RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 PCDHA7Q9UN72 937 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 ZNF541Q9H0D2 1346 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 SIPA1L1O43166 1804 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 FOCADQ5VW36 1801 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 BAZ2AQ9UIF9 1905 aaKnown RBP3.62□□□□□ -1.83
PTCD3-218ENST00000493430 DPPA5A6NC42 116 aa3.62□□□□□ -1.83
PTCD3-218ENST00000493430 TNFRSF13BO14836 293 aaPredicted RBP3.62□□□□□ -1.83
PTCD3-218ENST00000493430 KRT86O43790 486 aa3.62□□□□□ -1.83
PTCD3-218ENST00000493430 HSP90AB1P08238 724 aaKnown RBP3.62□□□□□ -1.83
PTCD3-218ENST00000493430 ARP10275 920 aa3.62□□□□□ -1.83
PTCD3-218ENST00000493430 SLC8A1P32418 973 aa3.62□□□□□ -1.83
PTCD3-218ENST00000493430 MLH1P40692 756 aa3.62□□□□□ -1.83
PTCD3-218ENST00000493430 AGTR2P50052 363 aa3.62□□□□□ -1.83
PTCD3-218ENST00000493430 EIF5P55010 431 aaKnown RBP3.62□□□□□ -1.83
PTCD3-218ENST00000493430 C1QTNF8P60827 252 aa3.62□□□□□ -1.83
PTCD3-218ENST00000493430 DMWDQ09019 674 aa3.62□□□□□ -1.83
PTCD3-218ENST00000493430 AIMP1Q12904 312 aaKnown RBP3.62□□□□□ -1.83
PTCD3-218ENST00000493430 KRT81Q14533 505 aa3.62□□□□□ -1.83
PTCD3-218ENST00000493430 ANXA2RQ3ZCQ2 193 aa3.62□□□□□ -1.83
PTCD3-218ENST00000493430 TMEM196Q5HYL7 178 aa3.62□□□□□ -1.83
PTCD3-218ENST00000493430 C6orf10Q5SRN2 563 aa3.62□□□□□ -1.83
PTCD3-218ENST00000493430 FAXCQ5TGI0 409 aa3.62□□□□□ -1.83
PTCD3-218ENST00000493430 RRAGBQ5VZM2 374 aa3.62□□□□□ -1.83
PTCD3-218ENST00000493430 ISM2Q6H9L7 571 aa3.62□□□□□ -1.83
PTCD3-218ENST00000493430 CAPRIN2Q6IMN6 1127 aaKnown RBP3.62□□□□□ -1.83
PTCD3-218ENST00000493430 ACSM6Q6P461 480 aa3.62□□□□□ -1.83
PTCD3-218ENST00000493430 TLDC1Q6P9B6 456 aa3.62□□□□□ -1.83
PTCD3-218ENST00000493430 RHPN2Q8IUC4 686 aa3.62□□□□□ -1.83
PTCD3-218ENST00000493430 FAM47BQ8NA70 645 aa3.62□□□□□ -1.83
PTCD3-218ENST00000493430 ASB12Q8WXK4 309 aa3.62□□□□□ -1.83
PTCD3-218ENST00000493430 CENPIQ92674 756 aaPredicted RBP3.62□□□□□ -1.83
PTCD3-218ENST00000493430 ATP2A3Q93084 1043 aa3.62□□□□□ -1.83
PTCD3-218ENST00000493430 TSR2Q969E8 191 aaKnown RBP3.62□□□□□ -1.83
PTCD3-218ENST00000493430 ZNF622Q969S3 477 aaKnown RBP eCLIP3.62□□□□□ -1.839e-19■■□□□ 11.8
PTCD3-218ENST00000493430 MIB2Q96AX9 1013 aa3.62□□□□□ -1.83
PTCD3-218ENST00000493430 WDR83Q9BRX9 315 aaKnown RBP3.62□□□□□ -1.83
PTCD3-218ENST00000493430 NUP62CLQ9H1M0 184 aa3.62□□□□□ -1.83
PTCD3-218ENST00000493430 NARFQ9UHQ1 456 aa3.62□□□□□ -1.83
PTCD3-218ENST00000493430 UTS2RQ9UKP6 389 aa3.62□□□□□ -1.83
PTCD3-218ENST00000493430 SNX13Q9Y5W8 968 aa3.62□□□□□ -1.83
PTCD3-218ENST00000493430 DOCK3Q8IZD9 2030 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 GOLGA6CA6NDK9 693 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 GOLGA6BA6NDN3 693 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 H0YGN5 161 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 ACOT8O14734 319 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 AREL1O15033 823 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 ZSCAN9O15535 394 aaPredicted RBP3.61□□□□□ -1.83
PTCD3-218ENST00000493430 IL18RAPO95256 599 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 GOLGA6DP0CG33 693 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 PLA2G2AP14555 144 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 TMPOP42166 694 aaKnown RBP3.61□□□□□ -1.83
PTCD3-218ENST00000493430 STAT6P42226 847 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 GSTM5P46439 218 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 SEMA5AQ13591 1074 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 PGM5Q15124 567 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 ODF3L2Q3SX64 289 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 ZNF324BQ6AW86 544 aaPredicted RBP3.61□□□□□ -1.83
PTCD3-218ENST00000493430 TTLL5Q6EMB2 1281 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 CRTC1Q6UUV9 634 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 SPATA2LQ8IUW3 424 aaPredicted RBP3.61□□□□□ -1.83
PTCD3-218ENST00000493430 LAS2Q8IYD9 372 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 CLASRPQ8N2M8 674 aaKnown RBP3.61□□□□□ -1.83
PTCD3-218ENST00000493430 TMEM174Q8WUU8 243 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 NUDCD2Q8WVJ2 157 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 GLMPQ8WWB7 406 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 OIT3Q8WWZ8 545 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 NEUROG1Q92886 237 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 EME1Q96AY2 570 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 MED30Q96HR3 178 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 CFAP53Q96M91 514 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 TASP1Q9H6P5 420 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 AAMDCQ9H7C9 122 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 PNPLA8Q9NP80 782 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 TXLNGQ9NUQ3 528 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 HIF1ANQ9NWT6 349 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 GOLGA6AQ9NYA3 693 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 CHPF2Q9P2E5 772 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 MYH1P12882 1939 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 ALPK3Q96L96 1907 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 FRMPD2Q68DX3 1309 aaPredicted RBP3.61□□□□□ -1.83
PTCD3-218ENST00000493430 MAPK8IP3Q9UPT6 1336 aa3.61□□□□□ -1.83
PTCD3-218ENST00000493430 FRMPD3Q5JV73 1810 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 A0A087WZ62 844 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 A6NNC1 897 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 APAF1O14727 1248 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 CHRNB1P11230 501 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 CIITAP33076 1130 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 RIPK4P57078 832 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 GAD2Q05329 585 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 LTBQ06643 244 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 DAG1Q14118 895 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 GRM3Q14832 879 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 NFATC4Q14934 902 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 SUSD4Q5VX71 490 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 MRNIPQ6NTE8 343 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 CCDC144NLQ6NUI1 221 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 USP17L6PQ6QN14 398 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 ZNF474Q6S9Z5 364 aaPredicted RBP3.6□□□□□ -1.83
PTCD3-218ENST00000493430 G2E3Q7L622 706 aa3.6□□□□□ -1.83
PTCD3-218ENST00000493430 TSPYL6Q8N831 410 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms