RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 SMIM22K7EJ46 135 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 SMIM10L2AP0DMW4 78 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 SMIM10L2BP0DMW5 78 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 PIK3R1P27986 724 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 ST13P50502 369 aaKnown RBP16.53■□□□□ 0.24
BRAT1-206ENST00000493232 FGD3Q5JSP0 725 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 INTS11Q5TA45 600 aaKnown RBP16.53■□□□□ 0.24
BRAT1-206ENST00000493232 MACC1Q6ZN28 852 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 KCNK18Q7Z418 384 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 PALB2Q86YC2 1186 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 CAMKK1Q8N5S9 505 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.53■□□□□ 0.242e-11■■■■■ 64.9
BRAT1-206ENST00000493232 MYPNQ86TC9 1320 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 MST1RQ04912 1400 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 CENPXA8MT69 81 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 LBPP18428 481 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 ITGA1P56199 1179 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 STXBP5Q5T5C0 1151 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 LYPLAL1Q5VWZ2 237 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 AFTPHQ6ULP2 937 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 SLC9A9Q8IVB4 645 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 ITFG1Q8TB96 612 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 FAM198AQ9UFP1 575 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 SNX6Q9UNH7 406 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 SMIM31A0A1B0GVY4 71 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 SGTAO43765 313 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 COX7A2P14406 83 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 MYL12AP19105 171 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 GDPD5Q8WTR4 605 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 DLG3Q92796 817 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 CENPTQ96BT3 561 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 RNF145Q96MT1 663 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 FBXL21Q9UKT6 434 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 SORCS3Q9UPU3 1222 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 TBC1D3BA6NDS4 549 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 LRRC10BA6NIK2 292 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 H3BQF6 201 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 TBC1D12O60347 775 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 ATP6V1G2O95670 118 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 VAV1P15498 845 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 CES5AQ6NT32 575 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 ST13P5Q8NFI4 369 aaPredicted RBP16.53■□□□□ 0.24
BRAT1-206ENST00000493232 ZYG11BQ9C0D3 744 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 POLR1DQ9Y2S0 133 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 PCDHA11Q9Y5I1 949 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 PTCH2Q9Y6C5 1203 aa16.53■□□□□ 0.24
BRAT1-206ENST00000493232 PXDNQ92626 1479 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 CCDC189A1A4V9 331 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 SNUPNO95149 360 aaKnown RBP16.52■□□□□ 0.24
BRAT1-206ENST00000493232 PIGNO95427 931 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 IRF8Q02556 426 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 SPIDRQ14159 915 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 ZNF621Q6ZSS3 439 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 OR6Y1Q8NGX8 325 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 SLITRK2Q9H156 845 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 ASAH2Q9NR71 780 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 C1QTNF3-AMACRE9PGA6 284 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 H3BN98 237 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 RECQL5O94762 991 aaPredicted RBP16.52■□□□□ 0.24
BRAT1-206ENST00000493232 PSMB4P28070 264 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 TLX1P31314 330 aaPredicted RBP16.52■□□□□ 0.24
BRAT1-206ENST00000493232 ST3GAL1Q11201 340 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 INSCQ1MX18 579 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 ZC3H12AQ5D1E8 599 aaKnown RBP16.52■□□□□ 0.24
BRAT1-206ENST00000493232 OTUD3Q5T2D3 398 aaPredicted RBP16.52■□□□□ 0.24
BRAT1-206ENST00000493232 FAM183BPQ6ZVS7 135 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 OR8H2Q8N162 312 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 ANKRD52Q8NB46 1076 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 ELMO3Q96BJ8 720 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 SLC39A8Q9C0K1 460 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 EPB41L4BQ9H329 900 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 TSC22D4Q9Y3Q8 395 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 PREX1Q8TCU6 1659 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 ZSCAN5CA6NGD5 496 aaPredicted RBP16.52■□□□□ 0.24
BRAT1-206ENST00000493232 HS6ST1O60243 411 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 ATP9AO75110 1047 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 TTPAP49638 278 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 SLC44A4Q53GD3 710 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 NOMO2Q5JPE7 1267 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 TPGS1Q6ZTW0 290 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 C16orf62Q7Z3J2 963 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 CLYBLQ8N0X4 340 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 ATP13A3Q9H7F0 1226 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.52■□□□□ 0.24
BRAT1-206ENST00000493232 NFKBIL1Q9UBC1 381 aaPredicted RBP16.52■□□□□ 0.24
BRAT1-206ENST00000493232 INVSQ9Y283 1065 aa16.52■□□□□ 0.24
BRAT1-206ENST00000493232 GNRH1P01148 92 aa16.52■□□□□ 0.23
BRAT1-206ENST00000493232 CTSEP14091 401 aa16.52■□□□□ 0.23
BRAT1-206ENST00000493232 STK32CQ86UX6 486 aa16.52■□□□□ 0.23
BRAT1-206ENST00000493232 ZFPM1Q8IX07 1006 aa16.52■□□□□ 0.23
BRAT1-206ENST00000493232 KIAA0319LQ8IZA0 1049 aa16.52■□□□□ 0.23
BRAT1-206ENST00000493232 TMEM199Q8N511 208 aa16.52■□□□□ 0.23
BRAT1-206ENST00000493232 TMEM161BQ8NDZ6 487 aa16.52■□□□□ 0.23
BRAT1-206ENST00000493232 NACC2Q96BF6 587 aa16.52■□□□□ 0.23
BRAT1-206ENST00000493232 WDR18Q9BV38 432 aa16.52■□□□□ 0.23
BRAT1-206ENST00000493232 NR2E3Q9Y5X4 410 aa16.52■□□□□ 0.23
BRAT1-206ENST00000493232 TPP1O14773 563 aa16.51■□□□□ 0.23
BRAT1-206ENST00000493232 KCNH1O95259 989 aa16.51■□□□□ 0.23
BRAT1-206ENST00000493232 GJB6O95452 261 aa16.51■□□□□ 0.23
BRAT1-206ENST00000493232 ATP4AP20648 1035 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms