RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 WASH3PC4AMC7 463 aa16.07■□□□□ 0.16
HPS4-216ENST00000493455 M0R296 226 aa16.07■□□□□ 0.16
HPS4-216ENST00000493455 PRAMEF11O60813 436 aa16.07■□□□□ 0.16
HPS4-216ENST00000493455 MT-CO1P00395 513 aa16.07■□□□□ 0.16
HPS4-216ENST00000493455 NNMTP40261 264 aa16.07■□□□□ 0.16
HPS4-216ENST00000493455 NR2C2P49116 596 aa16.07■□□□□ 0.16
HPS4-216ENST00000493455 KLF1Q13351 362 aaPredicted RBP16.07■□□□□ 0.16
HPS4-216ENST00000493455 CCINQ13939 588 aa16.07■□□□□ 0.16
HPS4-216ENST00000493455 PTPRNQ16849 979 aa16.07■□□□□ 0.16
HPS4-216ENST00000493455 DGKKQ5KSL6 1271 aa16.07■□□□□ 0.16
HPS4-216ENST00000493455 DARS2Q6PI48 645 aaKnown RBP16.07■□□□□ 0.16
HPS4-216ENST00000493455 CCDC13Q8IYE1 715 aa16.07■□□□□ 0.16
HPS4-216ENST00000493455 RASGEF1CQ8N431 466 aa16.07■□□□□ 0.16
HPS4-216ENST00000493455 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.07■□□□□ 0.16
HPS4-216ENST00000493455 ALLCQ8N6M5 410 aa16.07■□□□□ 0.16
HPS4-216ENST00000493455 TTC13Q8NBP0 860 aa16.07■□□□□ 0.16
HPS4-216ENST00000493455 TFB1MQ8WVM0 346 aaKnown RBP16.07■□□□□ 0.16
HPS4-216ENST00000493455 MAIP1Q8WWC4 291 aa16.07■□□□□ 0.16
HPS4-216ENST00000493455 ACDQ96AP0 544 aa16.07■□□□□ 0.16
HPS4-216ENST00000493455 CEP41Q9BYV8 373 aa16.07■□□□□ 0.16
HPS4-216ENST00000493455 MTG2Q9H4K7 406 aa16.07■□□□□ 0.16
HPS4-216ENST00000493455 SLCO3A1Q9UIG8 710 aa16.07■□□□□ 0.16
HPS4-216ENST00000493455 RAD54BQ9Y620 910 aa16.07■□□□□ 0.16
HPS4-216ENST00000493455 TTC34A8MYJ7 566 aa16.06■□□□□ 0.16
HPS4-216ENST00000493455 NCAM2O15394 837 aa16.06■□□□□ 0.16
HPS4-216ENST00000493455 TIMM44O43615 452 aa16.06■□□□□ 0.16
HPS4-216ENST00000493455 MAFKO60675 156 aa16.06■□□□□ 0.16
HPS4-216ENST00000493455 ZMPSTE24O75844 475 aa16.06■□□□□ 0.16
HPS4-216ENST00000493455 DCNP07585 359 aaKnown RBP16.06■□□□□ 0.16
HPS4-216ENST00000493455 RBP3P10745 1247 aa16.06■□□□□ 0.16
HPS4-216ENST00000493455 CHRNB1P11230 501 aa16.06■□□□□ 0.16
HPS4-216ENST00000493455 SRCP12931 536 aa16.06■□□□□ 0.16
HPS4-216ENST00000493455 IL12RB1P42701 662 aa16.06■□□□□ 0.16
HPS4-216ENST00000493455 PAFAH1B1P43034 410 aa16.06■□□□□ 0.16
HPS4-216ENST00000493455 IL10RBQ08334 325 aa16.06■□□□□ 0.16
HPS4-216ENST00000493455 ZNF235Q14590 738 aa16.06■□□□□ 0.16
HPS4-216ENST00000493455 FBXO43Q4G163 708 aa16.06■□□□□ 0.16
HPS4-216ENST00000493455 SDE2Q6IQ49 451 aa16.06■□□□□ 0.16
HPS4-216ENST00000493455 TIGD7Q6NT04 549 aaPredicted RBP16.06■□□□□ 0.16
HPS4-216ENST00000493455 CDKL3Q8IVW4 592 aaPredicted RBP16.06■□□□□ 0.16
HPS4-216ENST00000493455 RYBPQ8N488 228 aaPredicted RBP16.06■□□□□ 0.16
HPS4-216ENST00000493455 TXNDC5Q8NBS9 432 aaKnown RBP16.06■□□□□ 0.16
HPS4-216ENST00000493455 PJA1Q8NG27 643 aa16.06■□□□□ 0.16
HPS4-216ENST00000493455 KIF18AQ8NI77 898 aa16.06■□□□□ 0.16
HPS4-216ENST00000493455 HDAC11Q96DB2 347 aa16.06■□□□□ 0.16
HPS4-216ENST00000493455 EXOC2Q96KP1 924 aa16.06■□□□□ 0.16
HPS4-216ENST00000493455 MRGPRX3Q96LB0 322 aa16.06■□□□□ 0.16
HPS4-216ENST00000493455 OLFM3Q96PB7 478 aa16.06■□□□□ 0.16
HPS4-216ENST00000493455 NAP1L3Q99457 506 aaPredicted RBP16.06■□□□□ 0.16
HPS4-216ENST00000493455 CINPQ9BW66 212 aaPredicted RBP16.06■□□□□ 0.16
HPS4-216ENST00000493455 TNKS2Q9H2K2 1166 aa16.06■□□□□ 0.16
HPS4-216ENST00000493455 THAP10Q9P2Z0 257 aaPredicted RBP16.06■□□□□ 0.16
HPS4-216ENST00000493455 HCN2Q9UL51 889 aa16.06■□□□□ 0.16
HPS4-216ENST00000493455 TECTAO75443 2155 aa16.06■□□□□ 0.16
HPS4-216ENST00000493455 A0A0A0MRY4 1105 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 ZSCAN5CA6NGD5 496 aaPredicted RBP16.05■□□□□ 0.16
HPS4-216ENST00000493455 KCNK1O00180 336 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 KRIT1O00522 736 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 CES2O00748 559 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 SMAD6O43541 496 aaKnown RBP16.05■□□□□ 0.16
HPS4-216ENST00000493455 TMCC1O94876 653 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 TUBB4AP04350 444 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 EPHX1P07099 455 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 SRPRAP08240 638 aaKnown RBP16.05■□□□□ 0.16
HPS4-216ENST00000493455 VAV1P15498 845 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 PRLRP16471 622 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 PRKCHP24723 683 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 CCNCP24863 283 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 KIR2DL1P43626 348 aaPredicted RBP16.05■□□□□ 0.16
HPS4-216ENST00000493455 SERPINH1P50454 418 aaKnown RBP16.05■□□□□ 0.16
HPS4-216ENST00000493455 GEMIN4P57678 1058 aaKnown RBP16.05■□□□□ 0.16
HPS4-216ENST00000493455 RHOAP61586 193 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 PPIDQ08752 370 aaKnown RBP16.05■□□□□ 0.16
HPS4-216ENST00000493455 ITKQ08881 620 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 LBRQ14739 615 aaKnown RBP16.05■□□□□ 0.16
HPS4-216ENST00000493455 DLG2Q15700 870 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 HEATR6Q6AI08 1181 aaKnown RBP16.05■□□□□ 0.16
HPS4-216ENST00000493455 C22orf39Q6P5X5 142 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 PKN3Q6P5Z2 889 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 CCDC105Q8IYK2 499 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 SH2D3CQ8N5H7 860 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 ACTRT1Q8TDG2 376 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 CCDC114Q96M63 670 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 QKIQ96PU8 341 aaKnown RBP eCLIP16.05■□□□□ 0.16
HPS4-216ENST00000493455 NELL2Q99435 816 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 COL25A1Q9BXS0 654 aaPredicted RBP16.05■□□□□ 0.16
HPS4-216ENST00000493455 TM6SF2Q9BZW4 377 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 EPHX3Q9H6B9 360 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 PDFQ9HBH1 243 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 POLR3BQ9NW08 1133 aaPredicted RBP16.05■□□□□ 0.16
HPS4-216ENST00000493455 DNPEPQ9ULA0 475 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 SLC8A2Q9UPR5 921 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 SIT1Q9Y3P8 196 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 STON1Q9Y6Q2 735 aa16.05■□□□□ 0.16
HPS4-216ENST00000493455 GOLGA6L10A0A0M3HER8 536 aa16.04■□□□□ 0.16
HPS4-216ENST00000493455 FAM86C2PA6NEL3 165 aa16.04■□□□□ 0.16
HPS4-216ENST00000493455 F5H423 210 aaPredicted RBP16.04■□□□□ 0.16
HPS4-216ENST00000493455 TNFRSF10AO00220 468 aa16.04■□□□□ 0.16
HPS4-216ENST00000493455 KCNN4O15554 427 aa16.04■□□□□ 0.16
HPS4-216ENST00000493455 CD160O95971 181 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms