RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 C18orf25Q96B23 403 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-219ENST00000494323 ELSPBP1Q96BH3 223 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 MBD6Q96DN6 1003 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 MVB12AQ96EY5 273 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 BORCS6Q96GS4 357 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 ZBTB45Q96K62 511 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-219ENST00000494323 IFT74Q96LB3 600 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 ZMAT2Q96NC0 199 aaKnown RBP5.59□□□□□ -1.51
PTCD3-219ENST00000494323 TCHPQ9BT92 498 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 POLR3CQ9BUI4 534 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-219ENST00000494323 OR10A2Q9H208 303 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 EPC1Q9H2F5 836 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 ZNF334Q9HCZ1 680 aaPredicted RBP5.59□□□□□ -1.51
PTCD3-219ENST00000494323 TUFT1Q9NNX1 390 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 RBM12Q9NTZ6 932 aaKnown RBP5.59□□□□□ -1.51
PTCD3-219ENST00000494323 CEP72Q9P209 647 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 FBXL5Q9UKA1 691 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 GMEB2Q9UKD1 530 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 RAB23Q9ULC3 237 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 ZDHHC9Q9Y397 364 aa5.59□□□□□ -1.51
PTCD3-219ENST00000494323 PATJQ8NI35 1801 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 GON4LQ3T8J9 2241 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 A0A1W2PR48 441 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 TMEM189-UBE2V1I3L0A0 370 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 PODXLO00592 558 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 ZNF197O14709 1029 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 ZNF263O14978 683 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 HTRA2O43464 458 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-219ENST00000494323 MOSPD3O75425 235 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 LY86O95711 162 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 OR4Q2P0C623 313 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 CHRNB1P11230 501 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 HARSP12081 509 aaKnown RBP5.58□□□□□ -1.52
PTCD3-219ENST00000494323 TDGF1P13385 188 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 PDCP20941 246 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 RPA1P27694 616 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 CCT6AP40227 531 aaKnown RBP5.58□□□□□ -1.52
PTCD3-219ENST00000494323 NAMPTP43490 491 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 EFNA5P52803 228 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 SLC16A1P53985 500 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 PEX3P56589 373 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 SPAG1Q07617 926 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 PPP3CAQ08209 521 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 TWF1Q12792 350 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 TRIM29Q14134 588 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 SIM2Q14190 667 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-219ENST00000494323 TEAD2Q15562 447 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 DCAF4L1Q3SXM0 396 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 C3orf36Q3SXR2 165 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 ZNF568Q3ZCX4 644 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 CTXN3Q4LDR2 81 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 AGBL4Q5VU57 503 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 SLC8B1Q6J4K2 584 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 PPP4R4Q6NUP7 873 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 BORAQ6PGQ7 559 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 FAM180AQ6UWF9 173 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 VITQ6UXI7 678 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 PDZD4Q76G19 769 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-219ENST00000494323 RTL10Q7L3V2 364 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 CLEC14AQ86T13 490 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 MFSD6LQ8IWD5 586 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 CELF5Q8N6W0 485 aaKnown RBP5.58□□□□□ -1.52
PTCD3-219ENST00000494323 ERMNQ8TAM6 284 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 PPP1R35Q8TAP8 253 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 SMARCD2Q92925 531 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 RSPRY1Q96DX4 576 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 UROC1Q96N76 676 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 RTKNQ9BST9 563 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 BHMT2Q9H2M3 363 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 SLITRK6Q9H5Y7 841 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 DMRT3Q9NQL9 472 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 PRMT8Q9NR22 394 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-219ENST00000494323 C2orf42Q9NWW7 574 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 TNFSF13BQ9Y275 285 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 INSL5Q9Y5Q6 135 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 PIAS3Q9Y6X2 628 aa5.58□□□□□ -1.52
PTCD3-219ENST00000494323 KMT2BQ9UMN6 2715 aaPredicted RBP5.58□□□□□ -1.52
PTCD3-219ENST00000494323 ZMYM2Q9UBW7 1377 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 CITO14578 2027 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 TICRRQ7Z2Z1 1910 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 ANO9A1A5B4 782 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 CCDC154A6NI56 674 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 SLC38A8A6NNN8 435 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 HEPACAM2A8MVW5 462 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 E9PMD0 336 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 H3BML4 177 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 H7C4K7 107 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 TPP1O14773 563 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 SLC16A4O15374 487 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 EPB41L2O43491 1005 aaKnown RBP5.57□□□□□ -1.52
PTCD3-219ENST00000494323 NOBOXO60393 691 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 RETP07949 1114 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 ADRB1P08588 477 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 OR52Z1P0C646 297 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 ZNF888P0CJ79 500 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-219ENST00000494323 GAAP10253 952 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 HNRNPLP14866 589 aaKnown RBP eCLIP5.57□□□□□ -1.52
PTCD3-219ENST00000494323 RHCEP18577 417 aa5.57□□□□□ -1.52
PTCD3-219ENST00000494323 MARCKSP29966 332 aaPredicted RBP5.57□□□□□ -1.52
PTCD3-219ENST00000494323 CDC25AP30304 524 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms