RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 CHRNA3P32297 505 aa18■□□□□ 0.47
TMEM53-209ENST00000495630 PPP1R2P41236 205 aa18■□□□□ 0.47
TMEM53-209ENST00000495630 GABREP78334 506 aa18■□□□□ 0.47
TMEM53-209ENST00000495630 KRT83P78385 493 aa18■□□□□ 0.47
TMEM53-209ENST00000495630 C5orf22Q49AR2 442 aa18■□□□□ 0.47
TMEM53-209ENST00000495630 EFHC1Q5JVL4 640 aa18■□□□□ 0.47
TMEM53-209ENST00000495630 DEFB106AQ8N104 65 aa18■□□□□ 0.47
TMEM53-209ENST00000495630 OR13H1Q8NG92 308 aa18■□□□□ 0.47
TMEM53-209ENST00000495630 KLK6Q92876 244 aa18■□□□□ 0.47
TMEM53-209ENST00000495630 APOLD1Q96LR9 279 aa18■□□□□ 0.47
TMEM53-209ENST00000495630 DUSP23Q9BVJ7 150 aa18■□□□□ 0.47
TMEM53-209ENST00000495630 DPH1Q9BZG8 443 aa18■□□□□ 0.47
TMEM53-209ENST00000495630 POLR1BQ9H9Y6 1135 aa18■□□□□ 0.47
TMEM53-209ENST00000495630 ASNSD1Q9NWL6 643 aa18■□□□□ 0.47
TMEM53-209ENST00000495630 HOOK1Q9UJC3 728 aaKnown RBP18■□□□□ 0.47
TMEM53-209ENST00000495630 CFAP46Q8IYW2 2715 aa17.99■□□□□ 0.47
TMEM53-209ENST00000495630 SRCP12931 536 aa17.99■□□□□ 0.47
TMEM53-209ENST00000495630 CDH4P55283 916 aa17.99■□□□□ 0.47
TMEM53-209ENST00000495630 CENPCQ03188 943 aa17.99■□□□□ 0.47
TMEM53-209ENST00000495630 FOXR2Q6PJQ5 311 aa17.99■□□□□ 0.47
TMEM53-209ENST00000495630 ABI3BPQ7Z7G0 1075 aa17.99■□□□□ 0.47
TMEM53-209ENST00000495630 OR2A12Q8NGT7 310 aa17.99■□□□□ 0.47
TMEM53-209ENST00000495630 GRAMD1AQ96CP6 724 aa17.99■□□□□ 0.47
TMEM53-209ENST00000495630 MYOCQ99972 504 aa17.99■□□□□ 0.47
TMEM53-209ENST00000495630 CALN1Q9BXU9 219 aa17.99■□□□□ 0.47
TMEM53-209ENST00000495630 GDPD2Q9HCC8 539 aa17.99■□□□□ 0.47
TMEM53-209ENST00000495630 UBE2TQ9NPD8 197 aaPredicted RBP17.99■□□□□ 0.47
TMEM53-209ENST00000495630 DYRK4Q9NR20 520 aa17.99■□□□□ 0.47
TMEM53-209ENST00000495630 VANGL2Q9ULK5 521 aa17.99■□□□□ 0.47
TMEM53-209ENST00000495630 HS3ST3A1Q9Y663 406 aa17.99■□□□□ 0.47
TMEM53-209ENST00000495630 SYNJ2BP-COX16A0A087WUM0 186 aa17.98■□□□□ 0.47
TMEM53-209ENST00000495630 KPNA3O00505 521 aaPredicted RBP17.98■□□□□ 0.47
TMEM53-209ENST00000495630 RIOK3O14730 519 aaKnown RBP17.98■□□□□ 0.47
TMEM53-209ENST00000495630 THAP12O43422 761 aa17.98■□□□□ 0.47
TMEM53-209ENST00000495630 CSO75390 466 aaKnown RBP17.98■□□□□ 0.47
TMEM53-209ENST00000495630 MT-CO1P00395 513 aa17.98■□□□□ 0.47
TMEM53-209ENST00000495630 PRNPP04156 253 aa17.98■□□□□ 0.47
TMEM53-209ENST00000495630 CTSLP07711 333 aa17.98■□□□□ 0.47
TMEM53-209ENST00000495630 HNRNPKP61978 463 aaKnown RBP eCLIP17.98■□□□□ 0.47
TMEM53-209ENST00000495630 PDCLQ13371 301 aa17.98■□□□□ 0.47
TMEM53-209ENST00000495630 ARHGAP40Q5TG30 622 aa17.98■□□□□ 0.47
TMEM53-209ENST00000495630 IGF2-ASQ6U949 168 aa17.98■□□□□ 0.47
TMEM53-209ENST00000495630 Q6ZSR6 202 aa17.98■□□□□ 0.47
TMEM53-209ENST00000495630 ENOSF1Q7L5Y1 443 aa17.98■□□□□ 0.47
TMEM53-209ENST00000495630 TRIM59Q8IWR1 403 aa17.98■□□□□ 0.47
TMEM53-209ENST00000495630 ATP11CQ8NB49 1132 aa17.98■□□□□ 0.47
TMEM53-209ENST00000495630 SNRNP27Q8WVK2 155 aaKnown RBP17.98■□□□□ 0.47
TMEM53-209ENST00000495630 KCNE4Q8WWG9 221 aa17.98■□□□□ 0.47
TMEM53-209ENST00000495630 C2orf49Q9BVC5 232 aaPredicted RBP17.98■□□□□ 0.47
TMEM53-209ENST00000495630 HDAC8Q9BY41 377 aa17.98■□□□□ 0.47
TMEM53-209ENST00000495630 INTS2Q9H0H0 1204 aaKnown RBP17.98■□□□□ 0.47
TMEM53-209ENST00000495630 MUC3BQ9H195 1237 aa17.98■□□□□ 0.47
TMEM53-209ENST00000495630 OSBPL2Q9H1P3 480 aa17.98■□□□□ 0.47
TMEM53-209ENST00000495630 CPNE5Q9HCH3 593 aa17.98■□□□□ 0.47
TMEM53-209ENST00000495630 THSD1Q9NS62 852 aa17.98■□□□□ 0.47
TMEM53-209ENST00000495630 COX16Q9P0S2 106 aa17.98■□□□□ 0.47
TMEM53-209ENST00000495630 HS3ST4Q9Y661 456 aa17.98■□□□□ 0.47
TMEM53-209ENST00000495630 LY6G6EA0A0G2JKS1 128 aa17.97■□□□□ 0.47
TMEM53-209ENST00000495630 K7ESM1 405 aa17.97■□□□□ 0.47
TMEM53-209ENST00000495630 KLK10O43240 276 aa17.97■□□□□ 0.47
TMEM53-209ENST00000495630 LZTS3O60299 673 aaPredicted RBP17.97■□□□□ 0.47
TMEM53-209ENST00000495630 HSF2BPO75031 334 aa17.97■□□□□ 0.47
TMEM53-209ENST00000495630 PCDH8O95206 1070 aa17.97■□□□□ 0.47
TMEM53-209ENST00000495630 GNA14O95837 355 aa17.97■□□□□ 0.47
TMEM53-209ENST00000495630 CD44P16070 742 aaKnown RBP17.97■□□□□ 0.47
TMEM53-209ENST00000495630 GNA15P30679 374 aa17.97■□□□□ 0.47
TMEM53-209ENST00000495630 IRAK1P51617 712 aa17.97■□□□□ 0.47
TMEM53-209ENST00000495630 CLDN2P57739 230 aa17.97■□□□□ 0.47
TMEM53-209ENST00000495630 TTI2Q6NXR4 508 aa17.97■□□□□ 0.47
TMEM53-209ENST00000495630 ERN2Q76MJ5 926 aaKnown RBP17.97■□□□□ 0.47
TMEM53-209ENST00000495630 WDTC1Q8N5D0 677 aa17.97■□□□□ 0.47
TMEM53-209ENST00000495630 ARRDC3Q96B67 414 aa17.97■□□□□ 0.47
TMEM53-209ENST00000495630 TIGD1Q96MW7 591 aa17.97■□□□□ 0.47
TMEM53-209ENST00000495630 NOX5Q96PH1 765 aa17.97■□□□□ 0.47
TMEM53-209ENST00000495630 ASCL3Q9NQ33 180 aa17.97■□□□□ 0.47
TMEM53-209ENST00000495630 NCKIPSDQ9NZQ3 722 aa17.97■□□□□ 0.47
TMEM53-209ENST00000495630 ZFR2Q9UPR6 939 aaKnown RBP17.97■□□□□ 0.47
TMEM53-209ENST00000495630 SSUH2Q9Y2M2 353 aa17.97■□□□□ 0.47
TMEM53-209ENST00000495630 U3KQA8 63 aa17.97■□□□□ 0.47
TMEM53-209ENST00000495630 DOCK9Q9BZ29 2069 aa17.96■□□□□ 0.47
TMEM53-209ENST00000495630 GOLGA6L4A6NEF3 574 aa17.96■□□□□ 0.47
TMEM53-209ENST00000495630 A6NNZ2 444 aa17.96■□□□□ 0.47
TMEM53-209ENST00000495630 PAGE1O75459 146 aa17.96■□□□□ 0.47
TMEM53-209ENST00000495630 AFPP02771 609 aaKnown RBP17.96■□□□□ 0.47
TMEM53-209ENST00000495630 CLCN6P51797 869 aa17.96■□□□□ 0.47
TMEM53-209ENST00000495630 MARSP56192 900 aaKnown RBP17.96■□□□□ 0.47
TMEM53-209ENST00000495630 VAC14Q08AM6 782 aa17.96■□□□□ 0.47
TMEM53-209ENST00000495630 NME3Q13232 169 aa17.96■□□□□ 0.47
TMEM53-209ENST00000495630 ISXQ2M1V0 245 aa17.96■□□□□ 0.47
TMEM53-209ENST00000495630 TMEM259Q4ZIN3 620 aa17.96■□□□□ 0.47
TMEM53-209ENST00000495630 GCNT7Q6ZNI0 430 aa17.96■□□□□ 0.47
TMEM53-209ENST00000495630 C11orf57Q6ZUT1 292 aaPredicted RBP17.96■□□□□ 0.47
TMEM53-209ENST00000495630 C14orf80Q86SX3 495 aa17.96■□□□□ 0.47
TMEM53-209ENST00000495630 SLC22A18ASQ8N1D0 253 aa17.96■□□□□ 0.47
TMEM53-209ENST00000495630 MAPK15Q8TD08 544 aa17.96■□□□□ 0.47
TMEM53-209ENST00000495630 FEM1CQ96JP0 617 aa17.96■□□□□ 0.47
TMEM53-209ENST00000495630 PPP1R13BQ96KQ4 1090 aa17.96■□□□□ 0.47
TMEM53-209ENST00000495630 BMFQ96LC9 184 aa17.96■□□□□ 0.47
TMEM53-209ENST00000495630 FAM81BQ96LP2 452 aa17.96■□□□□ 0.47
TMEM53-209ENST00000495630 CPXM1Q96SM3 734 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms