMC4-225ENST00000497203 C17orf113A0A1B0GUU1 675 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.33□□□□□ -1.72
SMC4-225ENST00000497203 ANKRD18BA2A2Z9 1011 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 DPPA5A6NC42 116 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 PGPEP1LA6NFU8 196 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 MSI1O43347 362 aaKnown RBP4.33□□□□□ -1.72
SMC4-225ENST00000497203 ZBED4O75132 1171 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 NFATC1O95644 943 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 FCGR2AP12318 317 aa4.33□□□□□ -1.72
SMC4-225ENST00000497203 COX7A2P14406 83 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms