RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 STPG1Q5TH74 334 aa4.5□□□□□ -1.69
SMC4-223ENST00000493695 IL31Q6EBC2 164 aa4.5□□□□□ -1.69
SMC4-223ENST00000493695 KRTAP5-4Q6L8H1 288 aa4.5□□□□□ -1.69
SMC4-223ENST00000493695 ZNF449Q6P9G9 518 aa4.5□□□□□ -1.69
SMC4-223ENST00000493695 TRABD2AQ86V40 505 aa4.5□□□□□ -1.69
SMC4-223ENST00000493695 OR4N4Q8N0Y3 316 aa4.5□□□□□ -1.69
SMC4-223ENST00000493695 SAMD3Q8N6K7 520 aa4.5□□□□□ -1.69
SMC4-223ENST00000493695 LMNTD1Q8N9Z9 388 aa4.5□□□□□ -1.69
SMC4-223ENST00000493695 POC1AQ8NBT0 407 aa4.5□□□□□ -1.69
SMC4-223ENST00000493695 FAM110DQ8TAY7 271 aaPredicted RBP4.5□□□□□ -1.69
SMC4-223ENST00000493695 NEK9Q8TD19 979 aa4.5□□□□□ -1.69
SMC4-223ENST00000493695 KLHL31Q9H511 634 aa4.5□□□□□ -1.69
SMC4-223ENST00000493695 DTNAQ9Y4J8 743 aa4.5□□□□□ -1.69
SMC4-223ENST00000493695 CYP3A7-CYP3A51PA0A087WV96 503 aa4.49□□□□□ -1.69
SMC4-223ENST00000493695 BMPR1BO00238 502 aa4.49□□□□□ -1.69
SMC4-223ENST00000493695 RPP40O75818 363 aaKnown RBP4.49□□□□□ -1.69
SMC4-223ENST00000493695 ANXA6P08133 673 aa4.49□□□□□ -1.69
SMC4-223ENST00000493695 NBPF7P0C2Y1 421 aaPredicted RBP4.49□□□□□ -1.69
SMC4-223ENST00000493695 CYP3A7P24462 503 aa4.49□□□□□ -1.69
SMC4-223ENST00000493695 RFC1P35251 1148 aaPredicted RBP4.49□□□□□ -1.69
SMC4-223ENST00000493695 NEK3P51956 506 aa4.49□□□□□ -1.69
SMC4-223ENST00000493695 ST3GAL1Q11201 340 aa4.49□□□□□ -1.69
SMC4-223ENST00000493695 IFIT5Q13325 482 aaKnown RBP4.49□□□□□ -1.69
SMC4-223ENST00000493695 SNTA1Q13424 505 aa4.49□□□□□ -1.69
SMC4-223ENST00000493695 HDAC1Q13547 482 aaPredicted RBP4.49□□□□□ -1.69
SMC4-223ENST00000493695 SYCP2LQ5T4T6 812 aa4.49□□□□□ -1.69
SMC4-223ENST00000493695 HIBCHQ6NVY1 386 aaPredicted RBP4.49□□□□□ -1.69
SMC4-223ENST00000493695 MEX3BQ6ZN04 569 aaKnown RBP4.49□□□□□ -1.69
SMC4-223ENST00000493695 DPP9Q86TI2 863 aa4.49□□□□□ -1.69
SMC4-223ENST00000493695 EXOC3L1Q86VI1 746 aa4.49□□□□□ -1.69
SMC4-223ENST00000493695 COLEC11Q9BWP8 271 aa4.49□□□□□ -1.69
SMC4-223ENST00000493695 ANTXRLA6NF34 631 aa4.48□□□□□ -1.69
SMC4-223ENST00000493695 KDM4EB2RXH2 506 aaPredicted RBP4.48□□□□□ -1.69
SMC4-223ENST00000493695 EYA2O00167 538 aa4.48□□□□□ -1.69
SMC4-223ENST00000493695 CYP3A4P08684 503 aa4.48□□□□□ -1.69
SMC4-223ENST00000493695 UNGP13051 313 aaPredicted RBP4.48□□□□□ -1.69
SMC4-223ENST00000493695 KLRK1P26718 216 aa4.48□□□□□ -1.69
SMC4-223ENST00000493695 PEX5P50542 639 aa4.48□□□□□ -1.69
SMC4-223ENST00000493695 AK2P54819 239 aa4.48□□□□□ -1.69
SMC4-223ENST00000493695 FAM3BP58499 235 aaPredicted RBP4.48□□□□□ -1.69
SMC4-223ENST00000493695 RHBDL3P58872 404 aa4.48□□□□□ -1.69
SMC4-223ENST00000493695 RBM6P78332 1123 aaKnown RBP4.48□□□□□ -1.69
SMC4-223ENST00000493695 C5orf22Q49AR2 442 aa4.48□□□□□ -1.69
SMC4-223ENST00000493695 TYW3Q6IPR3 259 aaKnown RBP4.48□□□□□ -1.69
SMC4-223ENST00000493695 SLC25A33Q9BSK2 321 aa4.48□□□□□ -1.69
SMC4-223ENST00000493695 FRMD8Q9BZ67 464 aaPredicted RBP4.48□□□□□ -1.69
SMC4-223ENST00000493695 STARD7Q9NQZ5 370 aa4.48□□□□□ -1.69
SMC4-223ENST00000493695 ZDHHC7Q9NXF8 308 aa4.48□□□□□ -1.69
SMC4-223ENST00000493695 ZBTB1Q9Y2K1 713 aa4.48□□□□□ -1.69
SMC4-223ENST00000493695 PCDHAC2Q9Y5I4 1007 aa4.48□□□□□ -1.69
SMC4-223ENST00000493695 IGLV5-52A0A0A0MRZ9 124 aa4.47□□□□□ -1.69
SMC4-223ENST00000493695 RASA4BC9J798 803 aa4.47□□□□□ -1.69
SMC4-223ENST00000493695 PCDH17O14917 1159 aa4.47□□□□□ -1.69
SMC4-223ENST00000493695 RASA4O43374 803 aa4.47□□□□□ -1.69
SMC4-223ENST00000493695 NTSR2O95665 410 aa4.47□□□□□ -1.69
SMC4-223ENST00000493695 AMD1P17707 334 aa4.47□□□□□ -1.69
SMC4-223ENST00000493695 OAZ1P54368 228 aa4.47□□□□□ -1.69
SMC4-223ENST00000493695 TOGARAM2Q6ZUX3 1019 aa4.47□□□□□ -1.69
SMC4-223ENST00000493695 IL17FQ96PD4 163 aa4.47□□□□□ -1.69
SMC4-223ENST00000493695 PKP4Q99569 1192 aa4.47□□□□□ -1.69
SMC4-223ENST00000493695 ELAC2Q9BQ52 826 aaKnown RBP4.47□□□□□ -1.69
SMC4-223ENST00000493695 IFT27Q9BW83 186 aa4.47□□□□□ -1.69
SMC4-223ENST00000493695 KRTAP4-4Q9BYR3 166 aa4.47□□□□□ -1.69
SMC4-223ENST00000493695 LHPPQ9H008 270 aa4.47□□□□□ -1.69
SMC4-223ENST00000493695 IL25Q9H293 177 aa4.47□□□□□ -1.69
SMC4-223ENST00000493695 PKP3Q9Y446 797 aa4.47□□□□□ -1.69
SMC4-223ENST00000493695 AGAP5A6NIR3 686 aa4.46□□□□□ -1.7
SMC4-223ENST00000493695 ERI2A8K979 691 aaKnown RBP4.46□□□□□ -1.7
SMC4-223ENST00000493695 GLP2RO95838 553 aa4.46□□□□□ -1.7
SMC4-223ENST00000493695 ENO3P13929 434 aaPredicted RBP4.46□□□□□ -1.7
SMC4-223ENST00000493695 GNLYP22749 145 aa4.46□□□□□ -1.7
SMC4-223ENST00000493695 GSTM2P28161 218 aa4.46□□□□□ -1.7
SMC4-223ENST00000493695 BNC1Q01954 994 aa4.46□□□□□ -1.7
SMC4-223ENST00000493695 MYBPHQ13203 477 aa4.46□□□□□ -1.7
SMC4-223ENST00000493695 PLEKHO1Q53GL0 409 aaPredicted RBP4.46□□□□□ -1.7
SMC4-223ENST00000493695 EFHC1Q5JVL4 640 aa4.46□□□□□ -1.7
SMC4-223ENST00000493695 FAM209BQ5JX69 171 aa4.46□□□□□ -1.7
SMC4-223ENST00000493695 ARL6IP4Q66PJ3 421 aaKnown RBP4.46□□□□□ -1.7
SMC4-223ENST00000493695 DCUN1D3Q8IWE4 304 aa4.46□□□□□ -1.7
SMC4-223ENST00000493695 NRSN1Q8IZ57 195 aa4.46□□□□□ -1.7
SMC4-223ENST00000493695 VPS52Q8N1B4 723 aa4.46□□□□□ -1.7
SMC4-223ENST00000493695 OR2C3Q8N628 320 aa4.46□□□□□ -1.7
SMC4-223ENST00000493695 HMGB4Q8WW32 186 aa4.46□□□□□ -1.7
SMC4-223ENST00000493695 BRI3BPQ8WY22 251 aa4.46□□□□□ -1.7
SMC4-223ENST00000493695 SGCZQ96LD1 299 aa4.46□□□□□ -1.7
SMC4-223ENST00000493695 MECRQ9BV79 373 aa4.46□□□□□ -1.7
SMC4-223ENST00000493695 FNIP2Q9P278 1114 aa4.46□□□□□ -1.7
SMC4-223ENST00000493695 NFU1Q9UMS0 254 aa4.46□□□□□ -1.7
SMC4-223ENST00000493695 HSPB6O14558 160 aa4.45□□□□□ -1.7
SMC4-223ENST00000493695 MYZAPP0CAP1 466 aa4.45□□□□□ -1.7
SMC4-223ENST00000493695 HOXB9P17482 250 aaPredicted RBP4.45□□□□□ -1.7
SMC4-223ENST00000493695 EEF1GP26641 437 aaKnown RBP4.45□□□□□ -1.7
SMC4-223ENST00000493695 SERPINB3P29508 390 aa4.45□□□□□ -1.7
SMC4-223ENST00000493695 SF3A3Q12874 501 aaKnown RBP eCLIP4.45□□□□□ -1.7
SMC4-223ENST00000493695 MORC3Q14149 939 aa4.45□□□□□ -1.7
SMC4-223ENST00000493695 RBM39Q14498 530 aaKnown RBP4.45□□□□□ -1.7
SMC4-223ENST00000493695 LONRF1Q17RB8 773 aa4.45□□□□□ -1.7
SMC4-223ENST00000493695 SLC35G1Q2M3R5 365 aa4.45□□□□□ -1.7
SMC4-223ENST00000493695 PLK5Q496M5 336 aa4.45□□□□□ -1.7
SMC4-223ENST00000493695 PMS2CLQ68D20 193 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms