RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 KIF18AQ8NI77 898 aa17.56■□□□□ 0.4
LIME1-208ENST00000493265 ATG4AQ8WYN0 398 aa17.56■□□□□ 0.4
LIME1-208ENST00000493265 MSANTD3Q96H12 275 aa17.56■□□□□ 0.4
LIME1-208ENST00000493265 SHDQ96IW2 340 aa17.56■□□□□ 0.4
LIME1-208ENST00000493265 LGMNQ99538 433 aa17.56■□□□□ 0.4
LIME1-208ENST00000493265 ACE2Q9BYF1 805 aaPredicted RBP17.56■□□□□ 0.4
LIME1-208ENST00000493265 C10orf88Q9H8K7 445 aa17.56■□□□□ 0.4
LIME1-208ENST00000493265 ELOVL2Q9NXB9 296 aa17.56■□□□□ 0.4
LIME1-208ENST00000493265 SEPT10Q9P0V9 454 aa17.56■□□□□ 0.4
LIME1-208ENST00000493265 IPO11Q9UI26 975 aaKnown RBP17.56■□□□□ 0.4
LIME1-208ENST00000493265 R4GN57 208 aa17.56■□□□□ 0.4
LIME1-208ENST00000493265 DCHS1Q96JQ0 3298 aa17.56■□□□□ 0.4
LIME1-208ENST00000493265 NYNRINQ9P2P1 1898 aaKnown RBP17.55■□□□□ 0.4
LIME1-208ENST00000493265 SHISA7A6NL88 538 aa17.55■□□□□ 0.4
LIME1-208ENST00000493265 CES2O00748 559 aa17.55■□□□□ 0.4
LIME1-208ENST00000493265 KDELR3O43731 214 aa17.55■□□□□ 0.4
LIME1-208ENST00000493265 DCNP07585 359 aaKnown RBP17.55■□□□□ 0.4
LIME1-208ENST00000493265 MX2P20592 715 aa17.55■□□□□ 0.4
LIME1-208ENST00000493265 GARSP41250 739 aaKnown RBP17.55■□□□□ 0.4
LIME1-208ENST00000493265 STK19P49842 368 aaPredicted RBP17.55■□□□□ 0.4
LIME1-208ENST00000493265 PLK1P53350 603 aa17.55■□□□□ 0.4
LIME1-208ENST00000493265 EIF3EP60228 445 aaKnown RBP17.55■□□□□ 0.4
LIME1-208ENST00000493265 ECT2LQ008S8 904 aa17.55■□□□□ 0.4
LIME1-208ENST00000493265 PDK1Q15118 436 aa17.55■□□□□ 0.4
LIME1-208ENST00000493265 NOMO1Q15155 1222 aa17.55■□□□□ 0.4
LIME1-208ENST00000493265 FAM182AQ5T1J6 154 aa17.55■□□□□ 0.4
LIME1-208ENST00000493265 DCAF4L2Q8NA75 395 aa17.55■□□□□ 0.4
LIME1-208ENST00000493265 MAIP1Q8WWC4 291 aa17.55■□□□□ 0.4
LIME1-208ENST00000493265 EZH1Q92800 747 aaPredicted RBP17.55■□□□□ 0.4
LIME1-208ENST00000493265 FOXQ1Q9C009 403 aa17.55■□□□□ 0.4
LIME1-208ENST00000493265 RBM12Q9NTZ6 932 aaKnown RBP17.55■□□□□ 0.4
LIME1-208ENST00000493265 SLC25A13Q9UJS0 675 aa17.55■□□□□ 0.4
LIME1-208ENST00000493265 ZNF292O60281 2723 aa17.55■□□□□ 0.4
LIME1-208ENST00000493265 K7EQS6 105 aa17.54■□□□□ 0.4
LIME1-208ENST00000493265 KRIT1O00522 736 aa17.54■□□□□ 0.4
LIME1-208ENST00000493265 PPP1R12AO14974 1030 aaPredicted RBP17.54■□□□□ 0.4
LIME1-208ENST00000493265 MCF2LO15068 1137 aa17.54■□□□□ 0.4
LIME1-208ENST00000493265 ATP5BP06576 529 aaKnown RBP17.54■□□□□ 0.4
LIME1-208ENST00000493265 DRD1P21728 446 aa17.54■□□□□ 0.4
LIME1-208ENST00000493265 TIE1P35590 1138 aa17.54■□□□□ 0.4
LIME1-208ENST00000493265 PAFAH1B1P43034 410 aa17.54■□□□□ 0.4
LIME1-208ENST00000493265 FNDC3BQ53EP0 1204 aaKnown RBP17.54■□□□□ 0.4
LIME1-208ENST00000493265 C2orf27AQ580R0 203 aa17.54■□□□□ 0.4
LIME1-208ENST00000493265 DARS2Q6PI48 645 aaKnown RBP17.54■□□□□ 0.4
LIME1-208ENST00000493265 BZW1Q7L1Q6 419 aaKnown RBP17.54■□□□□ 0.4
LIME1-208ENST00000493265 CREG2Q8IUH2 290 aa17.54■□□□□ 0.4
LIME1-208ENST00000493265 TTC13Q8NBP0 860 aa17.54■□□□□ 0.4
LIME1-208ENST00000493265 ACTRT1Q8TDG2 376 aa17.54■□□□□ 0.4
LIME1-208ENST00000493265 USP33Q8TEY7 942 aa17.54■□□□□ 0.4
LIME1-208ENST00000493265 UCMAQ8WVF2 138 aa17.54■□□□□ 0.4
LIME1-208ENST00000493265 TTC17Q96AE7 1141 aa17.54■□□□□ 0.4
LIME1-208ENST00000493265 ERLEC1Q96DZ1 483 aa17.54■□□□□ 0.4
LIME1-208ENST00000493265 OLFM3Q96PB7 478 aa17.54■□□□□ 0.4
LIME1-208ENST00000493265 NAP1L3Q99457 506 aaPredicted RBP17.54■□□□□ 0.4
LIME1-208ENST00000493265 ERVW-1Q9UQF0 538 aa17.54■□□□□ 0.4
LIME1-208ENST00000493265 MRPS17Q9Y2R5 130 aaKnown RBP17.54■□□□□ 0.4
LIME1-208ENST00000493265 MTF2Q9Y483 593 aaPredicted RBP17.54■□□□□ 0.4
LIME1-208ENST00000493265 RAD54BQ9Y620 910 aa17.54■□□□□ 0.4
LIME1-208ENST00000493265 NUP205Q92621 2012 aa17.54■□□□□ 0.4
LIME1-208ENST00000493265 EP300Q09472 2414 aaPredicted RBP17.53■□□□□ 0.4
LIME1-208ENST00000493265 KANSL1LA0AUZ9 987 aa17.53■□□□□ 0.4
LIME1-208ENST00000493265 K7ERQ8 282 aa17.53■□□□□ 0.4
LIME1-208ENST00000493265 NCAM2O15394 837 aa17.53■□□□□ 0.4
LIME1-208ENST00000493265 MAFKO60675 156 aa17.53■□□□□ 0.4
LIME1-208ENST00000493265 PRAMEF11O60813 436 aa17.53■□□□□ 0.4
LIME1-208ENST00000493265 ZMPSTE24O75844 475 aa17.53■□□□□ 0.4
LIME1-208ENST00000493265 MT-CO1P00395 513 aa17.53■□□□□ 0.4
LIME1-208ENST00000493265 DLDP09622 509 aaKnown RBP17.53■□□□□ 0.4
LIME1-208ENST00000493265 RBP3P10745 1247 aa17.53■□□□□ 0.4
LIME1-208ENST00000493265 WASP42768 502 aa17.53■□□□□ 0.4
LIME1-208ENST00000493265 TNFRSF4P43489 277 aa17.53■□□□□ 0.4
LIME1-208ENST00000493265 ARF5P84085 180 aa17.53■□□□□ 0.4
LIME1-208ENST00000493265 SULT2A1Q06520 285 aa17.53■□□□□ 0.4
LIME1-208ENST00000493265 IL10RBQ08334 325 aa17.53■□□□□ 0.4
LIME1-208ENST00000493265 EIF4HQ15056 248 aaKnown RBP17.53■□□□□ 0.4
LIME1-208ENST00000493265 SIX1Q15475 284 aaPredicted RBP17.53■□□□□ 0.4
LIME1-208ENST00000493265 ACCSLQ4AC99 568 aa17.53■□□□□ 0.4
LIME1-208ENST00000493265 EGFLAMQ63HQ2 1017 aa17.53■□□□□ 0.4
LIME1-208ENST00000493265 RETSATQ6NUM9 610 aa17.53■□□□□ 0.4
LIME1-208ENST00000493265 ATP11CQ8NB49 1132 aa17.53■□□□□ 0.4
LIME1-208ENST00000493265 TFB1MQ8WVM0 346 aaKnown RBP17.53■□□□□ 0.4
LIME1-208ENST00000493265 ACDQ96AP0 544 aa17.53■□□□□ 0.4
LIME1-208ENST00000493265 UBA2Q9UBT2 640 aaPredicted RBP17.53■□□□□ 0.4
LIME1-208ENST00000493265 SLCO3A1Q9UIG8 710 aa17.53■□□□□ 0.4
LIME1-208ENST00000493265 TTC7AQ9ULT0 858 aaPredicted RBP17.53■□□□□ 0.4
LIME1-208ENST00000493265 PLA2G4CQ9UP65 541 aa17.53■□□□□ 0.4
LIME1-208ENST00000493265 FANCMQ8IYD8 2048 aa17.52■□□□□ 0.4
LIME1-208ENST00000493265 FAM170BA6NMN3 283 aa17.52■□□□□ 0.4
LIME1-208ENST00000493265 KCNK1O00180 336 aa17.52■□□□□ 0.4
LIME1-208ENST00000493265 PDE2AO00408 941 aaPredicted RBP17.52■□□□□ 0.4
LIME1-208ENST00000493265 TIMM44O43615 452 aa17.52■□□□□ 0.4
LIME1-208ENST00000493265 LMNAP02545 664 aaKnown RBP17.52■□□□□ 0.4
LIME1-208ENST00000493265 ASLP04424 464 aa17.52■□□□□ 0.4
LIME1-208ENST00000493265 TARSP26639 723 aaKnown RBP17.52■□□□□ 0.4
LIME1-208ENST00000493265 STARD6P59095 220 aa17.52■□□□□ 0.4
LIME1-208ENST00000493265 ST8SIA6P61647 398 aa17.52■□□□□ 0.4
LIME1-208ENST00000493265 ERMP1Q7Z2K6 904 aa17.52■□□□□ 0.4
LIME1-208ENST00000493265 CCDC13Q8IYE1 715 aa17.52■□□□□ 0.4
LIME1-208ENST00000493265 ZNF366Q8N895 744 aa17.52■□□□□ 0.4
LIME1-208ENST00000493265 ZNF513Q8N8E2 541 aaPredicted RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms