RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, human

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS52-222	ENST00000495981	GLUD2	P49448	558 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	SCNN1G	P51170	649 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	PSMC5	P62195	406 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	RPS16	P62249	146 aa	Known RBP	4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	RNASEL	Q05823	741 aa	Known RBP	4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	LAMTOR4	Q0VGL1	99 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	TBX2	Q13207	712 aa	Predicted RBP	4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	RAB39A	Q14964	217 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	NAB2	Q15742	525 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	MAN2A1	Q16706	1144 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	FLYWCH1	Q4VC44	716 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	C19orf54	Q5BKX5	351 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	HYI	Q5T013	277 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	VASN	Q6EMK4	673 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	LIN54	Q6MZP7	749 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	BLOC1S2	Q6QNY1	142 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	ETV3L	Q6ZN32	361 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	TPRG1	Q6ZUI0	275 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	CENPQ	Q7L2Z9	268 aa	Predicted RBP	4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	GET4	Q7L5D6	327 aa	Predicted RBP	4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	TAS1R1	Q7RTX1	841 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	CATSPER4	Q7RTX7	472 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	BLID	Q8IZY5	108 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	ZNF843	Q8N446	348 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	DCBLD1	Q8N8Z6	715 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	ATP11C	Q8NB49	1132 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	URGCP	Q8TCY9	931 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	CCHCR1	Q8TD31	782 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	KBTBD7	Q8WVZ9	684 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	PSPC1	Q8WXF1	523 aa	Known RBP	4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	TMEM143	Q96AN5	459 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	NMD3	Q96D46	503 aa	Known RBP	4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	CCDC51	Q96ER9	411 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	B3GALT6	Q96L58	329 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	NELL2	Q99435	816 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	KXD1	Q9BQD3	176 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	TACO1	Q9BSH4	297 aa	Known RBP	4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	C1orf43	Q9BWL3	253 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	OSBPL6	Q9BZF3	934 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	RNF32	Q9H0A6	362 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	MRPL46	Q9H2W6	279 aa	Known RBP	4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	LDAH	Q9H6V9	325 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	OBP2B	Q9NPH6	170 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	AFF4	Q9UHB7	1163 aa	Known RBP	4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	RAB23	Q9ULC3	237 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	NAP1L2	Q9ULW6	460 aa	Predicted RBP	4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	SLC5A6	Q9Y289	635 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	PRG3	Q9Y2Y8	225 aa	Predicted RBP	4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	NCAN	O14594	1321 aa		4.61	□□□□□ -1.67
VPS52-222	ENST00000495981	OBSL1	O75147	1896 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	ADAMTS20	P59510	1910 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	CREBBP	Q92793	2442 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	SPAAR	A0A1B0GVQ0	90 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	FAM234B	A2RU67	622 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	GOLGA6L3	A6NEY3	463 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	PRSS29P	A6NIE9	313 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	TISP43	B9A030	160 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981		B9A039	149 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	F2RL2	O00254	374 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	CDX4	O14627	284 aa	Predicted RBP	4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	PTGES	O14684	152 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	EPB41L2	O43491	1005 aa	Known RBP	4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	KLHL18	O94889	574 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	DEXI	O95424	95 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	CTDNEP1	O95476	244 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	GCFC2	P16383	781 aa	Known RBP	4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	ARF4	P18085	180 aa	Predicted RBP	4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	HDC	P19113	662 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	FPR1	P21462	350 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	GLRA2	P23416	452 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	ECHS1	P30084	290 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	YWHAB	P31946	246 aa	Known RBP	4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	DDIT3	P35638	169 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	RAP1GAP	P47736	663 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	QARS	P47897	775 aa	Known RBP	4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	RXRG	P48443	463 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	NLRP5	P59047	1200 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	PTEN	P60484	403 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	ST3GAL1	Q11201	340 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	SCAP	Q12770	1279 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	FOXO1	Q12778	655 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	GRIK3	Q13003	919 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	MTM1	Q13496	603 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	NR1I3	Q14994	352 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	NONO	Q15233	471 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	KHDC1L	Q5JSQ8	128 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	FAM26F	Q5R3K3	315 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	FKBP15	Q5T1M5	1219 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	INTS11	Q5TA45	600 aa	Known RBP	4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	EMC10	Q5UCC4	262 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	TMEM200B	Q69YZ2	307 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	FUT10	Q6P4F1	479 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	SLC23A3	Q6PIS1	610 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981		Q6ZS52	159 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	C1orf122	Q6ZSJ8	110 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	NEK8	Q86SG6	692 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	KBTBD6	Q86V97	674 aa		4.6	□□□□□ -1.67
VPS52-222	ENST00000495981	C4orf19	Q8IY42	314 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms