RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 OR2A12Q8NGT7 310 aa12.11□□□□□ -0.47
THBS3-208ENST00000496332 PIP4K2CQ8TBX8 421 aa12.11□□□□□ -0.47
THBS3-208ENST00000496332 NTAN1Q96AB6 310 aa12.11□□□□□ -0.47
THBS3-208ENST00000496332 CCDC114Q96M63 670 aa12.11□□□□□ -0.47
THBS3-208ENST00000496332 CNTNAP3BQ96NU0 1288 aa12.11□□□□□ -0.47
THBS3-208ENST00000496332 CNTNAP3Q9BZ76 1288 aa12.11□□□□□ -0.47
THBS3-208ENST00000496332 HAUS4Q9H6D7 363 aa12.11□□□□□ -0.47
THBS3-208ENST00000496332 EBF2Q9HAK2 575 aa12.11□□□□□ -0.47
THBS3-208ENST00000496332 NDFIP2Q9NV92 336 aa12.11□□□□□ -0.47
THBS3-208ENST00000496332 AIPL1Q9NZN9 384 aa12.11□□□□□ -0.47
THBS3-208ENST00000496332 DNAI1Q9UI46 699 aa12.11□□□□□ -0.47
THBS3-208ENST00000496332 ANGPTL2Q9UKU9 493 aa12.11□□□□□ -0.47
THBS3-208ENST00000496332 ANKRD6Q9Y2G4 727 aa12.11□□□□□ -0.47
THBS3-208ENST00000496332 FARP1Q9Y4F1 1045 aaPredicted RBP12.11□□□□□ -0.47
THBS3-208ENST00000496332 SNX11Q9Y5W9 270 aa12.11□□□□□ -0.47
THBS3-208ENST00000496332 NUMA1Q14980 2115 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 TBC1D3DA0A087WVF3 549 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 TBC1D3IA0A087WXS9 549 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 TBC1D3EA0A087X179 549 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 TBC1D3KA0A087X1G2 549 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 SPAARA0A1B0GVQ0 90 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 TBC1D3FA6NER0 549 aaPredicted RBP12.1□□□□□ -0.47
THBS3-208ENST00000496332 C10orf142B7Z368 130 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 TBC1D3LB9A6J9 549 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 SLC7A4O43246 635 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 ZMPSTE24O75844 475 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 LRIG2O94898 1065 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 CTSLP07711 333 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 TBC1D3HP0C7X1 549 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 CHRNA3P32297 505 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 ACVRL1P37023 503 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 GRIA4P48058 902 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 MAPKAPK2P49137 400 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 CCR5P51681 352 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 CLCN6P51797 869 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 RACK1P63244 317 aaKnown RBP12.1□□□□□ -0.47
THBS3-208ENST00000496332 SLC20A2Q08357 652 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 SCAPQ12770 1279 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 CNTN1Q12860 1018 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 E4F1Q66K89 784 aaPredicted RBP12.1□□□□□ -0.47
THBS3-208ENST00000496332 TBC1D3GQ6DHY5 549 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 TBC1D3CQ6IPX1 549 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 PPP1R2P3Q6NXS1 205 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 LAYNQ6UX15 382 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 ZNF571Q7Z3V5 609 aaPredicted RBP12.1□□□□□ -0.47
THBS3-208ENST00000496332 ADAT2Q7Z6V5 191 aaKnown RBP12.1□□□□□ -0.47
THBS3-208ENST00000496332 NLRP14Q86W24 1093 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 TBC1D3Q8IZP1 549 aaPredicted RBP12.1□□□□□ -0.47
THBS3-208ENST00000496332 PYROXD2Q8N2H3 581 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 CHST14Q8NCH0 376 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 FAM131CQ96AQ9 280 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 TBC1D31Q96DN5 1066 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 VCPIP1Q96JH7 1222 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 SLC6A18Q96N87 628 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 CAMK1GQ96NX5 476 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 CNPY3Q9BT09 278 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 ACE2Q9BYF1 805 aaPredicted RBP12.1□□□□□ -0.47
THBS3-208ENST00000496332 EDEM3Q9BZQ6 932 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 TTYH3Q9C0H2 523 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 TNKS2Q9H2K2 1166 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 RETREG1Q9H6L5 497 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 TMEM248Q9NWD8 314 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 NEU3Q9UQ49 428 aa12.1□□□□□ -0.47
THBS3-208ENST00000496332 FNDC3AQ9Y2H6 1198 aaKnown RBP12.1□□□□□ -0.47
THBS3-208ENST00000496332 KPNA3O00505 521 aaPredicted RBP12.09□□□□□ -0.47
THBS3-208ENST00000496332 KCNK3O14649 394 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 PLRG1O43660 514 aaKnown RBP12.09□□□□□ -0.47
THBS3-208ENST00000496332 ZNF821O75541 412 aaPredicted RBP12.09□□□□□ -0.47
THBS3-208ENST00000496332 ZNF883P0CG24 379 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 PTMSP20962 102 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 L1CAMP32004 1257 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 ETFBP38117 255 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 PRKCIP41743 596 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 RECQLP46063 649 aaPredicted RBP12.09□□□□□ -0.47
THBS3-208ENST00000496332 SERPINH1P50454 418 aaKnown RBP12.09□□□□□ -0.47
THBS3-208ENST00000496332 PPP2CBP62714 309 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 PPP2CAP67775 309 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 FAM193AP78312 1265 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 SIM1P81133 766 aaPredicted RBP12.09□□□□□ -0.47
THBS3-208ENST00000496332 ARF5P84085 180 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 SHC2P98077 582 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 FANCCQ00597 558 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 OGDHQ02218 1023 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 KLHL30Q0D2K2 578 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 FOXC1Q12948 553 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 MAMLD1Q13495 774 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 EFHC2Q5JST6 749 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 KCNT1Q5JUK3 1230 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 AGBL4Q5VU57 503 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 C22orf39Q6P5X5 142 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 DNAAF5Q86Y56 855 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 NAXDQ8IW45 347 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 TMIEQ8NEW7 156 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 ARHGEF2Q92974 986 aaKnown RBP12.09□□□□□ -0.47
THBS3-208ENST00000496332 CEP44Q9C0F1 390 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 KDM4CQ9H3R0 1056 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 AASDHPPTQ9NRN7 309 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 TM7SF3Q9NS93 570 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 PARVAQ9NVD7 372 aa12.09□□□□□ -0.47
THBS3-208ENST00000496332 FZD10Q9ULW2 581 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms