RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 HS3ST2Q9Y278 367 aa15.04■□□□□ -0
ATG4B-224ENST00000494132 FCF1Q9Y324 198 aaKnown RBP15.04■□□□□ -0
ATG4B-224ENST00000494132 TRPM6Q9BX84 2022 aa15.04■□□□□ -0
ATG4B-224ENST00000494132 CBFA2T2O43439 604 aa15.03■□□□□ -0
ATG4B-224ENST00000494132 ZMPSTE24O75844 475 aa15.03■□□□□ -0
ATG4B-224ENST00000494132 CTSLP07711 333 aa15.03■□□□□ -0
ATG4B-224ENST00000494132 SERPINF2P08697 491 aa15.03■□□□□ -0
ATG4B-224ENST00000494132 C7P10643 843 aa15.03■□□□□ -0
ATG4B-224ENST00000494132 DRD3P35462 400 aa15.03■□□□□ -0
ATG4B-224ENST00000494132 DPP6P42658 865 aa15.03■□□□□ -0
ATG4B-224ENST00000494132 LIMK1P53667 647 aa15.03■□□□□ -0
ATG4B-224ENST00000494132 C22orf39Q6P5X5 142 aa15.03■□□□□ -0
ATG4B-224ENST00000494132 NCEH1Q6PIU2 408 aa15.03■□□□□ -0
ATG4B-224ENST00000494132 LAYNQ6UX15 382 aa15.03■□□□□ -0
ATG4B-224ENST00000494132 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.03■□□□□ -0
ATG4B-224ENST00000494132 ZNF354CQ86Y25 554 aa15.03■□□□□ -0
ATG4B-224ENST00000494132 NETO2Q8NC67 525 aa15.03■□□□□ -0
ATG4B-224ENST00000494132 CADM4Q8NFZ8 388 aa15.03■□□□□ -0
ATG4B-224ENST00000494132 PIP4K2CQ8TBX8 421 aa15.03■□□□□ -0
ATG4B-224ENST00000494132 DNASE2BQ8WZ79 361 aa15.03■□□□□ -0
ATG4B-224ENST00000494132 SYN2Q92777 582 aaPredicted RBP15.03■□□□□ -0
ATG4B-224ENST00000494132 ARHGEF2Q92974 986 aaKnown RBP15.03■□□□□ -0
ATG4B-224ENST00000494132 BIRC7Q96CA5 298 aa15.03■□□□□ -0
ATG4B-224ENST00000494132 BTBD6Q96KE9 485 aa15.03■□□□□ -0
ATG4B-224ENST00000494132 SNRNP25Q9BV90 132 aaKnown RBP15.03■□□□□ -0
ATG4B-224ENST00000494132 THAP2Q9H0W7 228 aa15.03■□□□□ -0
ATG4B-224ENST00000494132 DHX35Q9H5Z1 703 aaKnown RBP15.03■□□□□ -0
ATG4B-224ENST00000494132 SGK2Q9HBY8 427 aa15.03■□□□□ -0
ATG4B-224ENST00000494132 CAPN10Q9HC96 672 aa15.03■□□□□ -0
ATG4B-224ENST00000494132 SCML1Q9UN30 329 aa15.03■□□□□ -0
ATG4B-224ENST00000494132 AP4E1Q9UPM8 1137 aa15.03■□□□□ -0
ATG4B-224ENST00000494132 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.03■□□□□ -0
ATG4B-224ENST00000494132 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.03■□□□□ -02e-8■□□□□ 10.9
ATG4B-224ENST00000494132 CABIN1Q9Y6J0 2220 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 PCNX2A6NKB5 2137 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 ADH1BP00325 375 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 TCF4P15884 667 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 DESP17661 470 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 C5AR1P21730 350 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 MIPP30301 263 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 L1CAMP32004 1257 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 HOXD12P35452 270 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 MAPKAPK2P49137 400 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 SERPINH1P50454 418 aaKnown RBP15.02■□□□□ -0
ATG4B-224ENST00000494132 VASPP50552 380 aaPredicted RBP15.02■□□□□ -0
ATG4B-224ENST00000494132 DNA2P51530 1060 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 ATXN3P54252 364 aaPredicted RBP15.02■□□□□ -0
ATG4B-224ENST00000494132 GALCP54803 685 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 GFPT1Q06210 699 aaPredicted RBP15.02■□□□□ -0
ATG4B-224ENST00000494132 PPM1JQ5JR12 505 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 CCDC122Q5T0U0 273 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 ZNF783Q6ZMS7 281 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 USP30Q70CQ3 517 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 VPS36Q86VN1 386 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 VSTM4Q8IW00 320 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 OR14C36Q8NHC7 312 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 CEP76Q8TAP6 659 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 GRIN3AQ8TCU5 1115 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 ARHGEF26Q96DR7 871 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 IQCDQ96DY2 449 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 TRIM11Q96F44 468 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 EPAS1Q99814 870 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 SUSD2Q9UGT4 822 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 BZW2Q9Y6E2 419 aaKnown RBP15.02■□□□□ -0
ATG4B-224ENST00000494132 SCINQ9Y6U3 715 aa15.02■□□□□ -0
ATG4B-224ENST00000494132 TDRD6O60522 2096 aaKnown RBP15.02□□□□□ -0.01
ATG4B-224ENST00000494132 A0A1B0GTW7 788 aa15.01□□□□□ -0.01
ATG4B-224ENST00000494132 ARHGAP33O14559 1287 aa15.01□□□□□ -0.01
ATG4B-224ENST00000494132 TM4SF5O14894 197 aa15.01□□□□□ -0.01
ATG4B-224ENST00000494132 MCF2LO15068 1137 aa15.01□□□□□ -0.01
ATG4B-224ENST00000494132 RAMP2O60895 175 aa15.01□□□□□ -0.01
ATG4B-224ENST00000494132 LRCH4O75427 683 aa15.01□□□□□ -0.01
ATG4B-224ENST00000494132 ZNF821O75541 412 aaPredicted RBP15.01□□□□□ -0.01
ATG4B-224ENST00000494132 CD160O95971 181 aa15.01□□□□□ -0.01
ATG4B-224ENST00000494132 IGHV4-34P06331 123 aa15.01□□□□□ -0.01
ATG4B-224ENST00000494132 MYBL1P10243 752 aa15.01□□□□□ -0.01
ATG4B-224ENST00000494132 GNSP15586 552 aa15.01□□□□□ -0.01
ATG4B-224ENST00000494132 GOT1P17174 413 aa15.01□□□□□ -0.01
ATG4B-224ENST00000494132 CHRNA3P32297 505 aa15.01□□□□□ -0.01
ATG4B-224ENST00000494132 EIF4A3P38919 411 aaKnown RBP15.01□□□□□ -0.01
ATG4B-224ENST00000494132 ADPRHP54922 357 aa15.01□□□□□ -0.01
ATG4B-224ENST00000494132 TPI1P60174 286 aa15.01□□□□□ -0.01
ATG4B-224ENST00000494132 PPP2CBP62714 309 aa15.01□□□□□ -0.01
ATG4B-224ENST00000494132 PPP2CAP67775 309 aa15.01□□□□□ -0.01
ATG4B-224ENST00000494132 CNTN1Q12860 1018 aa15.01□□□□□ -0.01
ATG4B-224ENST00000494132 SEMA3BQ13214 749 aa15.01□□□□□ -0.01
ATG4B-224ENST00000494132 POLD3Q15054 466 aaPredicted RBP15.01□□□□□ -0.01
ATG4B-224ENST00000494132 PPP6R3Q5H9R7 873 aaPredicted RBP15.01□□□□□ -0.01
ATG4B-224ENST00000494132 KIAA0895LQ68EN5 471 aa15.01□□□□□ -0.01
ATG4B-224ENST00000494132 SPECC1LQ69YQ0 1117 aa15.01□□□□□ -0.01
ATG4B-224ENST00000494132 RETSATQ6NUM9 610 aa15.01□□□□□ -0.01
ATG4B-224ENST00000494132 ALKBH5Q6P6C2 394 aaKnown RBP15.01□□□□□ -0.01
ATG4B-224ENST00000494132 DPY19L3Q6ZPD9 716 aa15.01□□□□□ -0.01
ATG4B-224ENST00000494132 CYP4V2Q6ZWL3 525 aaPredicted RBP15.01□□□□□ -0.01
ATG4B-224ENST00000494132 ERMP1Q7Z2K6 904 aa15.01□□□□□ -0.01
ATG4B-224ENST00000494132 MINDY1Q8N5J2 469 aa15.01□□□□□ -0.01
ATG4B-224ENST00000494132 RTL3Q8N8U3 475 aaKnown RBP15.01□□□□□ -0.01
ATG4B-224ENST00000494132 OR2A12Q8NGT7 310 aa15.01□□□□□ -0.01
ATG4B-224ENST00000494132 OR6K2Q8NGY2 324 aa15.01□□□□□ -0.01
ATG4B-224ENST00000494132 KCTD15Q96SI1 283 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms