RNA–Protein interactions for RNA: ENST00000494297.5

SRPRB-205, Transcript of SRP receptor subunit beta, humanhuman

TSL 2

Gene SRPRB, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-205ENST00000494297 PARP15Q460N3 678 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 ATP13A4Q4VNC1 1196 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 FNDC3BQ53EP0 1204 aaKnown RBP5.5□□□□□ -1.53
SRPRB-205ENST00000494297 USP39Q53GS9 565 aaKnown RBP5.5□□□□□ -1.53
SRPRB-205ENST00000494297 INO80DQ53TQ3 878 aaPredicted RBP5.5□□□□□ -1.53
SRPRB-205ENST00000494297 C9orf64Q5T6V5 341 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 AFMIDQ63HM1 303 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 IL31Q6EBC2 164 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 RETSATQ6NUM9 610 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 ZNF662Q6ZS27 426 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 C11orf74Q86VG3 221 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 CPNE8Q86YQ8 564 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 TMPRSS6Q8IU80 811 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 MAP7D3Q8IWC1 876 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 TXLNBQ8N3L3 684 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 SH2D3CQ8N5H7 860 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 CCDC112Q8NEF3 446 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 OR7D4Q8NG98 312 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 OR2T3Q8NH03 318 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 UBE2Q2Q8WVN8 375 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 GAB3Q8WWW8 586 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 CASKIN2Q8WXE0 1202 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 HSPH1Q92598 858 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 ISG20Q96AZ6 181 aaKnown RBP5.5□□□□□ -1.53
SRPRB-205ENST00000494297 FAF2Q96CS3 445 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 ZC3H10Q96K80 434 aaKnown RBP5.5□□□□□ -1.53
SRPRB-205ENST00000494297 RPL10LQ96L21 214 aaKnown RBP5.5□□□□□ -1.53
SRPRB-205ENST00000494297 CSPG4P5Q96PW8 444 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 HHIPQ96QV1 700 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 C2orf49Q9BVC5 232 aaPredicted RBP5.5□□□□□ -1.53
SRPRB-205ENST00000494297 CEP44Q9C0F1 390 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 SLC39A8Q9C0K1 460 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 MKRN2Q9H000 416 aaKnown RBP5.5□□□□□ -1.53
SRPRB-205ENST00000494297 MUC3BQ9H195 1237 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 RSPH9Q9H1X1 276 aaPredicted RBP5.5□□□□□ -1.53
SRPRB-205ENST00000494297 EPC1Q9H2F5 836 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 PRDM16Q9HAZ2 1276 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 PCDH18Q9HCL0 1135 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 ATP13A1Q9HD20 1204 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.5□□□□□ -1.53
SRPRB-205ENST00000494297 GPATCH2LQ9NWQ4 482 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 RAPGEFL1Q9UHV5 662 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 VPS51Q9UID3 782 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 SALL4Q9UJQ4 1053 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 SLC25A13Q9UJS0 675 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 VPS28Q9UK41 221 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 HPCAL4Q9UM19 191 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 SCML1Q9UN30 329 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 RAD54BQ9Y620 910 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 DUSP10Q9Y6W6 482 aa5.5□□□□□ -1.53
SRPRB-205ENST00000494297 EDDM13A0A1B0GTR0 161 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 ZSCAN5CA6NGD5 496 aaPredicted RBP5.49□□□□□ -1.53
SRPRB-205ENST00000494297 ARHGAP42A6NI28 874 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 C3orf70A6NLC5 250 aaPredicted RBP5.49□□□□□ -1.53
SRPRB-205ENST00000494297 TTC34A8MYJ7 566 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 RASA4BC9J798 803 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 CBX4O00257 560 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 MCF2LO15068 1137 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 ALOX15BO15296 676 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 RASA4O43374 803 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 BUB1BO60566 1050 aaPredicted RBP5.49□□□□□ -1.53
SRPRB-205ENST00000494297 SNAP91O60641 907 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 SIN3BO75182 1162 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 ZNF821O75541 412 aaPredicted RBP5.49□□□□□ -1.53
SRPRB-205ENST00000494297 RPP40O75818 363 aaKnown RBP5.49□□□□□ -1.53
SRPRB-205ENST00000494297 MT-CO1P00395 513 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 CD48P09326 243 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 HLA-EP13747 358 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 AMPD1P23109 780 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 GLDCP23378 1020 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 KDELR1P24390 212 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 ACVRL1P37023 503 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 SSR1P43307 286 aaKnown RBP5.49□□□□□ -1.53
SRPRB-205ENST00000494297 STK19P49842 368 aaPredicted RBP5.49□□□□□ -1.53
SRPRB-205ENST00000494297 SERPINH1P50454 418 aaKnown RBP5.49□□□□□ -1.53
SRPRB-205ENST00000494297 CDH6P55285 790 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 GEMIN4P57678 1058 aaKnown RBP5.49□□□□□ -1.53
SRPRB-205ENST00000494297 RPS14P62263 151 aaKnown RBP5.49□□□□□ -1.53
SRPRB-205ENST00000494297 KIF5AQ12840 1032 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 DPYSL3Q14195 570 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 PAFAH1B3Q15102 231 aaKnown RBP5.49□□□□□ -1.53
SRPRB-205ENST00000494297 DLG2Q15700 870 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 IFI16Q16666 785 aaKnown RBP5.49□□□□□ -1.53
SRPRB-205ENST00000494297 MAP7D1Q3KQU3 841 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 ACCSLQ4AC99 568 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 ANKRD20A8PQ5CZ79 823 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 PPP6R3Q5H9R7 873 aaPredicted RBP5.49□□□□□ -1.53
SRPRB-205ENST00000494297 SPDYCQ5MJ68 293 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 HEATR6Q6AI08 1181 aaKnown RBP5.49□□□□□ -1.53
SRPRB-205ENST00000494297 ANO7Q6IWH7 933 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 C11orf63Q6NUN7 778 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 BRICD5Q6PL45 260 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 LRRC49Q8IUZ0 686 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 ARHGAP12Q8IWW6 846 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 RHOT1Q8IXI2 618 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 RNF10Q8N5U6 811 aaKnown RBP5.49□□□□□ -1.53
SRPRB-205ENST00000494297 ATP11CQ8NB49 1132 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 SUMF1Q8NBK3 374 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 KCTD6Q8NC69 237 aa5.49□□□□□ -1.53
SRPRB-205ENST00000494297 ACRBPQ8NEB7 543 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms