RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 TYRP14679 529 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 HOXA11P31270 313 aaPredicted RBP7.02□□□□□ -1.29
VIM-207ENST00000495528 NLRP5P59047 1200 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 PSMC1P62191 440 aaKnown RBP7.02□□□□□ -1.29
VIM-207ENST00000495528 ZXDCQ2QGD7 858 aaPredicted RBP7.02□□□□□ -1.29
VIM-207ENST00000495528 AGAP9Q5VTM2 703 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 PLA2G4FQ68DD2 849 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 C15orf39Q6ZRI6 1047 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 ANO5Q75V66 913 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 RHOT2Q8IXI1 618 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 SLC44A3Q8N4M1 653 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 NSUN7Q8NE18 718 aaKnown RBP7.02□□□□□ -1.29
VIM-207ENST00000495528 RDM1Q8NG50 284 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 TTC8Q8TAM2 541 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 URGCPQ8TCY9 931 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 KCNG4Q8TDN1 519 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 CACTINQ8WUQ7 758 aaKnown RBP7.02□□□□□ -1.29
VIM-207ENST00000495528 ZNF503Q96F45 646 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 CDK5RAP3Q96JB5 506 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 MYADMQ96S97 322 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 TMEM175Q9BSA9 504 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 RNF26Q9BY78 433 aaPredicted RBP7.02□□□□□ -1.29
VIM-207ENST00000495528 VPS11Q9H270 941 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 MINDY3Q9H8M7 445 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 RSAD1Q9HA92 442 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 MRPL17Q9NRX2 175 aaKnown RBP7.02□□□□□ -1.29
VIM-207ENST00000495528 AGPAT5Q9NUQ2 364 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 MARCH5Q9NX47 278 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 GOLGA6AQ9NYA3 693 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 FAM30AQ9NZY2 134 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 IGSF9Q9P2J2 1179 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 WNT16Q9UBV4 365 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 USP25Q9UHP3 1055 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 REXO2Q9Y3B8 237 aaKnown RBP7.02□□□□□ -1.29
VIM-207ENST00000495528 CHST2Q9Y4C5 530 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 CYP3A7-CYP3A51PA0A087WV96 503 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 CCDC78A2IDD5 438 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 F8W810 466 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 H3BML4 177 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 INPPL1O15357 1258 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 TEX28O15482 410 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 MARCH6O60337 910 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 SLC43A1O75387 559 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 RFPL2O75678 378 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 DEXIO95424 95 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 AHSGP02765 367 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 SPATA31D3P0C874 917 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 CYP3A7P24462 503 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 OR1G1P47890 313 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 PSMC5P62195 406 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 HMGN5P82970 282 aaKnown RBP7.01□□□□□ -1.29
VIM-207ENST00000495528 GUCY1B3Q02153 619 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 TUBA3CQ13748 450 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 LLGL1Q15334 1064 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 GFOD2Q3B7J2 385 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 LSM12Q3MHD2 195 aaKnown RBP7.01□□□□□ -1.29
VIM-207ENST00000495528 TUBA3EQ6PEY2 450 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 SPATA31D4Q6ZUB0 917 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 OVCH2Q7RTZ1 564 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 DAAM2Q86T65 1068 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 PPP1R3BQ86XI6 285 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 COLGALT2Q8IYK4 626 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 RNF168Q8IYW5 571 aaPredicted RBP7.01□□□□□ -1.29
VIM-207ENST00000495528 CCDC148Q8NFR7 591 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 CMASQ8NFW8 434 aaPredicted RBP7.01□□□□□ -1.29
VIM-207ENST00000495528 ETNPPLQ8TBG4 499 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 SLC25A43Q8WUT9 341 aaPredicted RBP7.01□□□□□ -1.29
VIM-207ENST00000495528 PRPF31Q8WWY3 499 aaKnown RBP7.01□□□□□ -1.29
VIM-207ENST00000495528 TMEM143Q96AN5 459 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 RMDN1Q96DB5 314 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 RPS6KC1Q96S38 1066 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 TLR10Q9BXR5 811 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 IMPG2Q9BZV3 1241 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 WDCPQ9H6R7 721 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 BRD9Q9H8M2 597 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 WDR6Q9NNW5 1121 aaKnown RBP7.01□□□□□ -1.29
VIM-207ENST00000495528 GJB4Q9NTQ9 266 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 KLHL11Q9NVR0 708 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 MIOSQ9NXC5 875 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 JKAMPQ9P055 326 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 WRAP73Q9P2S5 460 aaPredicted RBP7.01□□□□□ -1.29
VIM-207ENST00000495528 EPS15L1Q9UBC2 864 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 STK39Q9UEW8 545 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 CA14Q9ULX7 337 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 PRG3Q9Y2Y8 225 aaPredicted RBP7.01□□□□□ -1.29
VIM-207ENST00000495528 R4GN57 208 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 SPTBN4Q9H254 2564 aa7.01□□□□□ -1.29
VIM-207ENST00000495528 MYH9P35579 1960 aaKnown RBP7□□□□□ -1.29
VIM-207ENST00000495528 NID2Q14112 1375 aa7□□□□□ -1.29
VIM-207ENST00000495528 MED19A0JLT2 244 aaPredicted RBP7□□□□□ -1.29
VIM-207ENST00000495528 DIRC3C9JPN6 131 aa7□□□□□ -1.29
VIM-207ENST00000495528 MATN3O15232 486 aa7□□□□□ -1.29
VIM-207ENST00000495528 B3GALT2O43825 422 aa7□□□□□ -1.29
VIM-207ENST00000495528 NDUFA10O95299 355 aa7□□□□□ -1.29
VIM-207ENST00000495528 LMNAP02545 664 aaKnown RBP7□□□□□ -1.29
VIM-207ENST00000495528 URODP06132 367 aa7□□□□□ -1.29
VIM-207ENST00000495528 DCNP07585 359 aaKnown RBP7□□□□□ -1.29
VIM-207ENST00000495528 SYT1P21579 422 aa7□□□□□ -1.29
VIM-207ENST00000495528 NR4A1P22736 598 aa7□□□□□ -1.29
VIM-207ENST00000495528 GCSHP23434 173 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms