RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 GJB7Q6PEY0 223 aa4.64□□□□□ -1.67
ITGB1-216ENST00000493758 WDR5BQ86VZ2 330 aa4.64□□□□□ -1.67
ITGB1-216ENST00000493758 VPS52Q8N1B4 723 aa4.64□□□□□ -1.67
ITGB1-216ENST00000493758 SCAIQ8N9R8 606 aa4.64□□□□□ -1.67
ITGB1-216ENST00000493758 C7orf57Q8NEG2 295 aa4.64□□□□□ -1.67
ITGB1-216ENST00000493758 ENGASEQ8NFI3 743 aa4.64□□□□□ -1.67
ITGB1-216ENST00000493758 RUBCNQ92622 972 aa4.64□□□□□ -1.67
ITGB1-216ENST00000493758 MASTLQ96GX5 879 aa4.64□□□□□ -1.67
ITGB1-216ENST00000493758 ZNF333Q96JL9 665 aa4.64□□□□□ -1.67
ITGB1-216ENST00000493758 PPP1R10Q96QC0 940 aaKnown RBP4.64□□□□□ -1.67
ITGB1-216ENST00000493758 IFT27Q9BW83 186 aa4.64□□□□□ -1.67
ITGB1-216ENST00000493758 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.64□□□□□ -1.67
ITGB1-216ENST00000493758 MRPL44Q9H9J2 332 aaKnown RBP4.64□□□□□ -1.67
ITGB1-216ENST00000493758 GRHL1Q9NZI5 618 aa4.64□□□□□ -1.67
ITGB1-216ENST00000493758 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.63□□□□□ -1.67
ITGB1-216ENST00000493758 B9A039 149 aa4.63□□□□□ -1.67
ITGB1-216ENST00000493758 H0YGN5 161 aa4.63□□□□□ -1.67
ITGB1-216ENST00000493758 KIF1CO43896 1103 aaKnown RBP4.63□□□□□ -1.67
ITGB1-216ENST00000493758 MMP3P08254 477 aa4.63□□□□□ -1.67
ITGB1-216ENST00000493758 ARSBP15848 533 aa4.63□□□□□ -1.67
ITGB1-216ENST00000493758 CHRNB2P17787 502 aa4.63□□□□□ -1.67
ITGB1-216ENST00000493758 PAPOLAP51003 745 aaKnown RBP4.63□□□□□ -1.67
ITGB1-216ENST00000493758 ZP1P60852 638 aa4.63□□□□□ -1.67
ITGB1-216ENST00000493758 ROR2Q01974 943 aaKnown RBP4.63□□□□□ -1.67
ITGB1-216ENST00000493758 PPATQ06203 517 aa4.63□□□□□ -1.67
ITGB1-216ENST00000493758 LRRC24Q50LG9 513 aa4.63□□□□□ -1.67
ITGB1-216ENST00000493758 NCAPH2Q6IBW4 605 aa4.63□□□□□ -1.67
ITGB1-216ENST00000493758 FTSJ3Q8IY81 847 aaKnown RBP4.63□□□□□ -1.67
ITGB1-216ENST00000493758 B4GALNT2Q8NHY0 566 aa4.63□□□□□ -1.67
ITGB1-216ENST00000493758 CSGALNACT1Q8TDX6 532 aa4.63□□□□□ -1.67
ITGB1-216ENST00000493758 NCSTNQ92542 709 aa4.63□□□□□ -1.67
ITGB1-216ENST00000493758 URB1-AS1Q96HZ7 61 aa4.63□□□□□ -1.67
ITGB1-216ENST00000493758 FAM167BQ9BTA0 163 aa4.63□□□□□ -1.67
ITGB1-216ENST00000493758 PLAC1Q9HBJ0 212 aa4.63□□□□□ -1.67
ITGB1-216ENST00000493758 PLK2Q9NYY3 685 aa4.63□□□□□ -1.67
ITGB1-216ENST00000493758 SELENONQ9NZV5 590 aa4.63□□□□□ -1.67
ITGB1-216ENST00000493758 HDAC6Q9UBN7 1215 aa4.63□□□□□ -1.67
ITGB1-216ENST00000493758 SEL1LQ9UBV2 794 aa4.63□□□□□ -1.67
ITGB1-216ENST00000493758 DNAJC16Q9Y2G8 782 aa4.63□□□□□ -1.67
ITGB1-216ENST00000493758 PCDHGB3Q9Y5G1 929 aa4.63□□□□□ -1.67
ITGB1-216ENST00000493758 CLEC18AA5D8T8 446 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 TNFRSF13BO14836 293 aaPredicted RBP4.62□□□□□ -1.67
ITGB1-216ENST00000493758 SYN3O14994 580 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 SPRY3O43610 288 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 HBP1O60381 514 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 KRT38O76015 456 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 SOX30O94993 753 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 LCATP04180 440 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 ALPLP05186 524 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 KLRC2P26717 231 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 EGR4Q05215 589 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 BYSLQ13895 437 aaKnown RBP4.62□□□□□ -1.67
ITGB1-216ENST00000493758 SYTL3Q4VX76 610 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 PDXDC1Q6P996 788 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 ZNF549Q6P9A3 640 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 SYNE3Q6ZMZ3 975 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 TMC8Q8IU68 726 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 LRRC57Q8N9N7 239 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 CLEC18CQ8NCF0 446 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 CMASQ8NFW8 434 aaPredicted RBP4.62□□□□□ -1.67
ITGB1-216ENST00000493758 SH3KBP1Q96B97 665 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 TBC1D20Q96BZ9 403 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 TWNKQ96RR1 684 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 KRTAP1-5Q9BYS1 174 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 ISCUQ9H1K1 167 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 CATSPERBQ9H7T0 1116 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 PCDHA7Q9UN72 937 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 ICKQ9UPZ9 632 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 GDAQ9Y2T3 454 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 GPR52Q9Y2T5 361 aa4.62□□□□□ -1.67
ITGB1-216ENST00000493758 MORC2Q9Y6X9 1032 aaPredicted RBP4.62□□□□□ -1.67
ITGB1-216ENST00000493758 A0A0A0MQY5 61 aa4.61□□□□□ -1.67
ITGB1-216ENST00000493758 RPS10-NUDT3A0A1W2PQS6 291 aa4.61□□□□□ -1.67
ITGB1-216ENST00000493758 KRTAP29-1A8MX34 341 aaPredicted RBP4.61□□□□□ -1.67
ITGB1-216ENST00000493758 PIP5K1CO60331 668 aa4.61□□□□□ -1.67
ITGB1-216ENST00000493758 GOLGA8FQ08AF8 430 aa4.61□□□□□ -1.67
ITGB1-216ENST00000493758 PPFIA1Q13136 1202 aa4.61□□□□□ -1.67
ITGB1-216ENST00000493758 ANKRD1Q15327 319 aa4.61□□□□□ -1.67
ITGB1-216ENST00000493758 WASHC2DQ5SRD0 308 aa4.61□□□□□ -1.67
ITGB1-216ENST00000493758 MAP3K21Q5TCX8 1036 aa4.61□□□□□ -1.67
ITGB1-216ENST00000493758 TMEM268Q5VZI3 342 aa4.61□□□□□ -1.67
ITGB1-216ENST00000493758 TMEM71Q6P5X7 295 aa4.61□□□□□ -1.67
ITGB1-216ENST00000493758 LDHAL6AQ6ZMR3 332 aa4.61□□□□□ -1.67
ITGB1-216ENST00000493758 SLC16A12Q6ZSM3 486 aa4.61□□□□□ -1.67
ITGB1-216ENST00000493758 SERPINA11Q86U17 422 aa4.61□□□□□ -1.67
ITGB1-216ENST00000493758 TRIM74Q86UV6 250 aa4.61□□□□□ -1.67
ITGB1-216ENST00000493758 TRIM73Q86UV7 250 aa4.61□□□□□ -1.67
ITGB1-216ENST00000493758 C2CD5Q86YS7 1000 aa4.61□□□□□ -1.67
ITGB1-216ENST00000493758 FAM217AQ8IXS0 508 aa4.61□□□□□ -1.67
ITGB1-216ENST00000493758 LINS1Q8NG48 757 aa4.61□□□□□ -1.67
ITGB1-216ENST00000493758 AFG1LQ8WV93 481 aa4.61□□□□□ -1.67
ITGB1-216ENST00000493758 RILPL2Q969X0 211 aa4.61□□□□□ -1.67
ITGB1-216ENST00000493758 MIB2Q96AX9 1013 aa4.61□□□□□ -1.67
ITGB1-216ENST00000493758 PYM1Q9BRP8 204 aaKnown RBP4.61□□□□□ -1.67
ITGB1-216ENST00000493758 NPLQ9BXD5 320 aaPredicted RBP4.61□□□□□ -1.67
ITGB1-216ENST00000493758 CHODLQ9H9P2 273 aa4.61□□□□□ -1.67
ITGB1-216ENST00000493758 NOD2Q9HC29 1040 aa4.61□□□□□ -1.67
ITGB1-216ENST00000493758 RRP7AQ9Y3A4 280 aaKnown RBP4.61□□□□□ -1.67
ITGB1-216ENST00000493758 TTC3P53804 2025 aa4.6□□□□□ -1.67
ITGB1-216ENST00000493758 OR6C68A6NDL8 312 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms