RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 TBC1D3IA0A087WXS9 549 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 TBC1D3EA0A087X179 549 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 TBC1D3KA0A087X1G2 549 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 A0A1B0GVM2 712 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 TBC1D3FA6NER0 549 aaPredicted RBP9.04□□□□□ -0.96
SORT1-208ENST00000495777 TCAF2A6NFQ2 919 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 KCNU1A8MYU2 1149 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 TBC1D3LB9A6J9 549 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 F5H5T6 163 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 ALOX15BO15296 676 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 RRP8O43159 456 aaKnown RBP9.04□□□□□ -0.96
SORT1-208ENST00000495777 MAGEC1O60732 1142 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 RTN2O75298 545 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 TRUB2O95900 331 aaKnown RBP9.04□□□□□ -0.96
SORT1-208ENST00000495777 TBC1D3HP0C7X1 549 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 PDGFRAP16234 1089 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 FERP16591 822 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 NNMTP40261 264 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 STAT1P42224 750 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 OXCT1P55809 520 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 YWHAZP63104 245 aaKnown RBP9.04□□□□□ -0.96
SORT1-208ENST00000495777 PITX1P78337 314 aaPredicted RBP9.04□□□□□ -0.96
SORT1-208ENST00000495777 INSM1Q01101 510 aaPredicted RBP9.04□□□□□ -0.96
SORT1-208ENST00000495777 SEMG2Q02383 582 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 C19orf57Q0VDD7 668 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 FAM46CQ5VWP2 391 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 TBC1D3GQ6DHY5 549 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 TBC1D3CQ6IPX1 549 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 PPP1R2P3Q6NXS1 205 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 DENND1BQ6P3S1 775 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.04□□□□□ -0.96
SORT1-208ENST00000495777 LRRC69Q6ZNQ3 347 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 RRAGAQ7L523 313 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 DSG4Q86SJ6 1040 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 PRPF39Q86UA1 669 aaKnown RBP9.04□□□□□ -0.96
SORT1-208ENST00000495777 ERICH1Q86X53 443 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 ZNF677Q86XU0 584 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 TBC1D3Q8IZP1 549 aaPredicted RBP9.04□□□□□ -0.96
SORT1-208ENST00000495777 CCAR2Q8N163 923 aaKnown RBP9.04□□□□□ -0.96
SORT1-208ENST00000495777 ATP6V0D2Q8N8Y2 350 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 TMEM145Q8NBT3 493 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 OR8D1Q8WZ84 308 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 SLC39A7Q92504 469 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 SHC3Q92529 594 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 BAP1Q92560 729 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 FGF11Q92914 225 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 NAA15Q9BXJ9 866 aaKnown RBP9.04□□□□□ -0.96
SORT1-208ENST00000495777 TTYH3Q9C0H2 523 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 GANQ9H2C0 597 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 ST7Q9NRC1 585 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.04□□□□□ -0.96
SORT1-208ENST00000495777 DNAJC12Q9UKB3 198 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 SARDHQ9UL12 918 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 CEP83Q9Y592 693 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 RAI2Q9Y5P3 530 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 AK5Q9Y6K8 562 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 ZNF462Q96JM2 2506 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 PLXNA2O75051 1894 aa9.04□□□□□ -0.96
SORT1-208ENST00000495777 AKR1B15C9JRZ8 316 aaPredicted RBP9.03□□□□□ -0.96
SORT1-208ENST00000495777 E5RJQ4 531 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 F8VZ95 297 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 PRAMEF26H0Y7S4 382 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 TRIM38O00635 465 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 CAPN9O14815 690 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 MCF2LO15068 1137 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 MED7O43513 233 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 BRINP1O60477 761 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 RNGTTO60942 597 aaKnown RBP9.03□□□□□ -0.96
SORT1-208ENST00000495777 PRB1P04280 392 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 GLI1P08151 1106 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 GLDCP23378 1020 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 TAS2R38P59533 333 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 POLR2FP61218 127 aaKnown RBP9.03□□□□□ -0.96
SORT1-208ENST00000495777 TLE3Q04726 772 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 PTK2Q05397 1052 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 CCDC173Q0VFZ6 552 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 CNTN1Q12860 1018 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 ZNF211Q13398 564 aaPredicted RBP9.03□□□□□ -0.96
SORT1-208ENST00000495777 RAPGEF1Q13905 1077 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 TBC1D25Q3MII6 688 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 RABGAP1LQ5R372 815 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 TMC6Q7Z403 805 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 VPS36Q86VN1 386 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 CIR1Q86X95 450 aaPredicted RBP9.03□□□□□ -0.96
SORT1-208ENST00000495777 SLC25A45Q8N413 288 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 OR52K2Q8NGK3 314 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 FCRL3Q96P31 734 aaPredicted RBP9.03□□□□□ -0.96
SORT1-208ENST00000495777 SLC2A13Q96QE2 648 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 FEM1AQ9BSK4 669 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 PREBQ9HCU5 417 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 SIX2Q9NPC8 291 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 ASNSD1Q9NWL6 643 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 SLC12A6Q9UHW9 1150 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 CLCA2Q9UQC9 943 aa9.03□□□□□ -0.96
SORT1-208ENST00000495777 TEX51A0A1B0GUA7 166 aa9.02□□□□□ -0.97
SORT1-208ENST00000495777 C1QTNF3-AMACRE9PGA6 284 aa9.02□□□□□ -0.97
SORT1-208ENST00000495777 SIGLEC6O43699 453 aa9.02□□□□□ -0.97
SORT1-208ENST00000495777 MFAP3LO75121 409 aa9.02□□□□□ -0.97
SORT1-208ENST00000495777 GFPT2O94808 682 aa9.02□□□□□ -0.97
SORT1-208ENST00000495777 GYPCP04921 128 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms