RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 SLC44A1Q8WWI5 657 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 MARC2Q969Z3 335 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 FAM149B1Q96BN6 582 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 ARHGEF26Q96DR7 871 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 PPP1R2P1Q96PQ5 205 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 PKP2Q99959 881 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 PRRG3Q9BZD7 231 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 ACP6Q9NPH0 428 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 CD274Q9NZQ7 290 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 PSMC3IPQ9P2W1 217 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-205ENST00000493587 PCYOX1Q9UHG3 505 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 SPATA2Q9UM82 520 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 SLC45A1Q9Y2W3 748 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 RNF11Q9Y3C5 154 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 ATRNL1Q5VV63 1379 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 SF3B1O75533 1304 aaKnown RBP eCLIP6.97□□□□□ -1.29
VPS13B-205ENST00000493587 PNMA6FA0A0J9YX94 578 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 PRSS44E7EML9 344 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 KPNA6O60684 536 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 RGS20O76081 388 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 SLC4A1P02730 911 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 DLDP09622 509 aaKnown RBP6.97□□□□□ -1.29
VPS13B-205ENST00000493587 VEGFAP15692 232 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-205ENST00000493587 CTBSQ01459 385 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 ENPEPQ07075 957 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 BNIP2Q12982 314 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 SP140Q13342 867 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 LAPTM5Q13571 262 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 AASDHQ4L235 1098 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-205ENST00000493587 DCAF12L1Q5VU92 463 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 SLX4IPQ5VYV7 408 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 IZUMO3Q5VZ72 239 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 ZNF772Q68DY9 489 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-205ENST00000493587 ZBTB49Q6ZSB9 765 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 KIAA0408Q6ZU52 694 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 CHST15Q7LFX5 561 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-205ENST00000493587 ZNF677Q86XU0 584 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 CCDC60Q8IWA6 550 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-205ENST00000493587 SIMC1Q8NDZ2 872 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 BHLHE22Q8NFJ8 381 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-205ENST00000493587 ZSCAN18Q8TBC5 510 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-205ENST00000493587 RFFLQ8WZ73 363 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 GTF2H4Q92759 462 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 SYN2Q92777 582 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-205ENST00000493587 SNX18Q96RF0 628 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 CAMKK2Q96RR4 588 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 REXO4Q9GZR2 422 aaKnown RBP6.97□□□□□ -1.29
VPS13B-205ENST00000493587 COQ10BQ9H8M1 238 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 KCNK4Q9NYG8 393 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 WHRNQ9P202 907 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 RAD54BQ9Y620 910 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 RNF103-CHMP3A0A140T963 221 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 TBX1O43435 398 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 GAS2O43903 313 aaKnown RBP6.97□□□□□ -1.29
VPS13B-205ENST00000493587 TDP2O95551 362 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 PGK2P07205 417 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 CHRNB2P17787 502 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 SERPINB10P48595 397 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 ARHGDIBP52566 201 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 AP2S1P53680 142 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-205ENST00000493587 ATN1P54259 1190 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-205ENST00000493587 PFKFB3Q16875 520 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-205ENST00000493587 DCAF17Q5H9S7 520 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-205ENST00000493587 TRIM72Q6ZMU5 477 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 CARNMT1Q8N4J0 409 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 PDPRQ8NCN5 879 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 EPS8L1Q8TE68 723 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 ATG4AQ8WYN0 398 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 POMGNT1Q8WZA1 660 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 SH3KBP1Q96B97 665 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 SECISBP2Q96T21 854 aaKnown RBP6.97□□□□□ -1.29
VPS13B-205ENST00000493587 RNF26Q9BY78 433 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-205ENST00000493587 COPG2Q9UBF2 871 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 MTRRQ9UBK8 725 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 NXF1Q9UBU9 619 aaKnown RBP6.97□□□□□ -1.29
VPS13B-205ENST00000493587 ENOPH1Q9UHY7 261 aa6.97□□□□□ -1.29
VPS13B-205ENST00000493587 CYP2D7A0A087X1C5 515 aa6.96□□□□□ -1.29
VPS13B-205ENST00000493587 ESYT2A0FGR8 921 aa6.96□□□□□ -1.29
VPS13B-205ENST00000493587 H0Y858 1186 aa6.96□□□□□ -1.29
VPS13B-205ENST00000493587 PGRP06401 933 aa6.96□□□□□ -1.29
VPS13B-205ENST00000493587 TNFAIP3P21580 790 aa6.96□□□□□ -1.29
VPS13B-205ENST00000493587 TGM1P22735 817 aa6.96□□□□□ -1.29
VPS13B-205ENST00000493587 TBXAS1P24557 533 aaPredicted RBP6.96□□□□□ -1.29
VPS13B-205ENST00000493587 EPHA3P29320 983 aa6.96□□□□□ -1.29
VPS13B-205ENST00000493587 IL12AP29459 219 aa6.96□□□□□ -1.29
VPS13B-205ENST00000493587 HIBADHP31937 336 aaKnown RBP6.96□□□□□ -1.29
VPS13B-205ENST00000493587 CCT3P49368 545 aaKnown RBP6.96□□□□□ -1.29
VPS13B-205ENST00000493587 PKNOX1P55347 436 aa6.96□□□□□ -1.29
VPS13B-205ENST00000493587 VBP1P61758 197 aa6.96□□□□□ -1.29
VPS13B-205ENST00000493587 LSM3P62310 102 aaKnown RBP6.96□□□□□ -1.29
VPS13B-205ENST00000493587 TOR2AQ5JU69 321 aa6.96□□□□□ -1.29
VPS13B-205ENST00000493587 GLYCTKQ8IVS8 523 aa6.96□□□□□ -1.29
VPS13B-205ENST00000493587 SHCBP1Q8NEM2 672 aa6.96□□□□□ -1.29
VPS13B-205ENST00000493587 LHFPL5Q8TAF8 219 aa6.96□□□□□ -1.29
VPS13B-205ENST00000493587 USP13Q92995 863 aaPredicted RBP6.96□□□□□ -1.29
VPS13B-205ENST00000493587 SGK3Q96BR1 496 aa6.96□□□□□ -1.29
VPS13B-205ENST00000493587 LRRC39Q96DD0 335 aa6.96□□□□□ -1.29
VPS13B-205ENST00000493587 TSEN34Q9BSV6 310 aaKnown RBP6.96□□□□□ -1.29
VPS13B-205ENST00000493587 VPS11Q9H270 941 aa6.96□□□□□ -1.29
VPS13B-205ENST00000493587 SEMA6BQ9H3T3 888 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms