RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 GRIA3P42263 894 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 TROAPQ12815 778 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 BMPR2Q13873 1038 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 PLCL1Q15111 1095 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 AOC3Q16853 763 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 ESCO2Q56NI9 601 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 KCNT1Q5JUK3 1230 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 VWA5B1Q5TIE3 1220 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 C12orf60Q5U649 245 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 CORO6Q6QEF8 472 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 LAYNQ6UX15 382 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 CCBE1Q6UXH8 406 aaPredicted RBP8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 DPY19L3Q6ZPD9 716 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 STX19Q8N4C7 294 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 AKAP1Q92667 903 aaKnown RBP eCLIP8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 TNFRSF25Q93038 417 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 TMCO6Q96DC7 493 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 ZNF597Q96LX8 424 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 LENG8Q96PV6 779 aaPredicted RBP8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 NACC1Q96RE7 527 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 PHOX2BQ99453 314 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 TTYH2Q9BSA4 534 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 CLPBQ9H078 707 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 WDR70Q9NW82 654 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 MAP3K20Q9NYL2 800 aaKnown RBP8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 KANSL3Q9P2N6 904 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 COG5Q9UP83 839 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 AP4E1Q9UPM8 1137 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 MYH11P35749 1972 aa8.31□□□□□ -1.08
CRNKL1-205ENST00000496549 H0YIN7 160 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 TFECO14948 347 aaPredicted RBP8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 CKMT2P17540 419 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 C4BPBP20851 252 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 SLC7A1P30825 629 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 ELK3P41970 407 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 POU6F2P78424 691 aaPredicted RBP8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 RUNX1T1Q06455 604 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 EPS8Q12929 822 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 UBE2SQ16763 222 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 TBRG1Q3YBR2 411 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 CYP4A22Q5TCH4 519 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 ZNF517Q6ZMY9 492 aaPredicted RBP8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 KCNH5Q8NCM2 988 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 ENKURQ8TC29 256 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 NSUN6Q8TEA1 469 aaKnown RBP8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 SLC35C1Q96A29 364 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 FAM149B1Q96BN6 582 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 PAWRQ96IZ0 340 aaKnown RBP8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 LPIN3Q9BQK8 851 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 XPNPEP1Q9NQW7 623 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 TNFRSF10DQ9UBN6 386 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 MAU2Q9Y6X3 613 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 NRXN3Q9Y4C0 1643 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 LOC102724428A0A0B4J2F2 783 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 YKT6O15498 198 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 PAPSS1O43252 624 aaPredicted RBP8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 PIAS1O75925 651 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 AKAP3O75969 853 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 GLDCP23378 1020 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 AP2S1P53680 142 aaPredicted RBP8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 SIK1P57059 783 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 RAB25P57735 213 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 SRP54P61011 504 aaKnown RBP8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 ABCE1P61221 599 aaKnown RBP8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 DGCR6Q14129 220 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 KIF19Q2TAC6 998 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 OTUD3Q5T2D3 398 aaPredicted RBP8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 N4BP2L1Q5TBK1 243 aaPredicted RBP8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 AGAP6Q5VW22 663 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 POLNQ7Z5Q5 900 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 P2RY8Q86VZ1 359 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 GLIS3Q8NEA6 775 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 HCAR2Q8TDS4 363 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 ZNF641Q96N77 438 aaPredicted RBP8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 AGAP4Q96P64 663 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 ELOVL6Q9H5J4 265 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 PRDM11Q9NQV5 511 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 KBTBD13C9JR72 458 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 ACOX3O15254 700 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 KCNJ13O60928 360 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 HLA-DRAP01903 254 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 ITGB3P05106 788 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 EPHA3P29320 983 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 CD40LGP29965 261 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 CLCQ05315 142 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 BSPRYQ5W0U4 402 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 UNC5AQ6ZN44 842 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 BNIPLQ7Z465 357 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 KCTD20Q7Z5Y7 419 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 STK32CQ86UX6 486 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 KIF18BQ86Y91 864 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 DAGLBQ8NCG7 672 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 GALNT11Q8NCW6 608 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 SNAPC3Q92966 411 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 MARK4Q96L34 752 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 DLC1Q96QB1 1528 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 C17orf62Q9BQA9 187 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 ACP6Q9NPH0 428 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 BLOC1S4Q9NUP1 217 aa8.3□□□□□ -1.08
CRNKL1-205ENST00000496549 KLHL11Q9NVR0 708 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms