RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 NUMBLQ9Y6R0 609 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 A0A096LPK6 155 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 SMIM28A0A1B0GU29 152 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 MOXD2PA6NHM9 499 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 M0QYT0 321 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 CYB561D2O14569 222 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 NPHS1O60500 1241 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 DDHD2O94830 711 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 GSRP00390 522 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 COX4I1P13073 169 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 UQCRBP14927 111 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 PTPN3P26045 913 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 ADRA1BP35368 520 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 PPARGP37231 505 aaPredicted RBP11.69□□□□□ -0.54
RFC4-214ENST00000494047 RPL14P50914 215 aaKnown RBP11.69□□□□□ -0.54
RFC4-214ENST00000494047 GALNT1Q10472 559 aaPredicted RBP11.69□□□□□ -0.54
RFC4-214ENST00000494047 CDC16Q13042 620 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 ITGA9Q13797 1035 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 MAPRE1Q15691 268 aaKnown RBP11.69□□□□□ -0.54
RFC4-214ENST00000494047 PSMD5Q16401 504 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 ANKRD20A4Q4UJ75 823 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 KCTD11Q693B1 232 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 OR52E8Q6IFG1 317 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 ZYG11AQ6WRX3 759 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 STRA8Q7Z7C7 330 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 FAM131BQ86XD5 332 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 PDSS2Q86YH6 399 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 C10orf107Q8IVU9 208 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 DCLK2Q8N568 766 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 KYQ8NBH2 561 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 PCSK9Q8NBP7 692 aaKnown RBP11.69□□□□□ -0.54
RFC4-214ENST00000494047 URGCPQ8TCY9 931 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 COPS5Q92905 334 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 ZFRQ96KR1 1074 aaKnown RBP11.69□□□□□ -0.54
RFC4-214ENST00000494047 SORT1Q99523 831 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 KIFC1Q9BW19 673 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 SENP6Q9GZR1 1112 aaPredicted RBP11.69□□□□□ -0.54
RFC4-214ENST00000494047 C12orf65Q9H3J6 166 aaKnown RBP11.69□□□□□ -0.54
RFC4-214ENST00000494047 EML4Q9HC35 981 aaKnown RBP11.69□□□□□ -0.54
RFC4-214ENST00000494047 KRT82Q9NSB4 513 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 OXSMQ9NWU1 459 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 UTP6Q9NYH9 597 aaKnown RBP11.69□□□□□ -0.54
RFC4-214ENST00000494047 NCKIPSDQ9NZQ3 722 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 TUBGCP4Q9UGJ1 667 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 IPO11Q9UI26 975 aaKnown RBP11.69□□□□□ -0.54
RFC4-214ENST00000494047 CNOT11Q9UKZ1 510 aaKnown RBP11.69□□□□□ -0.54
RFC4-214ENST00000494047 DSEQ9UL01 958 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 RAB26Q9ULW5 256 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 PSMD13Q9UNM6 376 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 CDYLQ9Y232 598 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 Q9Y3F1 56 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 COMMD3-BMI1R4GMX3 469 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 COL4A4P53420 1690 aaPredicted RBP11.69□□□□□ -0.54
RFC4-214ENST00000494047 ALPK3Q96L96 1907 aa11.69□□□□□ -0.54
RFC4-214ENST00000494047 GABRDO14764 452 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 GPR32O75388 356 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 STAMBPO95630 424 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 PENKP01210 267 aaPredicted RBP11.68□□□□□ -0.54
RFC4-214ENST00000494047 LYNP07948 512 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 ZNF286BP0CG31 522 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 PTPN1P18031 435 aaKnown RBP11.68□□□□□ -0.54
RFC4-214ENST00000494047 CST5P28325 142 aaPredicted RBP11.68□□□□□ -0.54
RFC4-214ENST00000494047 SLC26A3P40879 764 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 CPT1AP50416 773 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 CRYBB1P53674 252 aaPredicted RBP11.68□□□□□ -0.54
RFC4-214ENST00000494047 NRLP54845 237 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 GEMP55040 296 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 NKX3-2P78367 333 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 TBL3Q12788 808 aaKnown RBP11.68□□□□□ -0.54
RFC4-214ENST00000494047 MAP7Q14244 749 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 SPATS1Q496A3 300 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 PCID2Q5JVF3 399 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 BRMS1LQ5PSV4 323 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 MARCH8Q5T0T0 291 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 GJC2Q5T442 439 aaPredicted RBP11.68□□□□□ -0.54
RFC4-214ENST00000494047 AP1ARQ63HQ0 302 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 FSTL4Q6MZW2 842 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 TAF2Q6P1X5 1199 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 PGAM4Q8N0Y7 254 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 TDRD5Q8NAT2 981 aaKnown RBP11.68□□□□□ -0.54
RFC4-214ENST00000494047 PPHLN1Q8NEY8 458 aaKnown RBP11.68□□□□□ -0.54
RFC4-214ENST00000494047 ADCY4Q8NFM4 1077 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 DTX3LQ8TDB6 740 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 NRG4Q8WWG1 115 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 FATE1Q969F0 183 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 TSPAN17Q96FV3 270 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 SMARCD1Q96GM5 515 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 ASB2Q96Q27 587 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 LGMNQ99538 433 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 TRMOQ9BU70 441 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 B3GNT5Q9BYG0 378 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 TRIM4Q9C037 500 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 YIPF3Q9GZM5 350 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 KATNBL1Q9H079 304 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 OSBPL2Q9H1P3 480 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 CATSPERBQ9H7T0 1116 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 DMAP1Q9NPF5 467 aaPredicted RBP11.68□□□□□ -0.54
RFC4-214ENST00000494047 ENTPD7Q9NQZ7 604 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 C8orf4Q9NR00 106 aa11.68□□□□□ -0.54
RFC4-214ENST00000494047 FBXW11Q9UKB1 542 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms