RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 CREG2Q8IUH2 290 aa22.2■■□□□ 1.14
C9orf3-222ENST00000496567 ZNF687Q8N1G0 1237 aa22.2■■□□□ 1.14
C9orf3-222ENST00000496567 ZNF513Q8N8E2 541 aaPredicted RBP22.2■■□□□ 1.14
C9orf3-222ENST00000496567 CASKIN2Q8WXE0 1202 aa22.2■■□□□ 1.14
C9orf3-222ENST00000496567 FATE1Q969F0 183 aa22.2■■□□□ 1.14
C9orf3-222ENST00000496567 CAPZA3Q96KX2 299 aa22.2■■□□□ 1.14
C9orf3-222ENST00000496567 RPL10LQ96L21 214 aaKnown RBP22.2■■□□□ 1.14
C9orf3-222ENST00000496567 LGMNQ99538 433 aa22.2■■□□□ 1.14
C9orf3-222ENST00000496567 PDFQ9HBH1 243 aa22.2■■□□□ 1.14
C9orf3-222ENST00000496567 THAP10Q9P2Z0 257 aaPredicted RBP22.2■■□□□ 1.14
C9orf3-222ENST00000496567 UBA2Q9UBT2 640 aaPredicted RBP22.2■■□□□ 1.14
C9orf3-222ENST00000496567 SLC8A2Q9UPR5 921 aa22.2■■□□□ 1.14
C9orf3-222ENST00000496567 NCOR1O75376 2440 aa22.2■■□□□ 1.14
C9orf3-222ENST00000496567 H7C0C1 242 aa22.19■■□□□ 1.14
C9orf3-222ENST00000496567 ZNF189O75820 626 aaPredicted RBP22.19■■□□□ 1.14
C9orf3-222ENST00000496567 CHRNB1P11230 501 aa22.19■■□□□ 1.14
C9orf3-222ENST00000496567 ATP5OP48047 213 aa22.19■■□□□ 1.14
C9orf3-222ENST00000496567 SEC13P55735 322 aa22.19■■□□□ 1.14
C9orf3-222ENST00000496567 AP1B1Q10567 949 aa22.19■■□□□ 1.14
C9orf3-222ENST00000496567 RFTN1Q14699 578 aaPredicted RBP22.19■■□□□ 1.14
C9orf3-222ENST00000496567 PTPRNQ16849 979 aa22.19■■□□□ 1.14
C9orf3-222ENST00000496567 INO80DQ53TQ3 878 aaPredicted RBP22.19■■□□□ 1.14
C9orf3-222ENST00000496567 LINGO4Q6UY18 593 aa22.19■■□□□ 1.14
C9orf3-222ENST00000496567 CCDC13Q8IYE1 715 aa22.19■■□□□ 1.14
C9orf3-222ENST00000496567 ATP11CQ8NB49 1132 aa22.19■■□□□ 1.14
C9orf3-222ENST00000496567 FOXQ1Q9C009 403 aa22.19■■□□□ 1.14
C9orf3-222ENST00000496567 R3HDM2Q9Y2K5 976 aaKnown RBP22.19■■□□□ 1.14
C9orf3-222ENST00000496567 GOLGA6L10A0A0M3HER8 536 aa22.18■■□□□ 1.14
C9orf3-222ENST00000496567 MATN3O15232 486 aa22.18■■□□□ 1.14
C9orf3-222ENST00000496567 URI1O94763 535 aaPredicted RBP22.18■■□□□ 1.14
C9orf3-222ENST00000496567 RBP3P10745 1247 aa22.18■■□□□ 1.14
C9orf3-222ENST00000496567 TIE1P35590 1138 aa22.18■■□□□ 1.14
C9orf3-222ENST00000496567 SERPINH1P50454 418 aaKnown RBP22.18■■□□□ 1.14
C9orf3-222ENST00000496567 CLCN6P51797 869 aa22.18■■□□□ 1.14
C9orf3-222ENST00000496567 TUBB2AQ13885 445 aa22.18■■□□□ 1.14
C9orf3-222ENST00000496567 SIX1Q15475 284 aaPredicted RBP22.18■■□□□ 1.14
C9orf3-222ENST00000496567 CCNG2Q16589 344 aa22.18■■□□□ 1.14
C9orf3-222ENST00000496567 FNDC3BQ53EP0 1204 aaKnown RBP22.18■■□□□ 1.14
C9orf3-222ENST00000496567 EGFLAMQ63HQ2 1017 aa22.18■■□□□ 1.14
C9orf3-222ENST00000496567 SH2D3CQ8N5H7 860 aa22.18■■□□□ 1.14
C9orf3-222ENST00000496567 MRGPRX3Q96LB0 322 aa22.18■■□□□ 1.14
C9orf3-222ENST00000496567 FAM118BQ9BPY3 351 aa22.18■■□□□ 1.14
C9orf3-222ENST00000496567 FERMT1Q9BQL6 677 aa22.18■■□□□ 1.14
C9orf3-222ENST00000496567 TUBB2BQ9BVA1 445 aa22.18■■□□□ 1.14
C9orf3-222ENST00000496567 LMAN1LQ9HAT1 526 aa22.18■■□□□ 1.14
C9orf3-222ENST00000496567 MTF2Q9Y483 593 aaPredicted RBP22.18■■□□□ 1.14
C9orf3-222ENST00000496567 KRIT1O00522 736 aa22.17■■□□□ 1.14
C9orf3-222ENST00000496567 MTSS1O43312 755 aa22.17■■□□□ 1.14
C9orf3-222ENST00000496567 RNF40O75150 1001 aa22.17■■□□□ 1.14
C9orf3-222ENST00000496567 MT-CO1P00395 513 aa22.17■■□□□ 1.14
C9orf3-222ENST00000496567 STK19P49842 368 aaPredicted RBP22.17■■□□□ 1.14
C9orf3-222ENST00000496567 ZNF234Q14588 700 aa22.17■■□□□ 1.14
C9orf3-222ENST00000496567 PRKD1Q15139 912 aaPredicted RBP22.17■■□□□ 1.14
C9orf3-222ENST00000496567 HSF5Q4G112 596 aaPredicted RBP22.17■■□□□ 1.14
C9orf3-222ENST00000496567 C2orf27AQ580R0 203 aa22.17■■□□□ 1.14
C9orf3-222ENST00000496567 SLC45A4Q5BKX6 768 aa22.17■■□□□ 1.14
C9orf3-222ENST00000496567 TMCO4Q5TGY1 634 aa22.17■■□□□ 1.14
C9orf3-222ENST00000496567 EMC10Q5UCC4 262 aa22.17■■□□□ 1.14
C9orf3-222ENST00000496567 LEKR1Q6ZMV7 388 aa22.17■■□□□ 1.14
C9orf3-222ENST00000496567 CDKL3Q8IVW4 592 aaPredicted RBP22.17■■□□□ 1.14
C9orf3-222ENST00000496567 PJA1Q8NG27 643 aa22.17■■□□□ 1.14
C9orf3-222ENST00000496567 SLC35B2Q8TB61 432 aa22.17■■□□□ 1.14
C9orf3-222ENST00000496567 USP33Q8TEY7 942 aa22.17■■□□□ 1.14
C9orf3-222ENST00000496567 QKIQ96PU8 341 aaKnown RBP eCLIP22.17■■□□□ 1.14
C9orf3-222ENST00000496567 SLCO3A1Q9UIG8 710 aa22.17■■□□□ 1.14
C9orf3-222ENST00000496567 ATP9BO43861 1147 aa22.16■■□□□ 1.14
C9orf3-222ENST00000496567 CD160O95971 181 aa22.16■■□□□ 1.14
C9orf3-222ENST00000496567 SRCP12931 536 aa22.16■■□□□ 1.14
C9orf3-222ENST00000496567 RENBPP51606 427 aa22.16■■□□□ 1.14
C9orf3-222ENST00000496567 HNRNPDQ14103 355 aaKnown RBP22.16■■□□□ 1.14
C9orf3-222ENST00000496567 MARC1Q5VT66 337 aa22.16■■□□□ 1.14
C9orf3-222ENST00000496567 SDE2Q6IQ49 451 aa22.16■■□□□ 1.14
C9orf3-222ENST00000496567 DARS2Q6PI48 645 aaKnown RBP22.16■■□□□ 1.14
C9orf3-222ENST00000496567 SERPINA13PQ6UXR4 307 aa22.16■■□□□ 1.14
C9orf3-222ENST00000496567 CHPFQ8IZ52 775 aa22.16■■□□□ 1.14
C9orf3-222ENST00000496567 BBS5Q8N3I7 341 aa22.16■■□□□ 1.14
C9orf3-222ENST00000496567 FLCNQ8NFG4 579 aa22.16■■□□□ 1.14
C9orf3-222ENST00000496567 C1orf54Q8WWF1 131 aa22.16■■□□□ 1.14
C9orf3-222ENST00000496567 RBM12Q9NTZ6 932 aaKnown RBP22.16■■□□□ 1.14
C9orf3-222ENST00000496567 SMARCAL1Q9NZC9 954 aa22.16■■□□□ 1.14
C9orf3-222ENST00000496567 CDC23Q9UJX2 597 aa22.16■■□□□ 1.14
C9orf3-222ENST00000496567 HCN2Q9UL51 889 aa22.16■■□□□ 1.14
C9orf3-222ENST00000496567 SIT1Q9Y3P8 196 aa22.16■■□□□ 1.14
C9orf3-222ENST00000496567 BCLAF3A2AJT9 711 aaKnown RBP22.16■■□□□ 1.14
C9orf3-222ENST00000496567 LIASO43766 372 aa22.16■■□□□ 1.14
C9orf3-222ENST00000496567 TRIOO75962 3097 aa22.16■■□□□ 1.14
C9orf3-222ENST00000496567 CCNB1P14635 433 aa22.16■■□□□ 1.14
C9orf3-222ENST00000496567 BYSLQ13895 437 aaKnown RBP22.16■■□□□ 1.14
C9orf3-222ENST00000496567 LBRQ14739 615 aaKnown RBP22.16■■□□□ 1.14
C9orf3-222ENST00000496567 ACCSLQ4AC99 568 aa22.16■■□□□ 1.14
C9orf3-222ENST00000496567 HEATR6Q6AI08 1181 aaKnown RBP22.16■■□□□ 1.14
C9orf3-222ENST00000496567 DRICH1Q6PGQ1 229 aaPredicted RBP22.16■■□□□ 1.14
C9orf3-222ENST00000496567 LRRN4Q8WUT4 740 aa22.16■■□□□ 1.14
C9orf3-222ENST00000496567 ATG4AQ8WYN0 398 aa22.16■■□□□ 1.14
C9orf3-222ENST00000496567 MAML1Q92585 1016 aa22.16■■□□□ 1.14
C9orf3-222ENST00000496567 NKD2Q969F2 451 aaPredicted RBP22.16■■□□□ 1.14
C9orf3-222ENST00000496567 MYO19Q96H55 970 aa22.16■■□□□ 1.14
C9orf3-222ENST00000496567 AP1M1Q9BXS5 423 aa22.16■■□□□ 1.14
C9orf3-222ENST00000496567 CEP44Q9C0F1 390 aa22.16■■□□□ 1.14
C9orf3-222ENST00000496567 HAUS2Q9NVX0 235 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms