RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 ZNF510Q9Y2H8 683 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 AAR2Q9Y312 384 aaKnown RBP6.93□□□□□ -1.3
MSH5-217ENST00000494458 TTLL3Q9Y4R7 772 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 MTCL1Q9Y4B5 1905 aaKnown RBP6.93□□□□□ -1.3
MSH5-217ENST00000494458 CHD9Q3L8U1 2897 aa6.93□□□□□ -1.3
MSH5-217ENST00000494458 DENND4CQ5VZ89 1909 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.92□□□□□ -1.3
MSH5-217ENST00000494458 FAM237BA0A1B0GVD1 139 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 A0A1B0GVM2 712 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 LOC285095A0A1B0GVY8 99 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 E2F8A0AVK6 867 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 C2orf72A6NCS6 295 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 TCAF2A6NFQ2 919 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 GOLGA6L10A6NI86 522 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 F5H5T6 163 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 GOLGA8MH3BSY2 632 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 J3KR12 359 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 RGS16O15492 202 aaPredicted RBP6.92□□□□□ -1.3
MSH5-217ENST00000494458 KDELR3O43731 214 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 RAMP2O60895 175 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 ANXA9O76027 345 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 CD160O95971 181 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 HLA-DQB2P05538 268 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 IVLP07476 585 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 MMP2P08253 660 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 SPATA31D3P0C874 917 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 SYN1P17600 705 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 PTPN2P17706 415 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 HDCP19113 662 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 NFKB1P19838 968 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 CR2P20023 1033 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 NR1D1P20393 614 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 CES1P23141 567 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 GABRR2P28476 465 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 CORO1AP31146 461 aaKnown RBP6.92□□□□□ -1.3
MSH5-217ENST00000494458 IRS1P35568 1242 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 CCR2P41597 374 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 PLK1P53350 603 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 MAGOHP61326 146 aaKnown RBP6.92□□□□□ -1.3
MSH5-217ENST00000494458 GNA12Q03113 381 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 IFFO1Q0D2I5 559 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 MPP3Q13368 585 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 RFTN1Q14699 578 aaPredicted RBP6.92□□□□□ -1.3
MSH5-217ENST00000494458 POLD3Q15054 466 aaPredicted RBP6.92□□□□□ -1.3
MSH5-217ENST00000494458 SHHQ15465 462 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 KLHL38Q2WGJ6 581 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 ANO4Q32M45 955 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 BBS9Q3SYG4 887 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 RABGAP1LQ5R372 815 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 C9orf50Q5SZB4 431 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 FAM182AQ5T1J6 154 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 FAXCQ5TGI0 409 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 FYB2Q5VWT5 728 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 DMRTA1Q5VZB9 504 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 KCTD16Q68DU8 428 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 TXNDC8Q6A555 127 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 FAM109BQ6ICB4 259 aaPredicted RBP6.92□□□□□ -1.3
MSH5-217ENST00000494458 CXorf57Q6NSI4 855 aaKnown RBP6.92□□□□□ -1.3
MSH5-217ENST00000494458 TMEM184AQ6ZMB5 413 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 UNC5AQ6ZN44 842 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 TIFABQ6ZNK6 161 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 SPATA31D4Q6ZUB0 917 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 SPRED2Q7Z698 418 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 LINC00523Q86TU6 105 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 TRABD2AQ86V40 505 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 CHSY1Q86X52 802 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 DENND1CQ8IV53 801 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 HS6ST3Q8IZP7 471 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 LGI2Q8N0V4 545 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 SH2D3CQ8N5H7 860 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 CCDC33Q8N5R6 958 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 ARFGAP2Q8N6H7 521 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 OR52K2Q8NGK3 314 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 GSDMBQ8TAX9 411 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 DENND1AQ8TEH3 1009 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 FBF1Q8TES7 1133 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 DEPDC1BQ8WUY9 529 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 PTCD2Q8WV60 388 aaKnown RBP6.92□□□□□ -1.3
MSH5-217ENST00000494458 DCAKDQ8WVC6 231 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 ZNF707Q96C28 371 aaPredicted RBP6.92□□□□□ -1.3
MSH5-217ENST00000494458 MRGPRX2Q96LB1 330 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 RPRD1AQ96P16 312 aaPredicted RBP6.92□□□□□ -1.3
MSH5-217ENST00000494458 PSKH2Q96QS6 385 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 XPO6Q96QU8 1125 aaKnown RBP6.92□□□□□ -1.3
MSH5-217ENST00000494458 TGS1Q96RS0 853 aaKnown RBP6.92□□□□□ -1.3
MSH5-217ENST00000494458 CYP2S1Q96SQ9 504 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 CYTH2Q99418 400 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 GDF15Q99988 308 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 LBHD1Q9BQE6 289 aaPredicted RBP6.92□□□□□ -1.3
MSH5-217ENST00000494458 KIFC1Q9BW19 673 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 LMAN2LQ9H0V9 348 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 STMN4Q9H169 189 aaPredicted RBP6.92□□□□□ -1.3
MSH5-217ENST00000494458 CCDC134Q9H6E4 229 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 CNOT10Q9H9A5 744 aaKnown RBP6.92□□□□□ -1.3
MSH5-217ENST00000494458 LRRC40Q9H9A6 602 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 MRM3Q9HC36 420 aaKnown RBP6.92□□□□□ -1.3
MSH5-217ENST00000494458 ENTPD7Q9NQZ7 604 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 RBM22Q9NW64 420 aaKnown RBP eCLIP6.92□□□□□ -1.3
MSH5-217ENST00000494458 ZDHHC7Q9NXF8 308 aa6.92□□□□□ -1.3
MSH5-217ENST00000494458 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms