RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 ZSCAN30Q86W11 494 aa14.86□□□□□ -0.03
BRCA1-223ENST00000494123 KDM1BQ8NB78 822 aa14.86□□□□□ -0.03
BRCA1-223ENST00000494123 TXNDC5Q8NBS9 432 aaKnown RBP14.86□□□□□ -0.03
BRCA1-223ENST00000494123 NSMCE1Q8WV22 266 aa14.86□□□□□ -0.03
BRCA1-223ENST00000494123 PBKQ96KB5 322 aa14.86□□□□□ -0.03
BRCA1-223ENST00000494123 MRGPRX3Q96LB0 322 aa14.86□□□□□ -0.03
BRCA1-223ENST00000494123 OSBPL9Q96SU4 736 aa14.86□□□□□ -0.03
BRCA1-223ENST00000494123 ACOX2Q99424 681 aa14.86□□□□□ -0.03
BRCA1-223ENST00000494123 HERPUD2Q9BSE4 406 aa14.86□□□□□ -0.03
BRCA1-223ENST00000494123 CHRDQ9H2X0 955 aa14.86□□□□□ -0.03
BRCA1-223ENST00000494123 SAE1Q9UBE0 346 aaPredicted RBP14.86□□□□□ -0.03
BRCA1-223ENST00000494123 UBA2Q9UBT2 640 aaPredicted RBP14.86□□□□□ -0.03
BRCA1-223ENST00000494123 HCN2Q9UL51 889 aa14.86□□□□□ -0.03
BRCA1-223ENST00000494123 SNX12Q9UMY4 172 aa14.86□□□□□ -0.03
BRCA1-223ENST00000494123 HS3ST2Q9Y278 367 aa14.86□□□□□ -0.03
BRCA1-223ENST00000494123 STON1Q9Y6Q2 735 aa14.86□□□□□ -0.03
BRCA1-223ENST00000494123 MUC22E2RYF6 1773 aaPredicted RBP14.86□□□□□ -0.03
BRCA1-223ENST00000494123 CXorf51AA0A1B0GTR3 108 aa14.85□□□□□ -0.03
BRCA1-223ENST00000494123 J3KR12 359 aa14.85□□□□□ -0.03
BRCA1-223ENST00000494123 PI15O43692 258 aa14.85□□□□□ -0.03
BRCA1-223ENST00000494123 DEKP35659 375 aaKnown RBP14.85□□□□□ -0.03
BRCA1-223ENST00000494123 SERPINH1P50454 418 aaKnown RBP14.85□□□□□ -0.03
BRCA1-223ENST00000494123 CLCN6P51797 869 aa14.85□□□□□ -0.03
BRCA1-223ENST00000494123 EOGTQ5NDL2 527 aa14.85□□□□□ -0.03
BRCA1-223ENST00000494123 TIGD7Q6NT04 549 aaPredicted RBP14.85□□□□□ -0.03
BRCA1-223ENST00000494123 SYT10Q6XYQ8 523 aa14.85□□□□□ -0.03
BRCA1-223ENST00000494123 BMP8AQ7Z5Y6 402 aa14.85□□□□□ -0.03
BRCA1-223ENST00000494123 METTL3Q86U44 580 aaKnown RBP14.85□□□□□ -0.03
BRCA1-223ENST00000494123 SLC13A5Q86YT5 568 aaPredicted RBP14.85□□□□□ -0.03
BRCA1-223ENST00000494123 FBXL6Q8N531 539 aa14.85□□□□□ -0.03
BRCA1-223ENST00000494123 SH2D3CQ8N5H7 860 aa14.85□□□□□ -0.03
BRCA1-223ENST00000494123 TTC13Q8NBP0 860 aa14.85□□□□□ -0.03
BRCA1-223ENST00000494123 IER2Q9BTL4 223 aa14.85□□□□□ -0.03
BRCA1-223ENST00000494123 SLCO3A1Q9UIG8 710 aa14.85□□□□□ -0.03
BRCA1-223ENST00000494123 SHROOM3Q8TF72 1996 aa14.85□□□□□ -0.03
BRCA1-223ENST00000494123 MYO18AQ92614 2054 aaKnown RBP14.85□□□□□ -0.03
BRCA1-223ENST00000494123 FAM86C2PA6NEL3 165 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 CHURC1-FNTBB4DL54 471 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 WASH3PC4AMC7 463 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 MAFKO60675 156 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 MT-CO1P00395 513 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 FGGP02679 453 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 EPHX1P07099 455 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 SRCP12931 536 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 HOXB2P14652 356 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 TCP1P17987 556 aaKnown RBP14.84□□□□□ -0.03
BRCA1-223ENST00000494123 OTUD4Q01804 1114 aaKnown RBP14.84□□□□□ -0.03
BRCA1-223ENST00000494123 AP1B1Q10567 949 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 STARD3Q14849 445 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 DLG2Q15700 870 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 LONRF2Q1L5Z9 754 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 NYAP1Q6ZVC0 841 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 ADAT2Q7Z6V5 191 aaKnown RBP14.84□□□□□ -0.03
BRCA1-223ENST00000494123 ZNF366Q8N895 744 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 ACTL9Q8TC94 416 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 MAIP1Q8WWC4 291 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 CASKIN2Q8WXE0 1202 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 HDAC11Q96DB2 347 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 BRD8Q9H0E9 1235 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 SUN2Q9UH99 717 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 MMP17Q9ULZ9 603 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 TTC34A8MYJ7 566 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 K7ERQ8 282 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 SGK1O00141 431 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 MCF2LO15068 1137 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 SYNCRIPO60506 623 aaKnown RBP14.84□□□□□ -0.03
BRCA1-223ENST00000494123 NEBLO76041 1014 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 HLA-EP13747 358 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 PRKCHP24723 683 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 CCNCP24863 283 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 VASPP50552 380 aaPredicted RBP14.84□□□□□ -0.03
BRCA1-223ENST00000494123 KLF1Q13351 362 aaPredicted RBP14.84□□□□□ -0.03
BRCA1-223ENST00000494123 INO80DQ53TQ3 878 aaPredicted RBP14.84□□□□□ -0.03
BRCA1-223ENST00000494123 PAPD7Q5XG87 772 aaKnown RBP14.84□□□□□ -0.03
BRCA1-223ENST00000494123 PKN3Q6P5Z2 889 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 ZC3H18Q86VM9 953 aaKnown RBP14.84□□□□□ -0.03
BRCA1-223ENST00000494123 CCDC13Q8IYE1 715 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 BBS5Q8N3I7 341 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 SPEM1Q8N4L4 309 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 MYO19Q96H55 970 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 ZNF599Q96NL3 588 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 OLFM3Q96PB7 478 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 LGMNQ99538 433 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 PDFQ9HBH1 243 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 FCF1Q9Y324 198 aaKnown RBP14.84□□□□□ -0.03
BRCA1-223ENST00000494123 ACTL7AQ9Y615 435 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 SAR1BQ9Y6B6 198 aa14.84□□□□□ -0.03
BRCA1-223ENST00000494123 MUC3AQ02505 3323 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 EDDM13A0A1B0GTR0 161 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 TCRBV7S2A1N4TA0A589 114 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 H7C0C1 242 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 KIF2AO00139 706 aaPredicted RBP14.83□□□□□ -0.04
BRCA1-223ENST00000494123 CES2O00748 559 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 SMAD6O43541 496 aaKnown RBP14.83□□□□□ -0.04
BRCA1-223ENST00000494123 ATP9BO43861 1147 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 BNIP3LO60238 219 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 ADAM23O75077 832 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 TMCC1O94876 653 aa14.83□□□□□ -0.04
BRCA1-223ENST00000494123 CHRM1P11229 460 aaPredicted RBP14.83□□□□□ -0.04
BRCA1-223ENST00000494123 ATP5OP48047 213 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms