RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 TEX28O15482 410 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 ATP9BO43861 1147 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 OAS1P00973 400 aaKnown RBP16.82■□□□□ 0.28
ATG4B-225ENST00000494465 ERVK-10P10266 1014 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 ADRA1DP25100 572 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 CCNFP41002 786 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 ETV4P43268 484 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 MAPKAPK2P49137 400 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 SERPINB9P50453 376 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 MGAT5Q09328 741 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 SLC10A7Q0GE19 358 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 NAB1Q13506 487 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 PDK4Q16654 411 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 ANKRD20A4Q4UJ75 823 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 LGSNQ5TDP6 509 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 RFWD3Q6PCD5 774 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 PACS1Q6VY07 963 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 SPATS2Q86XZ4 545 aaKnown RBP16.82■□□□□ 0.28
ATG4B-225ENST00000494465 CACNA2D3Q8IZS8 1091 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 LGI2Q8N0V4 545 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 TEX26Q8N6G2 289 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 ZNF669Q96BR6 464 aaPredicted RBP16.82■□□□□ 0.28
ATG4B-225ENST00000494465 MFSD3Q96ES6 412 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 ELAC2Q9BQ52 826 aaKnown RBP16.82■□□□□ 0.28
ATG4B-225ENST00000494465 TBL1YQ9BQ87 522 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 CHRAC1Q9NRG0 131 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 FAM169AQ9Y6X4 670 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 C2orf78A6NCI8 922 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 F5H5T6 163 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 LPXNO60711 386 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 RAMP2O60895 175 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 STC2O76061 302 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 OR1E1P30953 314 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 RENBPP51606 427 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 TNK2Q07912 1038 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 POLD3Q15054 466 aaPredicted RBP16.82■□□□□ 0.28
ATG4B-225ENST00000494465 PARP15Q460N3 678 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 MROH9Q5TGP6 573 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 CDHR3Q6ZTQ4 885 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 DNAJB7Q7Z6W7 309 aaPredicted RBP16.82■□□□□ 0.28
ATG4B-225ENST00000494465 CFAP52Q8N1V2 620 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 IPMKQ8NFU5 416 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 SPOCK2Q92563 424 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 MRGPRX2Q96LB1 330 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 KLHL5Q96PQ7 755 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 NACA2Q9H009 215 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 MRPL17Q9NRX2 175 aaKnown RBP16.82■□□□□ 0.28
ATG4B-225ENST00000494465 GKN1Q9NS71 199 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 SOX13Q9UN79 622 aa16.82■□□□□ 0.28
ATG4B-225ENST00000494465 MAGEB16A2A368 324 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 CARNS1A5YM72 827 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 PRRG1O14668 218 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 DHRS4L1P0CG22 281 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 ACVRL1P37023 503 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 HARS2P49590 506 aaKnown RBP16.81■□□□□ 0.28
ATG4B-225ENST00000494465 GEMP55040 296 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 SERINC3Q13530 473 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 IHHQ14623 411 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 SMAD1Q15797 465 aaKnown RBP16.81■□□□□ 0.28
ATG4B-225ENST00000494465 CGB2Q6NT52 195 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 TIFABQ6ZNK6 161 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.81■□□□□ 0.28
ATG4B-225ENST00000494465 CDKL2Q92772 493 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 WBP2Q969T9 261 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 PLD4Q96BZ4 506 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 FICDQ9BVA6 458 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 NSRP1Q9H0G5 558 aaKnown RBP16.81■□□□□ 0.28
ATG4B-225ENST00000494465 ZBP1Q9H171 429 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 SLC25A51Q9H1U9 297 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 INSL5Q9Y5Q6 135 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 ALPK3Q96L96 1907 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 BPTFQ12830 3046 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 H3BNC9 293 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 AP3B1O00203 1094 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 SNX3O60493 162 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 CNTFP26441 200 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 PPM1AP35813 382 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 YBEYP58557 167 aaPredicted RBP16.81■□□□□ 0.28
ATG4B-225ENST00000494465 ZKSCAN8Q15776 578 aaPredicted RBP16.81■□□□□ 0.28
ATG4B-225ENST00000494465 HHATQ5VTY9 493 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 KDELC1Q6UW63 502 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 RANBP10Q6VN20 620 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 DENND1CQ8IV53 801 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 GPR65Q8IYL9 337 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 AZIN2Q96A70 460 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 IMP4Q96G21 291 aaKnown RBP16.81■□□□□ 0.28
ATG4B-225ENST00000494465 PRICKLE1Q96MT3 831 aaPredicted RBP16.81■□□□□ 0.28
ATG4B-225ENST00000494465 ZNF778Q96MU6 729 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 PPP1R2P1Q96PQ5 205 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 KIFC1Q9BW19 673 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 KLF16Q9BXK1 252 aaPredicted RBP16.81■□□□□ 0.28
ATG4B-225ENST00000494465 SP110Q9HB58 689 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 RXFP1Q9HBX9 757 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 MKS1Q9NXB0 559 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 DENND4CQ5VZ89 1909 aa16.81■□□□□ 0.28
ATG4B-225ENST00000494465 ATXN2Q99700 1313 aaKnown RBP16.8■□□□□ 0.28
ATG4B-225ENST00000494465 FGF18O76093 207 aa16.8■□□□□ 0.28
ATG4B-225ENST00000494465 SLC11A2P49281 568 aa16.8■□□□□ 0.28
ATG4B-225ENST00000494465 LBX1P52954 281 aa16.8■□□□□ 0.28
ATG4B-225ENST00000494465 HTRA4P83105 476 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms